RNA–Protein interactions for RNA: ENST00000255390.9

SCO1-201, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCO1, Length 9,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-201ENST00000255390 DCAF8L2P0C7V8 631 aa19.36■□□□□ 0.69
SCO1-201ENST00000255390 PELP1Q8IZL8 1130 aaKnown RBP18.6■□□□□ 0.57
SCO1-201ENST00000255390 EHMT2Q96KQ7 1210 aa18.01■□□□□ 0.47
SCO1-201ENST00000255390 FAM9AQ8IZU1 332 aaPredicted RBP17.98■□□□□ 0.47
SCO1-201ENST00000255390 SUPT5HO00267 1087 aaKnown RBP17.92■□□□□ 0.46
SCO1-201ENST00000255390 ERICH6Q7L0X2 663 aa17.89■□□□□ 0.45
SCO1-201ENST00000255390 APLP2Q06481 763 aa17.89■□□□□ 0.45
SCO1-201ENST00000255390 CCER1Q8TC90 406 aaPredicted RBP17.75■□□□□ 0.43
SCO1-201ENST00000255390 TTBK1Q5TCY1 1321 aaPredicted RBP17.42■□□□□ 0.38
SCO1-201ENST00000255390 SHROOM4Q9ULL8 1493 aa17.39■□□□□ 0.37
SCO1-201ENST00000255390 ATP1B4Q9UN42 357 aaPredicted RBP17.32■□□□□ 0.36
SCO1-201ENST00000255390 CENPBP07199 599 aaPredicted RBP17.24■□□□□ 0.35
SCO1-201ENST00000255390 RANGAP1P46060 587 aaPredicted RBP17.24■□□□□ 0.35
SCO1-201ENST00000255390 MYT1Q01538 1121 aa17.22■□□□□ 0.35
SCO1-201ENST00000255390 NEFLP07196 543 aa17.19■□□□□ 0.34
SCO1-201ENST00000255390 PCGF6Q9BYE7 350 aa17.12■□□□□ 0.33
SCO1-201ENST00000255390 DAXXQ9UER7 740 aaPredicted RBP17.12■□□□□ 0.33
SCO1-201ENST00000255390 YTHDC1Q96MU7 727 aaKnown RBP17.01■□□□□ 0.31
SCO1-201ENST00000255390 MYT1LQ9UL68 1186 aa16.99■□□□□ 0.31
SCO1-201ENST00000255390 CHIC1Q5VXU3 224 aa16.79■□□□□ 0.28
SCO1-201ENST00000255390 POLR3GLQ9BT43 218 aa16.78■□□□□ 0.28
SCO1-201ENST00000255390 ZEB1P37275 1124 aaPredicted RBP16.76■□□□□ 0.27
SCO1-201ENST00000255390 SLC4A1APQ9BWU0 796 aaKnown RBP16.74■□□□□ 0.27
SCO1-201ENST00000255390 UBTFP17480 764 aaKnown RBP16.72■□□□□ 0.27
SCO1-201ENST00000255390 ZNF316A6NFI3 1004 aaPredicted RBP16.62■□□□□ 0.25
SCO1-201ENST00000255390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.61■□□□□ 0.25
SCO1-201ENST00000255390 HNRNPUL2Q1KMD3 747 aaKnown RBP16.61■□□□□ 0.25
SCO1-201ENST00000255390 CLSPNQ9HAW4 1339 aa16.57■□□□□ 0.24
SCO1-201ENST00000255390 CNGB1Q14028 1251 aaPredicted RBP16.56■□□□□ 0.24
SCO1-201ENST00000255390 TRIM41Q8WV44 630 aa16.55■□□□□ 0.24
SCO1-201ENST00000255390 NISCHQ9Y2I1 1504 aa16.48■□□□□ 0.23
SCO1-201ENST00000255390 RTL5Q5HYW3 569 aaPredicted RBP16.46■□□□□ 0.23
SCO1-201ENST00000255390 ITGAEP38570 1179 aa16.39■□□□□ 0.21
SCO1-201ENST00000255390 SLC24A1O60721 1099 aa16.35■□□□□ 0.21
SCO1-201ENST00000255390 ZBTB47Q9UFB7 747 aaPredicted RBP16.34■□□□□ 0.21
SCO1-201ENST00000255390 PPARGC1BQ86YN6 1023 aaKnown RBP16.28■□□□□ 0.2
SCO1-201ENST00000255390 BCL11AQ9H165 835 aa16.21■□□□□ 0.19
SCO1-201ENST00000255390 BCANQ96GW7 911 aa16.09■□□□□ 0.17
SCO1-201ENST00000255390 CANXP27824 592 aaKnown RBP16.02■□□□□ 0.16
SCO1-201ENST00000255390 NEFMP07197 916 aa16■□□□□ 0.15
SCO1-201ENST00000255390 TRIM52Q96A61 297 aa15.9■□□□□ 0.14
SCO1-201ENST00000255390 TRIM26Q12899 539 aaPredicted RBP15.87■□□□□ 0.13
SCO1-201ENST00000255390 FAM50AQ14320 339 aaKnown RBP15.86■□□□□ 0.13
SCO1-201ENST00000255390 ZNF326Q5BKZ1 582 aaKnown RBP15.85■□□□□ 0.13
SCO1-201ENST00000255390 ANP32BQ92688 251 aaKnown RBP15.84■□□□□ 0.13
SCO1-201ENST00000255390 CDK11BP21127 795 aaKnown RBP15.81■□□□□ 0.12
SCO1-201ENST00000255390 CDK11AQ9UQ88 783 aaPredicted RBP15.81■□□□□ 0.12
SCO1-201ENST00000255390 HSP90AA1P07900 732 aaKnown RBP15.77■□□□□ 0.11
SCO1-201ENST00000255390 HRCP23327 699 aa15.75■□□□□ 0.11
SCO1-201ENST00000255390 NEUROD1Q13562 356 aa15.74■□□□□ 0.11
SCO1-201ENST00000255390 GLIPR1L2Q4G1C9 344 aa15.73■□□□□ 0.11
SCO1-201ENST00000255390 EIF5BO60841 1220 aaKnown RBP15.73■□□□□ 0.11
SCO1-201ENST00000255390 ESF1Q9H501 851 aaKnown RBP15.72■□□□□ 0.11
SCO1-201ENST00000255390 PLPPR3Q6T4P5 718 aa15.71■□□□□ 0.1
SCO1-201ENST00000255390 ANP32CO43423 234 aa15.67■□□□□ 0.1
SCO1-201ENST00000255390 FBLN2P98095 1184 aa15.65■□□□□ 0.1
SCO1-201ENST00000255390 ANP32AP39687 249 aaKnown RBP15.64■□□□□ 0.09
SCO1-201ENST00000255390 A0A0G2JS52 829 aa15.63■□□□□ 0.09
SCO1-201ENST00000255390 DIEXFQ68CQ4 756 aaKnown RBP15.63■□□□□ 0.09
SCO1-201ENST00000255390 STAG3Q9UJ98 1225 aa15.59■□□□□ 0.09
SCO1-201ENST00000255390 NPM2Q86SE8 214 aaKnown RBP15.58■□□□□ 0.08
SCO1-201ENST00000255390 SCAF1Q9H7N4 1312 aaKnown RBP15.58■□□□□ 0.08
SCO1-201ENST00000255390 UPF2Q9HAU5 1272 aaKnown RBP15.55■□□□□ 0.08
SCO1-201ENST00000255390 TULP1O00294 542 aaPredicted RBP15.46■□□□□ 0.07
SCO1-201ENST00000255390 CHGAP10645 457 aaKnown RBP15.42■□□□□ 0.06
SCO1-201ENST00000255390 LOC105371045A0A1W2PR82 267 aa15.38■□□□□ 0.05
SCO1-201ENST00000255390 ARXQ96QS3 562 aa15.38■□□□□ 0.05
SCO1-201ENST00000255390 ZNF777Q9ULD5 760 aaPredicted RBP15.35■□□□□ 0.05
SCO1-201ENST00000255390 ARID3CA6NKF2 412 aa15.35■□□□□ 0.05
SCO1-201ENST00000255390 GTF3C3Q9Y5Q9 886 aa15.34■□□□□ 0.05
SCO1-201ENST00000255390 NCBP3Q53F19 620 aaKnown RBP15.32■□□□□ 0.04
SCO1-201ENST00000255390 PLEKHG5O94827 1062 aa15.3■□□□□ 0.04
SCO1-201ENST00000255390 ZBTB7CA1YPR0 619 aa15.3■□□□□ 0.04
SCO1-201ENST00000255390 MYH16Q9H6N6 1097 aa15.3■□□□□ 0.04
SCO1-201ENST00000255390 TNNT2P45379 298 aaPredicted RBP15.27■□□□□ 0.03
SCO1-201ENST00000255390 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.26■□□□□ 0.03
SCO1-201ENST00000255390 C14orf37Q86TY3 774 aa15.25■□□□□ 0.03
SCO1-201ENST00000255390 ZRSR1Q15695 479 aaKnown RBP15.24■□□□□ 0.03
SCO1-201ENST00000255390 NPM1P06748 294 aaKnown RBP eCLIP15.24■□□□□ 0.03
SCO1-201ENST00000255390 HAP1P54257 671 aaPredicted RBP15.23■□□□□ 0.03
SCO1-201ENST00000255390 NCLP19338 710 aaKnown RBP15.21■□□□□ 0.03
SCO1-201ENST00000255390 NPHP1O15259 732 aa15.21■□□□□ 0.02
SCO1-201ENST00000255390 SALL2Q9Y467 1007 aaPredicted RBP15.19■□□□□ 0.02
SCO1-201ENST00000255390 NBR1Q14596 966 aa15.17■□□□□ 0.02
SCO1-201ENST00000255390 P3H3Q8IVL6 736 aa15.15■□□□□ 0.02
SCO1-201ENST00000255390 TRIM44Q96DX7 344 aaPredicted RBP15.15■□□□□ 0.02
SCO1-201ENST00000255390 WDR43Q15061 677 aaKnown RBP eCLIP15.14■□□□□ 0.01
SCO1-201ENST00000255390 CLSTN1O94985 981 aa15.12■□□□□ 0.01
SCO1-201ENST00000255390 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.08■□□□□ 03e-7■□□□□ 9.7
SCO1-201ENST00000255390 FAM9BQ8IZU0 186 aa15.08■□□□□ 0
SCO1-201ENST00000255390 TPRNQ4KMQ1 711 aa15.07■□□□□ 0
SCO1-201ENST00000255390 TAOK2Q9UL54 1235 aa15.07■□□□□ 0
SCO1-201ENST00000255390 PABPN1Q86U42 306 aaKnown RBP eCLIP15.06■□□□□ 0
SCO1-201ENST00000255390 PTMAP06454 111 aaKnown RBP15.06■□□□□ 0
SCO1-201ENST00000255390 TMC1Q8TDI8 760 aa15.05■□□□□ 0
SCO1-201ENST00000255390 CCDC136Q96JN2 1154 aa15.05■□□□□ -0
SCO1-201ENST00000255390 DNTTIP2Q5QJE6 756 aaKnown RBP15.05■□□□□ -0
SCO1-201ENST00000255390 SENP3Q9H4L4 574 aaPredicted RBP15.04■□□□□ -0
SCO1-201ENST00000255390 GOLGA6L22H0YM25 854 aa15.04■□□□□ -0
SCO1-201ENST00000255390 HNRNPUQ00839 825 aaKnown RBP eCLIP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms