RNA–Protein interactions for RNA: ENST00000251607.10

TRNT1-201, Transcript of tRNA nucleotidyl transferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRNT1, Length 2,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNT1-201ENST00000251607 NISCHQ9Y2I1 1504 aa36.09■■■■□ 3.37
TRNT1-201ENST00000251607 CCDC180Q9P1Z9 1646 aa31.61■■■□□ 2.65
TRNT1-201ENST00000251607 ABCC9O60706 1549 aa30.4■■■□□ 2.46
TRNT1-201ENST00000251607 ZCCHC6Q5VYS8 1495 aaKnown RBP30.23■■■□□ 2.43
TRNT1-201ENST00000251607 DCAF8L2P0C7V8 631 aa30.08■■■□□ 2.41
TRNT1-201ENST00000251607 DCAF1Q9Y4B6 1507 aa29.75■■■□□ 2.35
TRNT1-201ENST00000251607 NACADO15069 1562 aa29.54■■■□□ 2.32
TRNT1-201ENST00000251607 MYO15BQ96JP2 1530 aa29.53■■■□□ 2.32
TRNT1-201ENST00000251607 RB1CC1Q8TDY2 1594 aa29.4■■■□□ 2.3
TRNT1-201ENST00000251607 SHROOM4Q9ULL8 1493 aa29.31■■■□□ 2.28
TRNT1-201ENST00000251607 SCRIBQ14160 1630 aa29.14■■■□□ 2.25
TRNT1-201ENST00000251607 UNC13AQ9UPW8 1703 aa28.9■■■□□ 2.22
TRNT1-201ENST00000251607 PABPN1Q86U42 306 aaKnown RBP eCLIP28.62■■■□□ 2.17
TRNT1-201ENST00000251607 BICRAQ9NZM4 1560 aa28.59■■■□□ 2.17
TRNT1-201ENST00000251607 CECR2Q9BXF3 1484 aa28.16■■■□□ 2.1
TRNT1-201ENST00000251607 SUPT5HO00267 1087 aaKnown RBP27.97■■■□□ 2.07
TRNT1-201ENST00000251607 MROH2BQ7Z745 1585 aa27.92■■■□□ 2.06
TRNT1-201ENST00000251607 BAZ1AQ9NRL2 1556 aaPredicted RBP27.88■■■□□ 2.05
TRNT1-201ENST00000251607 RSF1Q96T23 1441 aaPredicted RBP27.87■■■□□ 2.05
TRNT1-201ENST00000251607 SMARCA4P51532 1647 aa27.85■■■□□ 2.05
TRNT1-201ENST00000251607 EIF4G1Q04637 1599 aaKnown RBP27.75■■■□□ 2.03
TRNT1-201ENST00000251607 WIZO95785 1651 aa27.7■■■□□ 2.02
TRNT1-201ENST00000251607 ATAD2BQ9ULI0 1458 aa27.49■■□□□ 1.99
TRNT1-201ENST00000251607 PEG3Q9GZU2 1588 aa27.47■■□□□ 1.99
TRNT1-201ENST00000251607 CC2D2AQ9P2K1 1620 aa27.47■■□□□ 1.99
TRNT1-201ENST00000251607 SMARCA2P51531 1590 aa27.41■■□□□ 1.98
TRNT1-201ENST00000251607 BAZ1BQ9UIG0 1483 aaKnown RBP27.31■■□□□ 1.96
TRNT1-201ENST00000251607 TOP2AP11388 1531 aaKnown RBP27.31■■□□□ 1.96
TRNT1-201ENST00000251607 NCAPD3P42695 1498 aa27.28■■□□□ 1.96
TRNT1-201ENST00000251607 DNAJC5BQ9UF47 199 aa27.24■■□□□ 1.95
TRNT1-201ENST00000251607 HMGXB3Q12766 1538 aa27.2■■□□□ 1.94
TRNT1-201ENST00000251607 CCDC88BA6NC98 1476 aa27.07■■□□□ 1.92
TRNT1-201ENST00000251607 CFTRP13569 1480 aa26.59■■□□□ 1.85
TRNT1-201ENST00000251607 NESP48681 1621 aa26.58■■□□□ 1.85
TRNT1-201ENST00000251607 CADPSQ9ULU8 1353 aa26.58■■□□□ 1.85
TRNT1-201ENST00000251607 CHIC1Q5VXU3 224 aa26.5■■□□□ 1.83
TRNT1-201ENST00000251607 ABCC8Q09428 1581 aa26.44■■□□□ 1.82
TRNT1-201ENST00000251607 LAMC3Q9Y6N6 1575 aa26.42■■□□□ 1.82
TRNT1-201ENST00000251607 PRDM2Q13029 1718 aa26.41■■□□□ 1.82
TRNT1-201ENST00000251607 FANCD2Q9BXW9 1451 aa26.31■■□□□ 1.8
TRNT1-201ENST00000251607 TRIM41Q8WV44 630 aa26.26■■□□□ 1.79
TRNT1-201ENST00000251607 WRNQ14191 1432 aaPredicted RBP eCLIP26.23■■□□□ 1.79
TRNT1-201ENST00000251607 PDS5BQ9NTI5 1447 aa26.23■■□□□ 1.79
TRNT1-201ENST00000251607 KIF21AQ7Z4S6 1674 aa26.23■■□□□ 1.79
TRNT1-201ENST00000251607 SYNJ1O43426 1573 aa26.19■■□□□ 1.78
TRNT1-201ENST00000251607 CEP164Q9UPV0 1460 aa26.17■■□□□ 1.78
TRNT1-201ENST00000251607 CUX1P39880 1505 aa26.13■■□□□ 1.77
TRNT1-201ENST00000251607 ERCC6Q03468 1493 aa26.06■■□□□ 1.76
TRNT1-201ENST00000251607 TOP2BQ02880 1626 aa26.05■■□□□ 1.76
TRNT1-201ENST00000251607 URB2Q14146 1524 aaKnown RBP26.02■■□□□ 1.76
TRNT1-201ENST00000251607 BIVM-ERCC5R4GMW8 1640 aa26.02■■□□□ 1.76
TRNT1-201ENST00000251607 TOPBP1Q92547 1522 aa25.97■■□□□ 1.75
TRNT1-201ENST00000251607 DNMBPQ6XZF7 1577 aa25.96■■□□□ 1.75
TRNT1-201ENST00000251607 MRC2Q9UBG0 1479 aa25.93■■□□□ 1.74
TRNT1-201ENST00000251607 FGD5Q6ZNL6 1462 aa25.9■■□□□ 1.74
TRNT1-201ENST00000251607 THOC2Q8NI27 1593 aaKnown RBP25.86■■□□□ 1.73
TRNT1-201ENST00000251607 FAM9AQ8IZU1 332 aaPredicted RBP25.86■■□□□ 1.73
TRNT1-201ENST00000251607 SOGA1O94964 1423 aa25.84■■□□□ 1.73
TRNT1-201ENST00000251607 POLA1P09884 1462 aaPredicted RBP25.84■■□□□ 1.73
TRNT1-201ENST00000251607 WDR62O43379 1518 aa25.82■■□□□ 1.72
TRNT1-201ENST00000251607 RUSC2Q8N2Y8 1516 aa25.79■■□□□ 1.72
TRNT1-201ENST00000251607 RAD54L2Q9Y4B4 1467 aa25.79■■□□□ 1.72
TRNT1-201ENST00000251607 CUX2O14529 1486 aa25.69■■□□□ 1.7
TRNT1-201ENST00000251607 TARBP1Q13395 1621 aaKnown RBP25.63■■□□□ 1.69
TRNT1-201ENST00000251607 ABCA10Q8WWZ4 1543 aa25.61■■□□□ 1.69
TRNT1-201ENST00000251607 EHMT2Q96KQ7 1210 aa25.6■■□□□ 1.69
TRNT1-201ENST00000251607 WDR97A6NE52 1622 aa25.59■■□□□ 1.69
TRNT1-201ENST00000251607 KIF27Q86VH2 1401 aa25.57■■□□□ 1.68
TRNT1-201ENST00000251607 TDRD9Q8NDG6 1382 aaKnown RBP25.57■■□□□ 1.68
TRNT1-201ENST00000251607 LOC105371045A0A1W2PR82 267 aa25.54■■□□□ 1.68
TRNT1-201ENST00000251607 EEA1Q15075 1411 aa25.54■■□□□ 1.68
TRNT1-201ENST00000251607 CSRNP3Q8WYN3 585 aa25.53■■□□□ 1.68
TRNT1-201ENST00000251607 IFT140Q96RY7 1462 aa25.53■■□□□ 1.68
TRNT1-201ENST00000251607 ZNF608Q9ULD9 1512 aaPredicted RBP25.52■■□□□ 1.68
TRNT1-201ENST00000251607 AQRO60306 1485 aaKnown RBP eCLIP25.48■■□□□ 1.673e-9■■■■■ 37.1
TRNT1-201ENST00000251607 ABCA5Q8WWZ7 1642 aa25.46■■□□□ 1.67
TRNT1-201ENST00000251607 GAPVD1Q14C86 1478 aa25.44■■□□□ 1.66
TRNT1-201ENST00000251607 IGF1RP08069 1367 aa25.43■■□□□ 1.66
TRNT1-201ENST00000251607 EIF4G3O43432 1585 aaKnown RBP25.38■■□□□ 1.65
TRNT1-201ENST00000251607 PBRM1Q86U86 1689 aa25.34■■□□□ 1.65
TRNT1-201ENST00000251607 PRXQ9BXM0 1461 aa25.31■■□□□ 1.64
TRNT1-201ENST00000251607 RAPGEF2Q9Y4G8 1499 aa25.31■■□□□ 1.64
TRNT1-201ENST00000251607 KIF21BO75037 1637 aa25.29■■□□□ 1.64
TRNT1-201ENST00000251607 ERICH3Q5RHP9 1530 aa25.29■■□□□ 1.64
TRNT1-201ENST00000251607 CARMIL1Q5VZK9 1371 aa25.29■■□□□ 1.64
TRNT1-201ENST00000251607 GRIN2BQ13224 1484 aa25.27■■□□□ 1.64
TRNT1-201ENST00000251607 GOLGA3Q08378 1498 aa25.24■■□□□ 1.63
TRNT1-201ENST00000251607 UBTFP17480 764 aaKnown RBP25.22■■□□□ 1.63
TRNT1-201ENST00000251607 CUL7Q14999 1698 aa25.22■■□□□ 1.63
TRNT1-201ENST00000251607 SNAPC4Q5SXM2 1469 aa25.21■■□□□ 1.63
TRNT1-201ENST00000251607 ADAMTS12P58397 1594 aa25.16■■□□□ 1.62
TRNT1-201ENST00000251607 FHAD1B1AJZ9 1412 aa25.12■■□□□ 1.61
TRNT1-201ENST00000251607 MAGI1Q96QZ7 1491 aaPredicted RBP25.09■■□□□ 1.61
TRNT1-201ENST00000251607 TNIKQ9UKE5 1360 aa25.07■■□□□ 1.6
TRNT1-201ENST00000251607 FBLN2P98095 1184 aa25.07■■□□□ 1.6
TRNT1-201ENST00000251607 RANGAP1P46060 587 aaPredicted RBP25.05■■□□□ 1.6
TRNT1-201ENST00000251607 CHMP7Q8WUX9 453 aaPredicted RBP25.02■■□□□ 1.6
TRNT1-201ENST00000251607 SYNJ2O15056 1496 aa25.02■■□□□ 1.6
TRNT1-201ENST00000251607 GRIN2AQ12879 1464 aa24.99■■□□□ 1.59
TRNT1-201ENST00000251607 CEP162Q5TB80 1403 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms