RNA–Protein interactions for RNA: ENST00000232978.12

NKTR-201, Transcript of natural killer cell triggering receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKTR, Length 7,343 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKTR-201ENST00000232978 SMNDC1O75940 238 aaKnown RBP eCLIP11.74□□□□□ -0.533e-28■■■□□ 18
NKTR-201ENST00000232978 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.59□□□□□ -0.398e-28■■■■■ 42.5
NKTR-201ENST00000232978 SF3A3Q12874 501 aaKnown RBP eCLIP12.62□□□□□ -0.398e-19■■■□□ 16.9
NKTR-201ENST00000232978 DDX6P26196 483 aaKnown RBP eCLIP10.94□□□□□ -0.665e-18■■■■■ 93.3
NKTR-201ENST00000232978 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.8□□□□□ -0.681e-16■■■■□ 25.8
NKTR-201ENST00000232978 CSTF2P33240 577 aaKnown RBP eCLIP11.05□□□□□ -0.645e-16■■■■■ 43.7
NKTR-201ENST00000232978 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.98□□□□□ -0.495e-16■□□□□ 10.8
NKTR-201ENST00000232978 SF3B1O75533 1304 aaKnown RBP eCLIP11.39□□□□□ -0.591e-14■■■■■ 39.4
NKTR-201ENST00000232978 NCBP2P52298 156 aaKnown RBP eCLIP10.91□□□□□ -0.661e-13■■■■■ 26.9
NKTR-201ENST00000232978 CDC40O60508 579 aaKnown RBP eCLIP11.22□□□□□ -0.615e-13■□□□□ 8.6
NKTR-201ENST00000232978 RBFOX2O43251 390 aaKnown RBP eCLIP9.68□□□□□ -0.865e-13■■■■■ 91.3
NKTR-201ENST00000232978 RBM15Q96T37 977 aaKnown RBP eCLIP11.82□□□□□ -0.521e-11■□□□□ 9.9
NKTR-201ENST00000232978 DKC1O60832 514 aaKnown RBP eCLIP12.15□□□□□ -0.464e-11■■■■■ 31.1
NKTR-201ENST00000232978 EIF4G2P78344 907 aaKnown RBP eCLIP14.66□□□□□ -0.062e-10■□□□□ 9.2
NKTR-201ENST00000232978 LSM11P83369 360 aaKnown RBP eCLIP9.94□□□□□ -0.823e-10■■■□□ 15.7
NKTR-201ENST00000232978 EFTUD2Q15029 972 aaKnown RBP eCLIP11.96□□□□□ -0.496e-10■■■□□ 17.6
NKTR-201ENST00000232978 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.61□□□□□ -0.551e-9■■■□□ 17.3
NKTR-201ENST00000232978 ZNF622Q969S3 477 aaKnown RBP eCLIP12.37□□□□□ -0.431e-9■■□□□ 11.4
NKTR-201ENST00000232978 KHSRPQ92945 711 aaKnown RBP eCLIP10.45□□□□□ -0.741e-9■■■□□ 17.1
NKTR-201ENST00000232978 ZC3H11AO75152 810 aaKnown RBP eCLIP11.41□□□□□ -0.583e-9■■■■■ 40.4
NKTR-201ENST00000232978 SAFB2Q14151 953 aaKnown RBP eCLIP13.86□□□□□ -0.196e-9■□□□□ 8
NKTR-201ENST00000232978 U2AF1Q01081 240 aaKnown RBP eCLIP13.91□□□□□ -0.188e-9■■■□□ 15.2
NKTR-201ENST00000232978 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.84□□□□□ -0.358e-9■■■□□ 15.8
NKTR-201ENST00000232978 ILF3Q12906 894 aaKnown RBP eCLIP10.83□□□□□ -0.689e-9■■□□□ 11.5
NKTR-201ENST00000232978 PPIGQ13427 754 aaKnown RBP eCLIP10.77□□□□□ -0.689e-9■■□□□ 12.2
NKTR-201ENST00000232978 WDR43Q15061 677 aaKnown RBP eCLIP14.84□□□□□ -0.031e-8■■■□□ 18.1
NKTR-201ENST00000232978 U2AF2P26368 475 aaKnown RBP eCLIP12.86□□□□□ -0.351e-8■■■■■ 30.4
NKTR-201ENST00000232978 AARSP49588 968 aaKnown RBP eCLIP11.94□□□□□ -0.51e-8■■□□□ 14.2
NKTR-201ENST00000232978 TARDBPQ13148 414 aaKnown RBP eCLIP11.04□□□□□ -0.642e-8■■■■□ 22.3
NKTR-201ENST00000232978 HNRNPCP07910 306 aaKnown RBP eCLIP12.14□□□□□ -0.473e-8■■□□□ 12.8
NKTR-201ENST00000232978 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.56□□□□□ -0.083e-8■■□□□ 11.8
NKTR-201ENST00000232978 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.67□□□□□ -0.74e-8■■■□□ 14.6
NKTR-201ENST00000232978 SF3B4Q15427 424 aaKnown RBP eCLIP10.66□□□□□ -0.75e-8■■■■■ 28.9
NKTR-201ENST00000232978 ZRANB2O95218 330 aaKnown RBP eCLIP11.92□□□□□ -0.55e-8■■□□□ 11.4
NKTR-201ENST00000232978 HNRNPLP14866 589 aaKnown RBP eCLIP11.29□□□□□ -0.65e-8■□□□□ 8.9
NKTR-201ENST00000232978 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.23□□□□□ -0.615e-8■■□□□ 12.5
NKTR-201ENST00000232978 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.29□□□□□ -0.767e-8■□□□□ 10.4
NKTR-201ENST00000232978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.61□□□□□ -0.557e-8■■■□□ 15.9
NKTR-201ENST00000232978 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.48□□□□□ -0.579e-8■■■■□ 19.7
NKTR-201ENST00000232978 LARP4Q71RC2 724 aaKnown RBP eCLIP10.57□□□□□ -0.729e-8■■■■□ 22.2
NKTR-201ENST00000232978 NOLC1Q14978 699 aaKnown RBP eCLIP13.05□□□□□ -0.321e-7■■■■□ 24.2
NKTR-201ENST00000232978 HLTFQ14527 1009 aaKnown RBP eCLIP13□□□□□ -0.332e-7■■■□□ 14.8
NKTR-201ENST00000232978 TRA2AQ13595 282 aaKnown RBP eCLIP9.61□□□□□ -0.872e-7■■□□□ 12.4
NKTR-201ENST00000232978 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.06□□□□□ -0.323e-7■■□□□ 11.9
NKTR-201ENST00000232978 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.28□□□□□ -0.283e-7■■■■■ 63.4
NKTR-201ENST00000232978 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8□□□□□ -1.133e-7■■■■■ 32.6
NKTR-201ENST00000232978 PUS1Q9Y606 427 aaKnown RBP eCLIP10.59□□□□□ -0.713e-7■■■■□ 24.9
NKTR-201ENST00000232978 TIA1P31483 386 aaKnown RBP eCLIP10.68□□□□□ -0.73e-7■■■■■ 30.3
NKTR-201ENST00000232978 EIF3HO15372 352 aaKnown RBP eCLIP12.01□□□□□ -0.494e-7■■■■□ 22.4
NKTR-201ENST00000232978 GPKOWQ92917 476 aaPredicted RBP eCLIP12.15□□□□□ -0.464e-7■■■□□ 14.7
NKTR-201ENST00000232978 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.69□□□□□ -0.75e-7■■□□□ 14.4
NKTR-201ENST00000232978 AQRO60306 1485 aaKnown RBP eCLIP12.52□□□□□ -0.415e-7■■■■□ 21
NKTR-201ENST00000232978 MATR3P43243 847 aaKnown RBP eCLIP12.97□□□□□ -0.337e-7■■■□□ 16.2
NKTR-201ENST00000232978 RBM22Q9NW64 420 aaKnown RBP eCLIP11.35□□□□□ -0.598e-7■■■■□ 21.8
NKTR-201ENST00000232978 PTBP1P26599 531 aaKnown RBP eCLIP10.42□□□□□ -0.749e-7■■■■■ 27.6
NKTR-201ENST00000232978 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.2□□□□□ -0.789e-7■■■■■ 27.2
NKTR-201ENST00000232978 SRSF1Q07955 248 aaKnown RBP eCLIP9.4□□□□□ -0.91e-6■□□□□ 10.4
NKTR-201ENST00000232978 NIPBLQ6KC79 2804 aaeCLIP5.49□□□□□ -1.531e-6■■□□□ 13.4
NKTR-201ENST00000232978 SAFBQ15424 915 aaKnown RBP eCLIP13.41□□□□□ -0.261e-6■□□□□ 11.3
NKTR-201ENST00000232978 QKIQ96PU8 341 aaKnown RBP eCLIP11.5□□□□□ -0.571e-6■■■□□ 14.8
NKTR-201ENST00000232978 TIAL1Q01085 375 aaKnown RBP eCLIP10.12□□□□□ -0.791e-6■■□□□ 12.4
NKTR-201ENST00000232978 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.46□□□□□ -0.582e-6■■■■■ 47.5
NKTR-201ENST00000232978 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.062e-6■□□□□ 9.6
NKTR-201ENST00000232978 TAF15Q92804 592 aaKnown RBP eCLIP9.74□□□□□ -0.853e-6■■■□□ 15.8
NKTR-201ENST00000232978 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.86□□□□□ -0.514e-6■■■■□ 24.2
NKTR-201ENST00000232978 CPSF6Q16630 551 aaKnown RBP eCLIP11.17□□□□□ -0.625e-6■■■■□ 22.5
NKTR-201ENST00000232978 FUBP3Q96I24 572 aaKnown RBP eCLIP10.66□□□□□ -0.78e-6■■□□□ 13.5
Retrieved 67 of 67 RNA–protein pairs in 133.6 ms