RNA–Protein interactions for RNA: ENST00000246657.2

CCR7-201, Transcript of C-C motif chemokine receptor 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR7, Length 2,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-201ENST00000246657 NISCHQ9Y2I1 1504 aa27.47■■□□□ 1.99
CCR7-201ENST00000246657 SLC24A1O60721 1099 aa24.98■■□□□ 1.59
CCR7-201ENST00000246657 CCDC180Q9P1Z9 1646 aa24.66■■□□□ 1.54
CCR7-201ENST00000246657 ABCC9O60706 1549 aa24.42■■□□□ 1.5
CCR7-201ENST00000246657 MYT1Q01538 1121 aa24.15■■□□□ 1.46
CCR7-201ENST00000246657 PELP1Q8IZL8 1130 aaKnown RBP23.95■■□□□ 1.42
CCR7-201ENST00000246657 TTBK1Q5TCY1 1321 aaPredicted RBP23.78■■□□□ 1.4
CCR7-201ENST00000246657 RB1CC1Q8TDY2 1594 aa23.37■■□□□ 1.33
CCR7-201ENST00000246657 PRKCSHP14314 528 aaPredicted RBP23.28■■□□□ 1.32
CCR7-201ENST00000246657 DAXXQ9UER7 740 aaPredicted RBP23.24■■□□□ 1.31
CCR7-201ENST00000246657 NACADO15069 1562 aa23.23■■□□□ 1.31
CCR7-201ENST00000246657 APLP2Q06481 763 aa23.11■■□□□ 1.29
CCR7-201ENST00000246657 DCAF8L2P0C7V8 631 aa23.06■■□□□ 1.28
CCR7-201ENST00000246657 ERICH6Q7L0X2 663 aa23.02■■□□□ 1.28
CCR7-201ENST00000246657 MYO15BQ96JP2 1530 aa22.96■■□□□ 1.27
CCR7-201ENST00000246657 UNC13AQ9UPW8 1703 aa22.86■■□□□ 1.25
CCR7-201ENST00000246657 ZCCHC6Q5VYS8 1495 aaKnown RBP22.82■■□□□ 1.24
CCR7-201ENST00000246657 DCAF1Q9Y4B6 1507 aa22.73■■□□□ 1.23
CCR7-201ENST00000246657 PABPN1Q86U42 306 aaKnown RBP eCLIP22.71■■□□□ 1.23
CCR7-201ENST00000246657 DNAJC5BQ9UF47 199 aa22.68■■□□□ 1.22
CCR7-201ENST00000246657 BICRAQ9NZM4 1560 aa22.64■■□□□ 1.21
CCR7-201ENST00000246657 SCRIBQ14160 1630 aa22.44■■□□□ 1.18
CCR7-201ENST00000246657 SHROOM4Q9ULL8 1493 aa22.41■■□□□ 1.18
CCR7-201ENST00000246657 NCBP3Q53F19 620 aaKnown RBP22.17■■□□□ 1.14
CCR7-201ENST00000246657 CC2D2AQ9P2K1 1620 aa22.1■■□□□ 1.13
CCR7-201ENST00000246657 EIF4G1Q04637 1599 aaKnown RBP22.09■■□□□ 1.13
CCR7-201ENST00000246657 CECR2Q9BXF3 1484 aa21.99■■□□□ 1.11
CCR7-201ENST00000246657 EHMT2Q96KQ7 1210 aa21.93■■□□□ 1.1
CCR7-201ENST00000246657 PLPPR3Q6T4P5 718 aa21.87■■□□□ 1.09
CCR7-201ENST00000246657 RTN4Q9NQC3 1192 aaKnown RBP21.8■■□□□ 1.08
CCR7-201ENST00000246657 EIF5BO60841 1220 aaKnown RBP21.75■■□□□ 1.07
CCR7-201ENST00000246657 ARXQ96QS3 562 aa21.55■■□□□ 1.04
CCR7-201ENST00000246657 BCL11AQ9H165 835 aa21.53■■□□□ 1.04
CCR7-201ENST00000246657 SMARCA4P51532 1647 aa21.43■■□□□ 1.02
CCR7-201ENST00000246657 NCAPD3P42695 1498 aa21.4■■□□□ 1.02
CCR7-201ENST00000246657 ATAD2BQ9ULI0 1458 aa21.37■■□□□ 1.01
CCR7-201ENST00000246657 SMARCA2P51531 1590 aa21.36■■□□□ 1.01
CCR7-201ENST00000246657 BAZ1AQ9NRL2 1556 aaPredicted RBP21.35■■□□□ 1.01
CCR7-201ENST00000246657 HMGXB3Q12766 1538 aa21.31■■□□□ 1
CCR7-201ENST00000246657 RANGAP1P46060 587 aaPredicted RBP21.29■■□□□ 1
CCR7-201ENST00000246657 SUPT5HO00267 1087 aaKnown RBP21.28■■□□□ 1
CCR7-201ENST00000246657 TIMELESSQ9UNS1 1208 aa21.24■□□□□ 0.99
CCR7-201ENST00000246657 PEG3Q9GZU2 1588 aa21.21■□□□□ 0.99
CCR7-201ENST00000246657 BAZ1BQ9UIG0 1483 aaKnown RBP21.2■□□□□ 0.98
CCR7-201ENST00000246657 MROH2BQ7Z745 1585 aa21.16■□□□□ 0.98
CCR7-201ENST00000246657 ERCC6Q03468 1493 aa21.1■□□□□ 0.97
CCR7-201ENST00000246657 AMER1Q5JTC6 1135 aaPredicted RBP21.1■□□□□ 0.97
CCR7-201ENST00000246657 FAM9AQ8IZU1 332 aaPredicted RBP21.1■□□□□ 0.97
CCR7-201ENST00000246657 PLEKHG5O94827 1062 aa21.08■□□□□ 0.97
CCR7-201ENST00000246657 KLHL34Q8N239 644 aa21.04■□□□□ 0.96
CCR7-201ENST00000246657 CUX2O14529 1486 aa21.02■□□□□ 0.96
CCR7-201ENST00000246657 NESP48681 1621 aa21.02■□□□□ 0.95
CCR7-201ENST00000246657 LAMC3Q9Y6N6 1575 aa20.95■□□□□ 0.94
CCR7-201ENST00000246657 WIZO95785 1651 aa20.94■□□□□ 0.94
CCR7-201ENST00000246657 TULP1O00294 542 aaPredicted RBP20.84■□□□□ 0.93
CCR7-201ENST00000246657 THOC2Q8NI27 1593 aaKnown RBP20.83■□□□□ 0.92
CCR7-201ENST00000246657 KIF21AQ7Z4S6 1674 aa20.82■□□□□ 0.92
CCR7-201ENST00000246657 HOMEZQ8IX15 550 aa20.82■□□□□ 0.92
CCR7-201ENST00000246657 PDS5BQ9NTI5 1447 aa20.79■□□□□ 0.92
CCR7-201ENST00000246657 RSF1Q96T23 1441 aaPredicted RBP20.76■□□□□ 0.91
CCR7-201ENST00000246657 CADPSQ9ULU8 1353 aa20.76■□□□□ 0.91
CCR7-201ENST00000246657 DNAJC5Q9H3Z4 198 aa20.74■□□□□ 0.91
CCR7-201ENST00000246657 TOP2AP11388 1531 aaKnown RBP20.7■□□□□ 0.9
CCR7-201ENST00000246657 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
CCR7-201ENST00000246657 PODXL2Q9NZ53 605 aa20.63■□□□□ 0.89
CCR7-201ENST00000246657 HRCP23327 699 aa20.62■□□□□ 0.89
CCR7-201ENST00000246657 MRC2Q9UBG0 1479 aa20.62■□□□□ 0.89
CCR7-201ENST00000246657 CEP164Q9UPV0 1460 aa20.57■□□□□ 0.88
CCR7-201ENST00000246657 WDR62O43379 1518 aa20.57■□□□□ 0.88
CCR7-201ENST00000246657 CFTRP13569 1480 aa20.57■□□□□ 0.88
CCR7-201ENST00000246657 KCNA4P22459 653 aa20.56■□□□□ 0.88
CCR7-201ENST00000246657 FANCD2Q9BXW9 1451 aa20.55■□□□□ 0.88
CCR7-201ENST00000246657 PRDM2Q13029 1718 aa20.49■□□□□ 0.87
CCR7-201ENST00000246657 TAOK2Q9UL54 1235 aa20.49■□□□□ 0.87
CCR7-201ENST00000246657 CCDC88BA6NC98 1476 aa20.42■□□□□ 0.86
CCR7-201ENST00000246657 UBE2Q2Q8WVN8 375 aa20.38■□□□□ 0.85
CCR7-201ENST00000246657 URB2Q14146 1524 aaKnown RBP20.36■□□□□ 0.85
CCR7-201ENST00000246657 NPM2Q86SE8 214 aaKnown RBP20.21■□□□□ 0.83
CCR7-201ENST00000246657 TOPBP1Q92547 1522 aa20.18■□□□□ 0.82
CCR7-201ENST00000246657 PDIA4P13667 645 aaKnown RBP20.17■□□□□ 0.82
CCR7-201ENST00000246657 ABCC8Q09428 1581 aa20.16■□□□□ 0.82
CCR7-201ENST00000246657 TPRNQ4KMQ1 711 aa20.15■□□□□ 0.82
CCR7-201ENST00000246657 IFT140Q96RY7 1462 aa20.15■□□□□ 0.82
CCR7-201ENST00000246657 DNMBPQ6XZF7 1577 aa20.14■□□□□ 0.82
CCR7-201ENST00000246657 SCAF1Q9H7N4 1312 aaKnown RBP20.12■□□□□ 0.81
CCR7-201ENST00000246657 CSRNP3Q8WYN3 585 aa20.11■□□□□ 0.81
CCR7-201ENST00000246657 CENPBP07199 599 aaPredicted RBP20.09■□□□□ 0.81
CCR7-201ENST00000246657 ZNF608Q9ULD9 1512 aaPredicted RBP20.07■□□□□ 0.8
CCR7-201ENST00000246657 BCANQ96GW7 911 aa20.04■□□□□ 0.8
CCR7-201ENST00000246657 EIF4G3O43432 1585 aaKnown RBP20.03■□□□□ 0.8
CCR7-201ENST00000246657 OSCARQ8IYS5 282 aa20.02■□□□□ 0.8
CCR7-201ENST00000246657 GTF3C3Q9Y5Q9 886 aa20.01■□□□□ 0.79
CCR7-201ENST00000246657 TARBP1Q13395 1621 aaKnown RBP20■□□□□ 0.79
CCR7-201ENST00000246657 PPARGC1BQ86YN6 1023 aaKnown RBP19.98■□□□□ 0.79
CCR7-201ENST00000246657 POLA1P09884 1462 aaPredicted RBP19.98■□□□□ 0.79
CCR7-201ENST00000246657 C14orf37Q86TY3 774 aa19.97■□□□□ 0.79
CCR7-201ENST00000246657 PKNOX2Q96KN3 472 aa19.95■□□□□ 0.78
CCR7-201ENST00000246657 PCGF6Q9BYE7 350 aa19.95■□□□□ 0.78
CCR7-201ENST00000246657 LOC105371045A0A1W2PR82 267 aa19.94■□□□□ 0.78
CCR7-201ENST00000246657 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms