RNA–Protein interactions for RNA: ENST00000234392.2
Retrieved 9 of 9 RNA–protein pairs in 3 ms
VAX2-201, Transcript of ventral anterior homeobox 2, human
APPRIS P1 TSL 1 (best) BASIC
Gene VAX2, Length 1,147 nt, Biotype protein coding.
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
VAX2-201 | ENST00000234392 | CSTF2 | P33240 | 577 aa | Known RBP eCLIP | 25.8 | ■■□□□ 1.72 | 4e-9 | ■■■■□ 26.2 |
VAX2-201 | ENST00000234392 | PTBP1 | P26599 | 531 aa | Known RBP eCLIP | 20.14 | ■□□□□ 0.81 | 8e-9 | ■■■■■ 32.3 |
VAX2-201 | ENST00000234392 | DDX59 | Q5T1V6 | 619 aa | Known RBP eCLIP | 23.77 | ■■□□□ 1.4 | 3e-7 | ■■□□□ 11.4 |
VAX2-201 | ENST00000234392 | RBFOX2 | O43251 | 390 aa | Known RBP eCLIP | 20.34 | ■□□□□ 0.85 | 8e-7 | ■■□□□ 13.4 |
VAX2-201 | ENST00000234392 | SLTM | Q9NWH9 | 1034 aa | Known RBP eCLIP | 27.35 | ■■□□□ 1.97 | 1e-6 | ■■■■■ 28.6 |
VAX2-201 | ENST00000234392 | QKI | Q96PU8 | 341 aa | Known RBP eCLIP | 26.27 | ■■□□□ 1.8 | 1e-6 | ■■■■■ 33.3 |
VAX2-201 | ENST00000234392 | PCBP2 | Q15366 | 365 aa | Known RBP eCLIP | 24.8 | ■■□□□ 1.56 | 2e-6 | ■■□□□ 14.3 |
VAX2-201 | ENST00000234392 | XPO5 | Q9HAV4 | 1204 aa | Known RBP eCLIP | 31.98 | ■■■□□ 2.71 | 2e-6 | ■■■□□ 18.2 |
VAX2-201 | ENST00000234392 | TROVE2 | P10155 | 538 aa | Known RBP eCLIP | 23.46 | ■■□□□ 1.35 | 8e-6 | ■■■■□ 26.6 |