RNA–Protein interactions for RNA: ENST00000242210.11

NT5C3A-201, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 1 (best) BASIC

Gene NT5C3A, Length 1,670 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-201ENST00000242210 AEBP2Q6ZN18 517 aaPredicted RBP24.69■■□□□ 1.54
NT5C3A-201ENST00000242210 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
NT5C3A-201ENST00000242210 SENP3Q9H4L4 574 aaPredicted RBP21.17■□□□□ 0.98
NT5C3A-201ENST00000242210 PHF23Q9BUL5 403 aaPredicted RBP20.76■□□□□ 0.91
NT5C3A-201ENST00000242210 POTEDQ86YR6 584 aa20.03■□□□□ 0.8
NT5C3A-201ENST00000242210 FOXD1Q16676 465 aa19.86■□□□□ 0.77
NT5C3A-201ENST00000242210 MSH5O43196 834 aa18.91■□□□□ 0.62
NT5C3A-201ENST00000242210 PIAS4Q8N2W9 510 aaPredicted RBP18.32■□□□□ 0.52
NT5C3A-201ENST00000242210 PPP6R1Q9UPN7 881 aa17.87■□□□□ 0.45
NT5C3A-201ENST00000242210 ADRA2BP18089 450 aa17.74■□□□□ 0.43
NT5C3A-201ENST00000242210 PLPPR3Q6T4P5 718 aa17.57■□□□□ 0.4
NT5C3A-201ENST00000242210 CACNB1Q02641 598 aaPredicted RBP16.78■□□□□ 0.28
NT5C3A-201ENST00000242210 DMRT2Q9Y5R5 561 aa16.65■□□□□ 0.26
NT5C3A-201ENST00000242210 NISCHQ9Y2I1 1504 aa16.63■□□□□ 0.25
NT5C3A-201ENST00000242210 MAPK8IP2Q13387 824 aaPredicted RBP16.57■□□□□ 0.24
NT5C3A-201ENST00000242210 SCAF1Q9H7N4 1312 aaKnown RBP16.18■□□□□ 0.18
NT5C3A-201ENST00000242210 RNF39Q9H2S5 420 aa16.07■□□□□ 0.16
NT5C3A-201ENST00000242210 DCAF8L1A6NGE4 600 aa15.98■□□□□ 0.15
NT5C3A-201ENST00000242210 C1QBPQ07021 282 aaKnown RBP15.76■□□□□ 0.11
NT5C3A-201ENST00000242210 HOXD11P31277 338 aaPredicted RBP15.68■□□□□ 0.1
NT5C3A-201ENST00000242210 POTEHQ6S545 545 aa15.51■□□□□ 0.07
NT5C3A-201ENST00000242210 PPP4R3CPQ6ZMV5 832 aa15.41■□□□□ 0.06
NT5C3A-201ENST00000242210 RNF216Q9NWF9 866 aaPredicted RBP15.31■□□□□ 0.04
NT5C3A-201ENST00000242210 DNAJC5BQ9UF47 199 aa15.31■□□□□ 0.04
NT5C3A-201ENST00000242210 CNKSR2Q8WXI2 1034 aa15.2■□□□□ 0.02
NT5C3A-201ENST00000242210 CCDC180Q9P1Z9 1646 aa15.02■□□□□ -0
NT5C3A-201ENST00000242210 KCNA4P22459 653 aa15.01□□□□□ -0.01
NT5C3A-201ENST00000242210 ABCC9O60706 1549 aa14.97□□□□□ -0.01
NT5C3A-201ENST00000242210 NCBP3Q53F19 620 aaKnown RBP14.93□□□□□ -0.02
NT5C3A-201ENST00000242210 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.91□□□□□ -0.022e-6■■■□□ 15.2
NT5C3A-201ENST00000242210 NPM3O75607 178 aaKnown RBP14.8□□□□□ -0.04
NT5C3A-201ENST00000242210 DSG3P32926 999 aa14.74□□□□□ -0.05
NT5C3A-201ENST00000242210 SPINK5Q9NQ38 1064 aaPredicted RBP14.59□□□□□ -0.07
NT5C3A-201ENST00000242210 CAPN15O75808 1086 aa14.58□□□□□ -0.07
NT5C3A-201ENST00000242210 U3KPZ7 1027 aaPredicted RBP14.54□□□□□ -0.08
NT5C3A-201ENST00000242210 RB1CC1Q8TDY2 1594 aa14.28□□□□□ -0.12
NT5C3A-201ENST00000242210 SLC4A1APQ9BWU0 796 aaKnown RBP14.23□□□□□ -0.13
NT5C3A-201ENST00000242210 ABCB7O75027 752 aa14.19□□□□□ -0.14
NT5C3A-201ENST00000242210 NACADO15069 1562 aa14.15□□□□□ -0.14
NT5C3A-201ENST00000242210 CHRDL2Q6WN34 429 aa14.14□□□□□ -0.15
NT5C3A-201ENST00000242210 TRHP20396 242 aaPredicted RBP14.13□□□□□ -0.15
NT5C3A-201ENST00000242210 SP7Q8TDD2 431 aaPredicted RBP14.11□□□□□ -0.15
NT5C3A-201ENST00000242210 ZNF219Q9P2Y4 722 aaPredicted RBP14.07□□□□□ -0.16
NT5C3A-201ENST00000242210 RBM42Q9BTD8 480 aaKnown RBP14.06□□□□□ -0.16
NT5C3A-201ENST00000242210 UNC13AQ9UPW8 1703 aa14.05□□□□□ -0.16
NT5C3A-201ENST00000242210 DCAF8L2P0C7V8 631 aa14.03□□□□□ -0.16
NT5C3A-201ENST00000242210 SLC4A2P04920 1241 aa14.02□□□□□ -0.16
NT5C3A-201ENST00000242210 APLP2Q06481 763 aa13.97□□□□□ -0.17
NT5C3A-201ENST00000242210 MYO15BQ96JP2 1530 aa13.91□□□□□ -0.18
NT5C3A-201ENST00000242210 PABPN1Q86U42 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
NT5C3A-201ENST00000242210 ZBTB22O15209 634 aa13.85□□□□□ -0.19
NT5C3A-201ENST00000242210 BICRAQ9NZM4 1560 aa13.84□□□□□ -0.19
NT5C3A-201ENST00000242210 FOXD4L1Q9NU39 408 aa13.79□□□□□ -0.2
NT5C3A-201ENST00000242210 ZCCHC6Q5VYS8 1495 aaKnown RBP13.78□□□□□ -0.2
NT5C3A-201ENST00000242210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.75□□□□□ -0.21
NT5C3A-201ENST00000242210 HNRNPUL2Q1KMD3 747 aaKnown RBP13.75□□□□□ -0.21
NT5C3A-201ENST00000242210 EHMT2Q96KQ7 1210 aa13.75□□□□□ -0.21
NT5C3A-201ENST00000242210 DCAF1Q9Y4B6 1507 aa13.73□□□□□ -0.21
NT5C3A-201ENST00000242210 CSRNP3Q8WYN3 585 aa13.7□□□□□ -0.22
NT5C3A-201ENST00000242210 SCRIBQ14160 1630 aa13.67□□□□□ -0.22
NT5C3A-201ENST00000242210 SAMD1Q6SPF0 538 aaPredicted RBP13.64□□□□□ -0.23
NT5C3A-201ENST00000242210 SHROOM4Q9ULL8 1493 aa13.64□□□□□ -0.23
NT5C3A-201ENST00000242210 MYCNP04198 464 aaPredicted RBP13.62□□□□□ -0.23
NT5C3A-201ENST00000242210 PIP4P2Q8N4L2 257 aa13.62□□□□□ -0.23
NT5C3A-201ENST00000242210 HAX1O00165 279 aa13.58□□□□□ -0.24
NT5C3A-201ENST00000242210 CC2D2AQ9P2K1 1620 aa13.56□□□□□ -0.24
NT5C3A-201ENST00000242210 AKT1S1Q96B36 256 aa13.55□□□□□ -0.24
NT5C3A-201ENST00000242210 POLA2Q14181 598 aa13.53□□□□□ -0.24
NT5C3A-201ENST00000242210 EIF4G1Q04637 1599 aaKnown RBP13.51□□□□□ -0.25
NT5C3A-201ENST00000242210 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
NT5C3A-201ENST00000242210 REM2Q8IYK8 340 aaPredicted RBP13.44□□□□□ -0.26
NT5C3A-201ENST00000242210 FXR2P51116 673 aaKnown RBP eCLIP13.38□□□□□ -0.27
NT5C3A-201ENST00000242210 EVX2Q03828 476 aa13.38□□□□□ -0.27
NT5C3A-201ENST00000242210 ATF5Q9Y2D1 282 aaPredicted RBP13.36□□□□□ -0.27
NT5C3A-201ENST00000242210 PITPNM1O00562 1244 aa13.33□□□□□ -0.28
NT5C3A-201ENST00000242210 ATXN8OSP0DMR3 200 aa13.31□□□□□ -0.28
NT5C3A-201ENST00000242210 LHX8Q68G74 356 aa13.21□□□□□ -0.3
NT5C3A-201ENST00000242210 ZBTB12Q9Y330 459 aaPredicted RBP13.19□□□□□ -0.3
NT5C3A-201ENST00000242210 OSCARQ8IYS5 282 aa13.18□□□□□ -0.3
NT5C3A-201ENST00000242210 PLSCR2Q9NRY7 297 aa13.13□□□□□ -0.31
NT5C3A-201ENST00000242210 SMARCA4P51532 1647 aa13.02□□□□□ -0.33
NT5C3A-201ENST00000242210 GABBR2O75899 941 aa13.01□□□□□ -0.33
NT5C3A-201ENST00000242210 NCAPD3P42695 1498 aa13.01□□□□□ -0.33
NT5C3A-201ENST00000242210 C19orf67A6NJJ6 358 aa12.99□□□□□ -0.33
NT5C3A-201ENST00000242210 SMARCA2P51531 1590 aa12.98□□□□□ -0.33
NT5C3A-201ENST00000242210 ATAD2BQ9ULI0 1458 aa12.98□□□□□ -0.33
NT5C3A-201ENST00000242210 HMGXB3Q12766 1538 aa12.96□□□□□ -0.33
NT5C3A-201ENST00000242210 ERCC6Q03468 1493 aa12.95□□□□□ -0.34
NT5C3A-201ENST00000242210 PRKAR2AP13861 404 aaKnown RBP12.95□□□□□ -0.34
NT5C3A-201ENST00000242210 BAZ1AQ9NRL2 1556 aaPredicted RBP12.93□□□□□ -0.34
NT5C3A-201ENST00000242210 CUX2O14529 1486 aa12.92□□□□□ -0.34
NT5C3A-201ENST00000242210 BAZ1BQ9UIG0 1483 aaKnown RBP12.88□□□□□ -0.35
NT5C3A-201ENST00000242210 DNAJC5Q9H3Z4 198 aa12.88□□□□□ -0.35
NT5C3A-201ENST00000242210 PEG3Q9GZU2 1588 aa12.87□□□□□ -0.35
NT5C3A-201ENST00000242210 NESP48681 1621 aa12.85□□□□□ -0.35
NT5C3A-201ENST00000242210 MROH2BQ7Z745 1585 aa12.81□□□□□ -0.36
NT5C3A-201ENST00000242210 LAMC3Q9Y6N6 1575 aa12.79□□□□□ -0.36
NT5C3A-201ENST00000242210 SUPT5HO00267 1087 aaKnown RBP12.79□□□□□ -0.36
NT5C3A-201ENST00000242210 KIF21AQ7Z4S6 1674 aa12.78□□□□□ -0.36
NT5C3A-201ENST00000242210 THOC2Q8NI27 1593 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms