RNA–Protein interactions for RNA: ENST00000262056.13

EIF4B-201, Transcript of eukaryotic translation initiation factor 4B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EIF4B, Length 4,148 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4B-201ENST00000262056 NISCHQ9Y2I1 1504 aa16.01■□□□□ 0.15
EIF4B-201ENST00000262056 DCAF8L2P0C7V8 631 aa14.94□□□□□ -0.02
EIF4B-201ENST00000262056 ABCC9O60706 1549 aa14.09□□□□□ -0.15
EIF4B-201ENST00000262056 SHROOM4Q9ULL8 1493 aa13.98□□□□□ -0.17
EIF4B-201ENST00000262056 CCDC180Q9P1Z9 1646 aa13.63□□□□□ -0.23
EIF4B-201ENST00000262056 SUPT5HO00267 1087 aaKnown RBP13.59□□□□□ -0.23
EIF4B-201ENST00000262056 PABPN1Q86U42 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
EIF4B-201ENST00000262056 ZCCHC6Q5VYS8 1495 aaKnown RBP13.26□□□□□ -0.29
EIF4B-201ENST00000262056 RB1CC1Q8TDY2 1594 aa13.17□□□□□ -0.3
EIF4B-201ENST00000262056 SCRIBQ14160 1630 aa13.15□□□□□ -0.3
EIF4B-201ENST00000262056 NACADO15069 1562 aa13.08□□□□□ -0.32
EIF4B-201ENST00000262056 EHMT2Q96KQ7 1210 aa12.96□□□□□ -0.33
EIF4B-201ENST00000262056 DCAF1Q9Y4B6 1507 aa12.84□□□□□ -0.35
EIF4B-201ENST00000262056 PCGF6Q9BYE7 350 aa12.81□□□□□ -0.36
EIF4B-201ENST00000262056 FAM9AQ8IZU1 332 aaPredicted RBP12.73□□□□□ -0.37
EIF4B-201ENST00000262056 MYO15BQ96JP2 1530 aa12.71□□□□□ -0.37
EIF4B-201ENST00000262056 PPARGC1BQ86YN6 1023 aaKnown RBP12.66□□□□□ -0.38
EIF4B-201ENST00000262056 CECR2Q9BXF3 1484 aa12.65□□□□□ -0.38
EIF4B-201ENST00000262056 TRIM41Q8WV44 630 aa12.63□□□□□ -0.39
EIF4B-201ENST00000262056 HRCP23327 699 aa12.62□□□□□ -0.39
EIF4B-201ENST00000262056 RANGAP1P46060 587 aaPredicted RBP12.54□□□□□ -0.4
EIF4B-201ENST00000262056 DNAJC5BQ9UF47 199 aa12.52□□□□□ -0.41
EIF4B-201ENST00000262056 CHIC1Q5VXU3 224 aa12.51□□□□□ -0.41
EIF4B-201ENST00000262056 RSF1Q96T23 1441 aaPredicted RBP12.5□□□□□ -0.41
EIF4B-201ENST00000262056 BAZ1BQ9UIG0 1483 aaKnown RBP12.48□□□□□ -0.41
EIF4B-201ENST00000262056 LOC105371045A0A1W2PR82 267 aa12.47□□□□□ -0.41
EIF4B-201ENST00000262056 BAZ1AQ9NRL2 1556 aaPredicted RBP12.46□□□□□ -0.42
EIF4B-201ENST00000262056 TTBK1Q5TCY1 1321 aaPredicted RBP12.44□□□□□ -0.42
EIF4B-201ENST00000262056 MROH2BQ7Z745 1585 aa12.43□□□□□ -0.42
EIF4B-201ENST00000262056 FBLN2P98095 1184 aa12.38□□□□□ -0.43
EIF4B-201ENST00000262056 BICRAQ9NZM4 1560 aa12.37□□□□□ -0.43
EIF4B-201ENST00000262056 UBTFP17480 764 aaKnown RBP12.35□□□□□ -0.43
EIF4B-201ENST00000262056 EIF4G1Q04637 1599 aaKnown RBP12.34□□□□□ -0.43
EIF4B-201ENST00000262056 ERCC6Q03468 1493 aa12.32□□□□□ -0.44
EIF4B-201ENST00000262056 ATAD2BQ9ULI0 1458 aa12.32□□□□□ -0.44
EIF4B-201ENST00000262056 ATP1B4Q9UN42 357 aaPredicted RBP12.3□□□□□ -0.44
EIF4B-201ENST00000262056 SMARCA2P51531 1590 aa12.29□□□□□ -0.44
EIF4B-201ENST00000262056 SMARCA4P51532 1647 aa12.26□□□□□ -0.45
EIF4B-201ENST00000262056 UNC13AQ9UPW8 1703 aa12.26□□□□□ -0.45
EIF4B-201ENST00000262056 WIZO95785 1651 aa12.25□□□□□ -0.45
EIF4B-201ENST00000262056 CC2D2AQ9P2K1 1620 aa12.24□□□□□ -0.45
EIF4B-201ENST00000262056 TRIM26Q12899 539 aaPredicted RBP12.17□□□□□ -0.46
EIF4B-201ENST00000262056 APLP2Q06481 763 aa12.16□□□□□ -0.46
EIF4B-201ENST00000262056 CCDC88BA6NC98 1476 aa12.16□□□□□ -0.46
EIF4B-201ENST00000262056 NCAPD3P42695 1498 aa12.15□□□□□ -0.46
EIF4B-201ENST00000262056 CADPSQ9ULU8 1353 aa12.14□□□□□ -0.47
EIF4B-201ENST00000262056 PDS5BQ9NTI5 1447 aa12.12□□□□□ -0.47
EIF4B-201ENST00000262056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.11□□□□□ -0.47
EIF4B-201ENST00000262056 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
EIF4B-201ENST00000262056 TOP2AP11388 1531 aaKnown RBP12.08□□□□□ -0.48
EIF4B-201ENST00000262056 CHMP7Q8WUX9 453 aaPredicted RBP12.05□□□□□ -0.48
EIF4B-201ENST00000262056 NESP48681 1621 aa12.05□□□□□ -0.48
EIF4B-201ENST00000262056 WRNQ14191 1432 aaPredicted RBP eCLIP12.03□□□□□ -0.48
EIF4B-201ENST00000262056 P3H3Q8IVL6 736 aa12.01□□□□□ -0.49
EIF4B-201ENST00000262056 CSRNP3Q8WYN3 585 aa12.01□□□□□ -0.49
EIF4B-201ENST00000262056 ARID3CA6NKF2 412 aa11.98□□□□□ -0.49
EIF4B-201ENST00000262056 FANCD2Q9BXW9 1451 aa11.98□□□□□ -0.49
EIF4B-201ENST00000262056 ZEB1P37275 1124 aaPredicted RBP11.98□□□□□ -0.49
EIF4B-201ENST00000262056 CEP164Q9UPV0 1460 aa11.97□□□□□ -0.49
EIF4B-201ENST00000262056 CCER1Q8TC90 406 aaPredicted RBP11.96□□□□□ -0.49
EIF4B-201ENST00000262056 TDRD9Q8NDG6 1382 aaKnown RBP11.95□□□□□ -0.5
EIF4B-201ENST00000262056 HMGXB3Q12766 1538 aa11.93□□□□□ -0.5
EIF4B-201ENST00000262056 ABCC8Q09428 1581 aa11.92□□□□□ -0.5
EIF4B-201ENST00000262056 SCAF1Q9H7N4 1312 aaKnown RBP11.9□□□□□ -0.5
EIF4B-201ENST00000262056 SOGA1O94964 1423 aa11.9□□□□□ -0.5
EIF4B-201ENST00000262056 PELP1Q8IZL8 1130 aaKnown RBP11.88□□□□□ -0.51
EIF4B-201ENST00000262056 YTHDC1Q96MU7 727 aaKnown RBP11.88□□□□□ -0.51
EIF4B-201ENST00000262056 CUX2O14529 1486 aa11.87□□□□□ -0.51
EIF4B-201ENST00000262056 MYT1LQ9UL68 1186 aa11.85□□□□□ -0.51
EIF4B-201ENST00000262056 CFTRP13569 1480 aa11.84□□□□□ -0.51
EIF4B-201ENST00000262056 KIF27Q86VH2 1401 aa11.83□□□□□ -0.52
EIF4B-201ENST00000262056 NPM1P06748 294 aaKnown RBP eCLIP11.78□□□□□ -0.52
EIF4B-201ENST00000262056 ITGAEP38570 1179 aa11.78□□□□□ -0.52
EIF4B-201ENST00000262056 RAD54L2Q9Y4B4 1467 aa11.78□□□□□ -0.52
EIF4B-201ENST00000262056 PEG3Q9GZU2 1588 aa11.77□□□□□ -0.53
EIF4B-201ENST00000262056 CENPBP07199 599 aaPredicted RBP11.76□□□□□ -0.53
EIF4B-201ENST00000262056 GTF3C3Q9Y5Q9 886 aa11.75□□□□□ -0.53
EIF4B-201ENST00000262056 MRC2Q9UBG0 1479 aa11.74□□□□□ -0.53
EIF4B-201ENST00000262056 AQRO60306 1485 aaKnown RBP eCLIP11.74□□□□□ -0.534e-7■■■■□ 22.8
EIF4B-201ENST00000262056 FGD5Q6ZNL6 1462 aa11.74□□□□□ -0.53
EIF4B-201ENST00000262056 CARMIL1Q5VZK9 1371 aa11.73□□□□□ -0.53
EIF4B-201ENST00000262056 NEUROD1Q13562 356 aa11.72□□□□□ -0.53
EIF4B-201ENST00000262056 DIEXFQ68CQ4 756 aaKnown RBP11.72□□□□□ -0.53
EIF4B-201ENST00000262056 LAMC3Q9Y6N6 1575 aa11.72□□□□□ -0.53
EIF4B-201ENST00000262056 OSCARQ8IYS5 282 aa11.71□□□□□ -0.53
EIF4B-201ENST00000262056 ACIN1Q9UKV3 1341 aaKnown RBP11.68□□□□□ -0.54
EIF4B-201ENST00000262056 TOPBP1Q92547 1522 aa11.67□□□□□ -0.54
EIF4B-201ENST00000262056 TRHP20396 242 aaPredicted RBP11.66□□□□□ -0.54
EIF4B-201ENST00000262056 CYB5RLQ6IPT4 315 aa11.66□□□□□ -0.54
EIF4B-201ENST00000262056 KCNH8Q96L42 1107 aa11.66□□□□□ -0.54
EIF4B-201ENST00000262056 GAPVD1Q14C86 1478 aa11.63□□□□□ -0.55
EIF4B-201ENST00000262056 RUSC2Q8N2Y8 1516 aa11.63□□□□□ -0.55
EIF4B-201ENST00000262056 ZNF777Q9ULD5 760 aaPredicted RBP11.63□□□□□ -0.55
EIF4B-201ENST00000262056 POLA1P09884 1462 aaPredicted RBP11.63□□□□□ -0.55
EIF4B-201ENST00000262056 EEA1Q15075 1411 aa11.62□□□□□ -0.55
EIF4B-201ENST00000262056 JPH4Q96JJ6 628 aa11.61□□□□□ -0.55
EIF4B-201ENST00000262056 FAM50AQ14320 339 aaKnown RBP11.6□□□□□ -0.55
EIF4B-201ENST00000262056 URB2Q14146 1524 aaKnown RBP11.6□□□□□ -0.55
EIF4B-201ENST00000262056 CDK11AQ9UQ88 783 aaPredicted RBP11.6□□□□□ -0.55
EIF4B-201ENST00000262056 CUX1P39880 1505 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms