RNA–Protein interactions for RNA: ENST00000222266.2

PSENEN-201, Transcript of presenilin enhancer, gamma-secretase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSENEN, Length 603 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSENEN-201ENST00000222266 NISCHQ9Y2I1 1504 aa23.97■■□□□ 1.43
PSENEN-201ENST00000222266 CCDC180Q9P1Z9 1646 aa21.21■□□□□ 0.99
PSENEN-201ENST00000222266 ABCC9O60706 1549 aa20.58■□□□□ 0.89
PSENEN-201ENST00000222266 DCAF8L2P0C7V8 631 aa20.15■□□□□ 0.82
PSENEN-201ENST00000222266 ZCCHC6Q5VYS8 1495 aaKnown RBP19.98■□□□□ 0.79
PSENEN-201ENST00000222266 NACADO15069 1562 aa19.97■□□□□ 0.79
PSENEN-201ENST00000222266 RB1CC1Q8TDY2 1594 aa19.95■□□□□ 0.78
PSENEN-201ENST00000222266 MYO15BQ96JP2 1530 aa19.92■□□□□ 0.78
PSENEN-201ENST00000222266 DCAF1Q9Y4B6 1507 aa19.88■□□□□ 0.77
PSENEN-201ENST00000222266 SCRIBQ14160 1630 aa19.34■□□□□ 0.69
PSENEN-201ENST00000222266 PABPN1Q86U42 306 aaKnown RBP eCLIP19.31■□□□□ 0.68
PSENEN-201ENST00000222266 UNC13AQ9UPW8 1703 aa19.24■□□□□ 0.67
PSENEN-201ENST00000222266 SHROOM4Q9ULL8 1493 aa19.21■□□□□ 0.67
PSENEN-201ENST00000222266 BICRAQ9NZM4 1560 aa19.15■□□□□ 0.66
PSENEN-201ENST00000222266 EIF4G1Q04637 1599 aaKnown RBP18.73■□□□□ 0.59
PSENEN-201ENST00000222266 BAZ1AQ9NRL2 1556 aaPredicted RBP18.63■□□□□ 0.57
PSENEN-201ENST00000222266 DNAJC5BQ9UF47 199 aa18.62■□□□□ 0.57
PSENEN-201ENST00000222266 CC2D2AQ9P2K1 1620 aa18.59■□□□□ 0.57
PSENEN-201ENST00000222266 CECR2Q9BXF3 1484 aa18.58■□□□□ 0.56
PSENEN-201ENST00000222266 SMARCA4P51532 1647 aa18.52■□□□□ 0.56
PSENEN-201ENST00000222266 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
PSENEN-201ENST00000222266 MROH2BQ7Z745 1585 aa18.42■□□□□ 0.54
PSENEN-201ENST00000222266 NCAPD3P42695 1498 aa18.41■□□□□ 0.54
PSENEN-201ENST00000222266 ATAD2BQ9ULI0 1458 aa18.41■□□□□ 0.54
PSENEN-201ENST00000222266 PEG3Q9GZU2 1588 aa18.34■□□□□ 0.53
PSENEN-201ENST00000222266 BAZ1BQ9UIG0 1483 aaKnown RBP18.34■□□□□ 0.53
PSENEN-201ENST00000222266 RSF1Q96T23 1441 aaPredicted RBP18.33■□□□□ 0.53
PSENEN-201ENST00000222266 HMGXB3Q12766 1538 aa18.32■□□□□ 0.52
PSENEN-201ENST00000222266 WIZO95785 1651 aa18.2■□□□□ 0.5
PSENEN-201ENST00000222266 SUPT5HO00267 1087 aaKnown RBP18.15■□□□□ 0.5
PSENEN-201ENST00000222266 TOP2AP11388 1531 aaKnown RBP18.11■□□□□ 0.49
PSENEN-201ENST00000222266 CADPSQ9ULU8 1353 aa17.92■□□□□ 0.46
PSENEN-201ENST00000222266 LAMC3Q9Y6N6 1575 aa17.9■□□□□ 0.46
PSENEN-201ENST00000222266 CCDC88BA6NC98 1476 aa17.89■□□□□ 0.45
PSENEN-201ENST00000222266 PDS5BQ9NTI5 1447 aa17.88■□□□□ 0.45
PSENEN-201ENST00000222266 ERCC6Q03468 1493 aa17.86■□□□□ 0.45
PSENEN-201ENST00000222266 CFTRP13569 1480 aa17.81■□□□□ 0.44
PSENEN-201ENST00000222266 NESP48681 1621 aa17.8■□□□□ 0.44
PSENEN-201ENST00000222266 FANCD2Q9BXW9 1451 aa17.69■□□□□ 0.42
PSENEN-201ENST00000222266 CEP164Q9UPV0 1460 aa17.68■□□□□ 0.42
PSENEN-201ENST00000222266 MRC2Q9UBG0 1479 aa17.58■□□□□ 0.41
PSENEN-201ENST00000222266 PRDM2Q13029 1718 aa17.58■□□□□ 0.4
PSENEN-201ENST00000222266 CUX2O14529 1486 aa17.56■□□□□ 0.4
PSENEN-201ENST00000222266 KIF21AQ7Z4S6 1674 aa17.55■□□□□ 0.4
PSENEN-201ENST00000222266 ABCC8Q09428 1581 aa17.55■□□□□ 0.4
PSENEN-201ENST00000222266 THOC2Q8NI27 1593 aaKnown RBP17.46■□□□□ 0.39
PSENEN-201ENST00000222266 WDR62O43379 1518 aa17.46■□□□□ 0.39
PSENEN-201ENST00000222266 URB2Q14146 1524 aaKnown RBP17.41■□□□□ 0.38
PSENEN-201ENST00000222266 DNMBPQ6XZF7 1577 aa17.4■□□□□ 0.38
PSENEN-201ENST00000222266 TOPBP1Q92547 1522 aa17.38■□□□□ 0.37
PSENEN-201ENST00000222266 WRNQ14191 1432 aaPredicted RBP eCLIP17.36■□□□□ 0.37
PSENEN-201ENST00000222266 IFT140Q96RY7 1462 aa17.31■□□□□ 0.36
PSENEN-201ENST00000222266 SOGA1O94964 1423 aa17.28■□□□□ 0.36
PSENEN-201ENST00000222266 CUX1P39880 1505 aa17.27■□□□□ 0.36
PSENEN-201ENST00000222266 POLA1P09884 1462 aaPredicted RBP17.24■□□□□ 0.35
PSENEN-201ENST00000222266 FGD5Q6ZNL6 1462 aa17.24■□□□□ 0.35
PSENEN-201ENST00000222266 TOP2BQ02880 1626 aa17.22■□□□□ 0.35
PSENEN-201ENST00000222266 TRIM41Q8WV44 630 aa17.2■□□□□ 0.34
PSENEN-201ENST00000222266 BIVM-ERCC5R4GMW8 1640 aa17.18■□□□□ 0.34
PSENEN-201ENST00000222266 SYNJ1O43426 1573 aa17.15■□□□□ 0.34
PSENEN-201ENST00000222266 RAD54L2Q9Y4B4 1467 aa17.14■□□□□ 0.33
PSENEN-201ENST00000222266 WDR97A6NE52 1622 aa17.13■□□□□ 0.33
PSENEN-201ENST00000222266 TARBP1Q13395 1621 aaKnown RBP17.11■□□□□ 0.33
PSENEN-201ENST00000222266 TDRD9Q8NDG6 1382 aaKnown RBP17.11■□□□□ 0.33
PSENEN-201ENST00000222266 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
PSENEN-201ENST00000222266 ZNF608Q9ULD9 1512 aaPredicted RBP17.08■□□□□ 0.32
PSENEN-201ENST00000222266 AQRO60306 1485 aaKnown RBP eCLIP17.07■□□□□ 0.32
PSENEN-201ENST00000222266 GAPVD1Q14C86 1478 aa17.05■□□□□ 0.32
PSENEN-201ENST00000222266 GRIN2BQ13224 1484 aa17.05■□□□□ 0.32
PSENEN-201ENST00000222266 KIF27Q86VH2 1401 aa17.04■□□□□ 0.32
PSENEN-201ENST00000222266 EIF4G3O43432 1585 aaKnown RBP17.02■□□□□ 0.32
PSENEN-201ENST00000222266 FBLN2P98095 1184 aa17■□□□□ 0.31
PSENEN-201ENST00000222266 CHMP7Q8WUX9 453 aaPredicted RBP17■□□□□ 0.31
PSENEN-201ENST00000222266 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
PSENEN-201ENST00000222266 MAGI1Q96QZ7 1491 aaPredicted RBP16.98■□□□□ 0.31
PSENEN-201ENST00000222266 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
PSENEN-201ENST00000222266 ABCA5Q8WWZ7 1642 aa16.94■□□□□ 0.3
PSENEN-201ENST00000222266 ERICH3Q5RHP9 1530 aa16.93■□□□□ 0.3
PSENEN-201ENST00000222266 SNAPC4Q5SXM2 1469 aa16.93■□□□□ 0.3
PSENEN-201ENST00000222266 FHAD1B1AJZ9 1412 aa16.89■□□□□ 0.29
PSENEN-201ENST00000222266 SYNJ2O15056 1496 aa16.89■□□□□ 0.29
PSENEN-201ENST00000222266 EEA1Q15075 1411 aa16.88■□□□□ 0.29
PSENEN-201ENST00000222266 PBRM1Q86U86 1689 aa16.87■□□□□ 0.29
PSENEN-201ENST00000222266 IGF1RP08069 1367 aa16.86■□□□□ 0.29
PSENEN-201ENST00000222266 CARMIL1Q5VZK9 1371 aa16.82■□□□□ 0.28
PSENEN-201ENST00000222266 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
PSENEN-201ENST00000222266 CUL7Q14999 1698 aa16.8■□□□□ 0.28
PSENEN-201ENST00000222266 DNAJC5Q9H3Z4 198 aa16.79■□□□□ 0.28
PSENEN-201ENST00000222266 ADAMTS12P58397 1594 aa16.78■□□□□ 0.28
PSENEN-201ENST00000222266 GRIN2AQ12879 1464 aa16.77■□□□□ 0.28
PSENEN-201ENST00000222266 FAM9AQ8IZU1 332 aaPredicted RBP16.75■□□□□ 0.27
PSENEN-201ENST00000222266 RAPGEF2Q9Y4G8 1499 aa16.73■□□□□ 0.27
PSENEN-201ENST00000222266 CHD1O14646 1710 aa16.73■□□□□ 0.27
PSENEN-201ENST00000222266 RUSC2Q8N2Y8 1516 aa16.72■□□□□ 0.27
PSENEN-201ENST00000222266 NUP160Q12769 1436 aa16.67■□□□□ 0.26
PSENEN-201ENST00000222266 PRXQ9BXM0 1461 aa16.64■□□□□ 0.25
PSENEN-201ENST00000222266 KIAA0586Q9BVV6 1533 aa16.63■□□□□ 0.25
PSENEN-201ENST00000222266 JPH4Q96JJ6 628 aa16.62■□□□□ 0.25
PSENEN-201ENST00000222266 UBTFP17480 764 aaKnown RBP16.59■□□□□ 0.25
PSENEN-201ENST00000222266 CLASP1Q7Z460 1538 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms