RNA–Protein interactions for RNA: ENST00000246554.7

COX6B1-201, Transcript of cytochrome c oxidase subunit 6B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COX6B1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6B1-201ENST00000246554 PCBP1Q15365 356 aaKnown RBP eCLIP13.51□□□□□ -0.258e-26■■■■■ 107.1
COX6B1-201ENST00000246554 RPS3P23396 243 aaKnown RBP eCLIP11.75□□□□□ -0.536e-15■■■■■ 36.4
COX6B1-201ENST00000246554 PTBP1P26599 531 aaKnown RBP eCLIP9.29□□□□□ -0.925e-7■■■■■ 31
COX6B1-201ENST00000246554 LARP4Q71RC2 724 aaKnown RBP eCLIP11.05□□□□□ -0.641e-12■■■■■ 30.6
COX6B1-201ENST00000246554 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.68□□□□□ -0.542e-7■■■■□ 21.8
COX6B1-201ENST00000246554 DDX3XO00571 662 aaKnown RBP eCLIP12.33□□□□□ -0.446e-15■■■□□ 17.9
COX6B1-201ENST00000246554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.53■□□□□ 0.566e-7■■■□□ 17.8
COX6B1-201ENST00000246554 NOLC1Q14978 699 aaKnown RBP eCLIP13.22□□□□□ -0.292e-8■■■□□ 16.8
COX6B1-201ENST00000246554 PABPC4Q13310 644 aaKnown RBP eCLIP14.59□□□□□ -0.071e-17■■■□□ 16.2
COX6B1-201ENST00000246554 EIF3GO75821 320 aaKnown RBP eCLIP8.41□□□□□ -1.067e-7■■■□□ 14.9
COX6B1-201ENST00000246554 AKAP1Q92667 903 aaKnown RBP eCLIP10.63□□□□□ -0.719e-9■■■□□ 14.9
COX6B1-201ENST00000246554 GPKOWQ92917 476 aaPredicted RBP eCLIP13.81□□□□□ -0.22e-6■■■□□ 14.8
COX6B1-201ENST00000246554 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.76□□□□□ -0.055e-8■■□□□ 14.1
COX6B1-201ENST00000246554 SF3B4Q15427 424 aaKnown RBP eCLIP11.13□□□□□ -0.634e-12■■□□□ 13.6
COX6B1-201ENST00000246554 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.3□□□□□ -0.761e-8■■□□□ 13.1
COX6B1-201ENST00000246554 NIPBLQ6KC79 2804 aaeCLIP10.36□□□□□ -0.751e-6■■□□□ 12.8
COX6B1-201ENST00000246554 METAP2P50579 478 aaKnown RBP eCLIP13.88□□□□□ -0.191e-8■■□□□ 12.2
COX6B1-201ENST00000246554 SND1Q7KZF4 910 aaKnown RBP eCLIP12.53□□□□□ -0.45e-30■■□□□ 11.9
COX6B1-201ENST00000246554 YBX3P16989 372 aaKnown RBP eCLIP15.77■□□□□ 0.122e-22■■□□□ 11.8
COX6B1-201ENST00000246554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.41■□□□□ 0.72e-7■□□□□ 10.6
COX6B1-201ENST00000246554 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.26□□□□□ -0.295e-7■□□□□ 10.6
COX6B1-201ENST00000246554 SUB1P53999 127 aaKnown RBP eCLIP9.19□□□□□ -0.948e-21■□□□□ 10.4
COX6B1-201ENST00000246554 DDX6P26196 483 aaKnown RBP eCLIP12.94□□□□□ -0.342e-9■□□□□ 10.2
COX6B1-201ENST00000246554 ZC3H11AO75152 810 aaKnown RBP eCLIP13.31□□□□□ -0.286e-12■□□□□ 10.1
COX6B1-201ENST00000246554 PCBP2Q15366 365 aaKnown RBP eCLIP11.37□□□□□ -0.591e-25■□□□□ 10
COX6B1-201ENST00000246554 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.66□□□□□ -0.062e-8■□□□□ 9.7
COX6B1-201ENST00000246554 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.31□□□□□ -0.61e-6■□□□□ 9.6
COX6B1-201ENST00000246554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.39■□□□□ 0.532e-6■□□□□ 9.3
COX6B1-201ENST00000246554 PUM1Q14671 1186 aaKnown RBP eCLIP12.53□□□□□ -0.42e-6■□□□□ 8.9
COX6B1-201ENST00000246554 TARDBPQ13148 414 aaKnown RBP eCLIP12.04□□□□□ -0.483e-8■□□□□ 8.8
COX6B1-201ENST00000246554 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.6□□□□□ -0.552e-6■□□□□ 8.6
COX6B1-201ENST00000246554 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.06□□□□□ -0.482e-22■□□□□ 8.3
Retrieved 32 of 32 RNA–protein pairs in 6.9 ms