RNA–Protein interactions for RNA: ENST00000260379.10

RPLP1-201, Transcript of ribosomal protein lateral stalk subunit P1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPLP1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP1-201ENST00000260379 NISCHQ9Y2I1 1504 aa24.76■■□□□ 1.55
RPLP1-201ENST00000260379 AEBP2Q6ZN18 517 aaPredicted RBP23.01■■□□□ 1.27
RPLP1-201ENST00000260379 CCDC180Q9P1Z9 1646 aa22.02■■□□□ 1.12
RPLP1-201ENST00000260379 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
RPLP1-201ENST00000260379 ABCC9O60706 1549 aa21.53■■□□□ 1.04
RPLP1-201ENST00000260379 RB1CC1Q8TDY2 1594 aa20.72■□□□□ 0.91
RPLP1-201ENST00000260379 NACADO15069 1562 aa20.7■□□□□ 0.9
RPLP1-201ENST00000260379 ZCCHC6Q5VYS8 1495 aaKnown RBP20.65■□□□□ 0.9
RPLP1-201ENST00000260379 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
RPLP1-201ENST00000260379 MYO15BQ96JP2 1530 aa20.59■□□□□ 0.89
RPLP1-201ENST00000260379 DCAF1Q9Y4B6 1507 aa20.51■□□□□ 0.87
RPLP1-201ENST00000260379 UNC13AQ9UPW8 1703 aa20.25■□□□□ 0.83
RPLP1-201ENST00000260379 BICRAQ9NZM4 1560 aa20.1■□□□□ 0.81
RPLP1-201ENST00000260379 PABPN1Q86U42 306 aaKnown RBP eCLIP20.1■□□□□ 0.81
RPLP1-201ENST00000260379 SCRIBQ14160 1630 aa20.09■□□□□ 0.81
RPLP1-201ENST00000260379 SHROOM4Q9ULL8 1493 aa19.9■□□□□ 0.78
RPLP1-201ENST00000260379 DNAJC5BQ9UF47 199 aa19.76■□□□□ 0.75
RPLP1-201ENST00000260379 SENP3Q9H4L4 574 aaPredicted RBP19.59■□□□□ 0.73
RPLP1-201ENST00000260379 EIF4G1Q04637 1599 aaKnown RBP19.57■□□□□ 0.72
RPLP1-201ENST00000260379 CC2D2AQ9P2K1 1620 aa19.48■□□□□ 0.71
RPLP1-201ENST00000260379 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
RPLP1-201ENST00000260379 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
RPLP1-201ENST00000260379 SMARCA4P51532 1647 aa19.22■□□□□ 0.67
RPLP1-201ENST00000260379 BAZ1AQ9NRL2 1556 aaPredicted RBP19.19■□□□□ 0.66
RPLP1-201ENST00000260379 ATAD2BQ9ULI0 1458 aa19.12■□□□□ 0.65
RPLP1-201ENST00000260379 NCAPD3P42695 1498 aa19.1■□□□□ 0.65
RPLP1-201ENST00000260379 SMARCA2P51531 1590 aa19.09■□□□□ 0.65
RPLP1-201ENST00000260379 MROH2BQ7Z745 1585 aa19.09■□□□□ 0.65
RPLP1-201ENST00000260379 PEG3Q9GZU2 1588 aa19.05■□□□□ 0.64
RPLP1-201ENST00000260379 HMGXB3Q12766 1538 aa19.02■□□□□ 0.64
RPLP1-201ENST00000260379 BAZ1BQ9UIG0 1483 aaKnown RBP18.96■□□□□ 0.63
RPLP1-201ENST00000260379 WIZO95785 1651 aa18.87■□□□□ 0.61
RPLP1-201ENST00000260379 RSF1Q96T23 1441 aaPredicted RBP18.87■□□□□ 0.61
RPLP1-201ENST00000260379 TOP2AP11388 1531 aaKnown RBP18.69■□□□□ 0.58
RPLP1-201ENST00000260379 NESP48681 1621 aa18.63■□□□□ 0.57
RPLP1-201ENST00000260379 LAMC3Q9Y6N6 1575 aa18.59■□□□□ 0.57
RPLP1-201ENST00000260379 ERCC6Q03468 1493 aa18.55■□□□□ 0.56
RPLP1-201ENST00000260379 CADPSQ9ULU8 1353 aa18.54■□□□□ 0.56
RPLP1-201ENST00000260379 CCDC88BA6NC98 1476 aa18.46■□□□□ 0.55
RPLP1-201ENST00000260379 PDS5BQ9NTI5 1447 aa18.46■□□□□ 0.55
RPLP1-201ENST00000260379 CFTRP13569 1480 aa18.44■□□□□ 0.54
RPLP1-201ENST00000260379 KIF21AQ7Z4S6 1674 aa18.41■□□□□ 0.54
RPLP1-201ENST00000260379 THOC2Q8NI27 1593 aaKnown RBP18.38■□□□□ 0.53
RPLP1-201ENST00000260379 CUX2O14529 1486 aa18.37■□□□□ 0.53
RPLP1-201ENST00000260379 SUPT5HO00267 1087 aaKnown RBP18.35■□□□□ 0.53
RPLP1-201ENST00000260379 FANCD2Q9BXW9 1451 aa18.33■□□□□ 0.53
RPLP1-201ENST00000260379 CEP164Q9UPV0 1460 aa18.3■□□□□ 0.52
RPLP1-201ENST00000260379 PRDM2Q13029 1718 aa18.29■□□□□ 0.52
RPLP1-201ENST00000260379 MRC2Q9UBG0 1479 aa18.28■□□□□ 0.52
RPLP1-201ENST00000260379 FOXD1Q16676 465 aa18.26■□□□□ 0.51
RPLP1-201ENST00000260379 WDR62O43379 1518 aa18.23■□□□□ 0.51
RPLP1-201ENST00000260379 URB2Q14146 1524 aaKnown RBP18.15■□□□□ 0.5
RPLP1-201ENST00000260379 TOPBP1Q92547 1522 aa18.04■□□□□ 0.48
RPLP1-201ENST00000260379 ABCC8Q09428 1581 aa18.02■□□□□ 0.48
RPLP1-201ENST00000260379 DNMBPQ6XZF7 1577 aa18.02■□□□□ 0.48
RPLP1-201ENST00000260379 IFT140Q96RY7 1462 aa17.93■□□□□ 0.46
RPLP1-201ENST00000260379 CUX1P39880 1505 aa17.91■□□□□ 0.46
RPLP1-201ENST00000260379 POLA1P09884 1462 aaPredicted RBP17.88■□□□□ 0.45
RPLP1-201ENST00000260379 TARBP1Q13395 1621 aaKnown RBP17.85■□□□□ 0.45
RPLP1-201ENST00000260379 ZNF608Q9ULD9 1512 aaPredicted RBP17.84■□□□□ 0.45
RPLP1-201ENST00000260379 FGD5Q6ZNL6 1462 aa17.84■□□□□ 0.45
RPLP1-201ENST00000260379 RAD54L2Q9Y4B4 1467 aa17.81■□□□□ 0.44
RPLP1-201ENST00000260379 SOGA1O94964 1423 aa17.8■□□□□ 0.44
RPLP1-201ENST00000260379 WRNQ14191 1432 aaPredicted RBP eCLIP17.79■□□□□ 0.44
RPLP1-201ENST00000260379 DNAJC5Q9H3Z4 198 aa17.78■□□□□ 0.44
RPLP1-201ENST00000260379 EIF4G3O43432 1585 aaKnown RBP17.78■□□□□ 0.44
RPLP1-201ENST00000260379 TOP2BQ02880 1626 aa17.76■□□□□ 0.43
RPLP1-201ENST00000260379 BIVM-ERCC5R4GMW8 1640 aa17.76■□□□□ 0.43
RPLP1-201ENST00000260379 SYNJ1O43426 1573 aa17.75■□□□□ 0.43
RPLP1-201ENST00000260379 AQRO60306 1485 aaKnown RBP eCLIP17.74■□□□□ 0.434e-7■■■□□ 18.8
RPLP1-201ENST00000260379 WDR97A6NE52 1622 aa17.71■□□□□ 0.43
RPLP1-201ENST00000260379 TDRD9Q8NDG6 1382 aaKnown RBP17.69■□□□□ 0.42
RPLP1-201ENST00000260379 ABCA10Q8WWZ4 1543 aa17.68■□□□□ 0.42
RPLP1-201ENST00000260379 PLPPR3Q6T4P5 718 aa17.63■□□□□ 0.41
RPLP1-201ENST00000260379 ABCA5Q8WWZ7 1642 aa17.61■□□□□ 0.41
RPLP1-201ENST00000260379 GRIN2BQ13224 1484 aa17.6■□□□□ 0.41
RPLP1-201ENST00000260379 GAPVD1Q14C86 1478 aa17.6■□□□□ 0.41
RPLP1-201ENST00000260379 SNAPC4Q5SXM2 1469 aa17.58■□□□□ 0.41
RPLP1-201ENST00000260379 OSCARQ8IYS5 282 aa17.57■□□□□ 0.4
RPLP1-201ENST00000260379 PBRM1Q86U86 1689 aa17.57■□□□□ 0.4
RPLP1-201ENST00000260379 MAGI1Q96QZ7 1491 aaPredicted RBP17.56■□□□□ 0.4
RPLP1-201ENST00000260379 CHD1O14646 1710 aa17.54■□□□□ 0.4
RPLP1-201ENST00000260379 SYNJ2O15056 1496 aa17.49■□□□□ 0.39
RPLP1-201ENST00000260379 FBLN2P98095 1184 aa17.48■□□□□ 0.39
RPLP1-201ENST00000260379 ERICH3Q5RHP9 1530 aa17.47■□□□□ 0.39
RPLP1-201ENST00000260379 ADAMTS12P58397 1594 aa17.45■□□□□ 0.38
RPLP1-201ENST00000260379 CHMP7Q8WUX9 453 aaPredicted RBP17.44■□□□□ 0.38
RPLP1-201ENST00000260379 KIF27Q86VH2 1401 aa17.41■□□□□ 0.38
RPLP1-201ENST00000260379 FHAD1B1AJZ9 1412 aa17.4■□□□□ 0.38
RPLP1-201ENST00000260379 GRIN2AQ12879 1464 aa17.38■□□□□ 0.37
RPLP1-201ENST00000260379 CLASP1Q7Z460 1538 aa17.37■□□□□ 0.37
RPLP1-201ENST00000260379 IGF1RP08069 1367 aa17.34■□□□□ 0.37
RPLP1-201ENST00000260379 TRIM41Q8WV44 630 aa17.33■□□□□ 0.36
RPLP1-201ENST00000260379 ARHGEF11O15085 1522 aa17.32■□□□□ 0.36
RPLP1-201ENST00000260379 RIMBP3CA6NJZ7 1639 aa17.32■□□□□ 0.36
RPLP1-201ENST00000260379 RIMBP3BA6NNM3 1639 aa17.32■□□□□ 0.36
RPLP1-201ENST00000260379 RIMBP3Q9UFD9 1639 aa17.32■□□□□ 0.36
RPLP1-201ENST00000260379 NUP160Q12769 1436 aa17.31■□□□□ 0.36
RPLP1-201ENST00000260379 CUL7Q14999 1698 aa17.3■□□□□ 0.36
RPLP1-201ENST00000260379 CEP170Q5SW79 1584 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms