RNA–Protein interactions for RNA: ENST00000222396.9

AC008013.1-204, humanhuman

TSL 4 BASIC

Gene AC008013.1, Length 623 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008013.1-204ENST00000222396 NISCHQ9Y2I1 1504 aa25.32■■□□□ 1.64
AC008013.1-204ENST00000222396 CCDC180Q9P1Z9 1646 aa22.5■■□□□ 1.19
AC008013.1-204ENST00000222396 ABCC9O60706 1549 aa22■■□□□ 1.11
AC008013.1-204ENST00000222396 RB1CC1Q8TDY2 1594 aa21.13■□□□□ 0.97
AC008013.1-204ENST00000222396 ZCCHC6Q5VYS8 1495 aaKnown RBP21.11■□□□□ 0.97
AC008013.1-204ENST00000222396 NACADO15069 1562 aa21.1■□□□□ 0.97
AC008013.1-204ENST00000222396 DCAF8L2P0C7V8 631 aa21.07■□□□□ 0.96
AC008013.1-204ENST00000222396 MYO15BQ96JP2 1530 aa20.97■□□□□ 0.95
AC008013.1-204ENST00000222396 DCAF1Q9Y4B6 1507 aa20.91■□□□□ 0.94
AC008013.1-204ENST00000222396 UNC13AQ9UPW8 1703 aa20.78■□□□□ 0.92
AC008013.1-204ENST00000222396 BICRAQ9NZM4 1560 aa20.58■□□□□ 0.88
AC008013.1-204ENST00000222396 SCRIBQ14160 1630 aa20.57■□□□□ 0.88
AC008013.1-204ENST00000222396 PABPN1Q86U42 306 aaKnown RBP eCLIP20.55■□□□□ 0.88
AC008013.1-204ENST00000222396 SHROOM4Q9ULL8 1493 aa20.23■□□□□ 0.83
AC008013.1-204ENST00000222396 DNAJC5BQ9UF47 199 aa20.19■□□□□ 0.82
AC008013.1-204ENST00000222396 EIF4G1Q04637 1599 aaKnown RBP19.99■□□□□ 0.79
AC008013.1-204ENST00000222396 CC2D2AQ9P2K1 1620 aa19.91■□□□□ 0.78
AC008013.1-204ENST00000222396 CECR2Q9BXF3 1484 aa19.77■□□□□ 0.76
AC008013.1-204ENST00000222396 SMARCA4P51532 1647 aa19.66■□□□□ 0.74
AC008013.1-204ENST00000222396 BAZ1AQ9NRL2 1556 aaPredicted RBP19.59■□□□□ 0.73
AC008013.1-204ENST00000222396 MROH2BQ7Z745 1585 aa19.55■□□□□ 0.72
AC008013.1-204ENST00000222396 ATAD2BQ9ULI0 1458 aa19.52■□□□□ 0.72
AC008013.1-204ENST00000222396 NCAPD3P42695 1498 aa19.48■□□□□ 0.71
AC008013.1-204ENST00000222396 SMARCA2P51531 1590 aa19.46■□□□□ 0.71
AC008013.1-204ENST00000222396 PEG3Q9GZU2 1588 aa19.44■□□□□ 0.7
AC008013.1-204ENST00000222396 HMGXB3Q12766 1538 aa19.4■□□□□ 0.7
AC008013.1-204ENST00000222396 WIZO95785 1651 aa19.36■□□□□ 0.69
AC008013.1-204ENST00000222396 BAZ1BQ9UIG0 1483 aaKnown RBP19.34■□□□□ 0.69
AC008013.1-204ENST00000222396 RSF1Q96T23 1441 aaPredicted RBP19.3■□□□□ 0.68
AC008013.1-204ENST00000222396 TOP2AP11388 1531 aaKnown RBP19.1■□□□□ 0.65
AC008013.1-204ENST00000222396 NESP48681 1621 aa19.08■□□□□ 0.65
AC008013.1-204ENST00000222396 LAMC3Q9Y6N6 1575 aa18.96■□□□□ 0.63
AC008013.1-204ENST00000222396 CADPSQ9ULU8 1353 aa18.9■□□□□ 0.62
AC008013.1-204ENST00000222396 ERCC6Q03468 1493 aa18.9■□□□□ 0.62
AC008013.1-204ENST00000222396 CCDC88BA6NC98 1476 aa18.89■□□□□ 0.61
AC008013.1-204ENST00000222396 KIF21AQ7Z4S6 1674 aa18.87■□□□□ 0.61
AC008013.1-204ENST00000222396 CFTRP13569 1480 aa18.82■□□□□ 0.6
AC008013.1-204ENST00000222396 SUPT5HO00267 1087 aaKnown RBP18.8■□□□□ 0.6
AC008013.1-204ENST00000222396 PDS5BQ9NTI5 1447 aa18.79■□□□□ 0.6
AC008013.1-204ENST00000222396 THOC2Q8NI27 1593 aaKnown RBP18.79■□□□□ 0.6
AC008013.1-204ENST00000222396 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
AC008013.1-204ENST00000222396 FANCD2Q9BXW9 1451 aa18.71■□□□□ 0.59
AC008013.1-204ENST00000222396 CUX2O14529 1486 aa18.68■□□□□ 0.58
AC008013.1-204ENST00000222396 CEP164Q9UPV0 1460 aa18.67■□□□□ 0.58
AC008013.1-204ENST00000222396 MRC2Q9UBG0 1479 aa18.65■□□□□ 0.58
AC008013.1-204ENST00000222396 WDR62O43379 1518 aa18.61■□□□□ 0.57
AC008013.1-204ENST00000222396 URB2Q14146 1524 aaKnown RBP18.56■□□□□ 0.56
AC008013.1-204ENST00000222396 TOPBP1Q92547 1522 aa18.44■□□□□ 0.54
AC008013.1-204ENST00000222396 DNMBPQ6XZF7 1577 aa18.41■□□□□ 0.54
AC008013.1-204ENST00000222396 ABCC8Q09428 1581 aa18.34■□□□□ 0.53
AC008013.1-204ENST00000222396 CUX1P39880 1505 aa18.33■□□□□ 0.53
AC008013.1-204ENST00000222396 POLA1P09884 1462 aaPredicted RBP18.28■□□□□ 0.52
AC008013.1-204ENST00000222396 IFT140Q96RY7 1462 aa18.26■□□□□ 0.51
AC008013.1-204ENST00000222396 ZNF608Q9ULD9 1512 aaPredicted RBP18.26■□□□□ 0.51
AC008013.1-204ENST00000222396 TARBP1Q13395 1621 aaKnown RBP18.26■□□□□ 0.51
AC008013.1-204ENST00000222396 FGD5Q6ZNL6 1462 aa18.25■□□□□ 0.51
AC008013.1-204ENST00000222396 RAD54L2Q9Y4B4 1467 aa18.22■□□□□ 0.51
AC008013.1-204ENST00000222396 SYNJ1O43426 1573 aa18.21■□□□□ 0.51
AC008013.1-204ENST00000222396 EIF4G3O43432 1585 aaKnown RBP18.19■□□□□ 0.5
AC008013.1-204ENST00000222396 BIVM-ERCC5R4GMW8 1640 aa18.18■□□□□ 0.5
AC008013.1-204ENST00000222396 TOP2BQ02880 1626 aa18.16■□□□□ 0.5
AC008013.1-204ENST00000222396 SOGA1O94964 1423 aa18.16■□□□□ 0.5
AC008013.1-204ENST00000222396 WRNQ14191 1432 aaPredicted RBP eCLIP18.16■□□□□ 0.5
AC008013.1-204ENST00000222396 WDR97A6NE52 1622 aa18.15■□□□□ 0.5
AC008013.1-204ENST00000222396 AQRO60306 1485 aaKnown RBP eCLIP18.13■□□□□ 0.49
AC008013.1-204ENST00000222396 TDRD9Q8NDG6 1382 aaKnown RBP18.08■□□□□ 0.49
AC008013.1-204ENST00000222396 DNAJC5Q9H3Z4 198 aa18.07■□□□□ 0.48
AC008013.1-204ENST00000222396 ABCA10Q8WWZ4 1543 aa18.04■□□□□ 0.48
AC008013.1-204ENST00000222396 ABCA5Q8WWZ7 1642 aa18.02■□□□□ 0.48
AC008013.1-204ENST00000222396 PBRM1Q86U86 1689 aa18■□□□□ 0.47
AC008013.1-204ENST00000222396 CHD1O14646 1710 aa17.98■□□□□ 0.47
AC008013.1-204ENST00000222396 GAPVD1Q14C86 1478 aa17.96■□□□□ 0.47
AC008013.1-204ENST00000222396 SNAPC4Q5SXM2 1469 aa17.96■□□□□ 0.47
AC008013.1-204ENST00000222396 GRIN2BQ13224 1484 aa17.95■□□□□ 0.46
AC008013.1-204ENST00000222396 MAGI1Q96QZ7 1491 aaPredicted RBP17.89■□□□□ 0.45
AC008013.1-204ENST00000222396 OSCARQ8IYS5 282 aa17.87■□□□□ 0.45
AC008013.1-204ENST00000222396 ADAMTS12P58397 1594 aa17.84■□□□□ 0.45
AC008013.1-204ENST00000222396 FBLN2P98095 1184 aa17.84■□□□□ 0.45
AC008013.1-204ENST00000222396 SYNJ2O15056 1496 aa17.83■□□□□ 0.45
AC008013.1-204ENST00000222396 ERICH3Q5RHP9 1530 aa17.82■□□□□ 0.44
AC008013.1-204ENST00000222396 CHMP7Q8WUX9 453 aaPredicted RBP17.77■□□□□ 0.44
AC008013.1-204ENST00000222396 KIF27Q86VH2 1401 aa17.76■□□□□ 0.43
AC008013.1-204ENST00000222396 CLASP1Q7Z460 1538 aa17.75■□□□□ 0.43
AC008013.1-204ENST00000222396 GRIN2AQ12879 1464 aa17.75■□□□□ 0.43
AC008013.1-204ENST00000222396 FHAD1B1AJZ9 1412 aa17.74■□□□□ 0.43
AC008013.1-204ENST00000222396 RUSC2Q8N2Y8 1516 aa17.72■□□□□ 0.43
AC008013.1-204ENST00000222396 TRIM41Q8WV44 630 aa17.72■□□□□ 0.43
AC008013.1-204ENST00000222396 IGF1RP08069 1367 aa17.71■□□□□ 0.43
AC008013.1-204ENST00000222396 CEP170Q5SW79 1584 aa17.7■□□□□ 0.42
AC008013.1-204ENST00000222396 RIMBP3CA6NJZ7 1639 aa17.7■□□□□ 0.42
AC008013.1-204ENST00000222396 RIMBP3BA6NNM3 1639 aa17.7■□□□□ 0.42
AC008013.1-204ENST00000222396 RIMBP3Q9UFD9 1639 aa17.7■□□□□ 0.42
AC008013.1-204ENST00000222396 CUL7Q14999 1698 aa17.68■□□□□ 0.42
AC008013.1-204ENST00000222396 ARHGEF11O15085 1522 aa17.67■□□□□ 0.42
AC008013.1-204ENST00000222396 NUP160Q12769 1436 aa17.66■□□□□ 0.42
AC008013.1-204ENST00000222396 CARMIL1Q5VZK9 1371 aa17.59■□□□□ 0.41
AC008013.1-204ENST00000222396 CHIC1Q5VXU3 224 aa17.57■□□□□ 0.4
AC008013.1-204ENST00000222396 SHROOM2Q13796 1616 aa17.56■□□□□ 0.4
AC008013.1-204ENST00000222396 ERCC6L2Q5T890 1561 aa17.56■□□□□ 0.4
AC008013.1-204ENST00000222396 ARAP1Q96P48 1450 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms