RNA–Protein interactions for RNA: ENST00000052569.10

GOPC-201, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GOPC, Length 4,590 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-201ENST00000052569 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.88■□□□□ 0.297e-8■■■■■ 186.3
GOPC-201ENST00000052569 SF3B1O75533 1304 aaKnown RBP eCLIP14.61□□□□□ -0.078e-6■■■■■ 107
GOPC-201ENST00000052569 FUBP3Q96I24 572 aaKnown RBP eCLIP14.35□□□□□ -0.111e-23■■■■■ 55.1
GOPC-201ENST00000052569 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.61□□□□□ -0.394e-7■■■■■ 54.4
GOPC-201ENST00000052569 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.76□□□□□ -0.051e-11■■■■■ 38.7
GOPC-201ENST00000052569 KHSRPQ92945 711 aaKnown RBP eCLIP13.86□□□□□ -0.196e-9■■■■□ 25.4
GOPC-201ENST00000052569 EIF4G2P78344 907 aaKnown RBP eCLIP19.62■□□□□ 0.736e-6■■■■□ 25.1
GOPC-201ENST00000052569 U2AF1Q01081 240 aaKnown RBP eCLIP18.65■□□□□ 0.587e-7■■■■□ 25
GOPC-201ENST00000052569 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.94□□□□□ -0.182e-6■■■■□ 24.9
GOPC-201ENST00000052569 CSTF2P33240 577 aaKnown RBP eCLIP14.2□□□□□ -0.149e-8■■■■□ 22
GOPC-201ENST00000052569 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.75■□□□□ 0.754e-8■■■■□ 21.9
GOPC-201ENST00000052569 PTBP1P26599 531 aaKnown RBP eCLIP13.3□□□□□ -0.283e-7■■■■□ 20.2
GOPC-201ENST00000052569 HLTFQ14527 1009 aaKnown RBP eCLIP16.72■□□□□ 0.271e-6■■■■□ 20
GOPC-201ENST00000052569 AQRO60306 1485 aaKnown RBP eCLIP17.95■□□□□ 0.462e-7■■■■□ 20
GOPC-201ENST00000052569 DDX3XO00571 662 aaKnown RBP eCLIP15.19■□□□□ 0.027e-11■■■□□ 18.9
GOPC-201ENST00000052569 U2AF2P26368 475 aaKnown RBP eCLIP16.53■□□□□ 0.249e-7■■■□□ 18.6
GOPC-201ENST00000052569 TIA1P31483 386 aaKnown RBP eCLIP14.03□□□□□ -0.167e-6■■■□□ 17.1
GOPC-201ENST00000052569 ZNF622Q969S3 477 aaKnown RBP eCLIP16.56■□□□□ 0.244e-6■■■□□ 17
GOPC-201ENST00000052569 RPS3P23396 243 aaKnown RBP eCLIP13.95□□□□□ -0.184e-8■■■□□ 16.5
GOPC-201ENST00000052569 NCBP2P52298 156 aaKnown RBP eCLIP14.2□□□□□ -0.144e-8■■■□□ 16.4
GOPC-201ENST00000052569 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.18■□□□□ 0.181e-9■■■□□ 16.2
GOPC-201ENST00000052569 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.09■□□□□ 0.176e-8■■■□□ 16
GOPC-201ENST00000052569 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.61■□□□□ 0.092e-7■■□□□ 14.2
GOPC-201ENST00000052569 EIF3HO15372 352 aaKnown RBP eCLIP15.46■□□□□ 0.061e-7■■□□□ 13.4
GOPC-201ENST00000052569 RBM15Q96T37 977 aaKnown RBP eCLIP15.45■□□□□ 0.069e-7■■□□□ 13.3
GOPC-201ENST00000052569 PPIGQ13427 754 aaKnown RBP eCLIP14.1□□□□□ -0.153e-7■■□□□ 11.4
GOPC-201ENST00000052569 SRSF9Q13242 221 aaKnown RBP eCLIP12.34□□□□□ -0.432e-7■□□□□ 10
GOPC-201ENST00000052569 UPF1Q92900 1129 aaKnown RBP eCLIP14.46□□□□□ -0.091e-6■□□□□ 9.1
GOPC-201ENST00000052569 EIF3DO15371 548 aaKnown RBP eCLIP15.33■□□□□ 0.052e-9■□□□□ 8.9
GOPC-201ENST00000052569 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16■□□□□ 0.152e-13■□□□□ 8.4
Retrieved 30 of 30 RNA–protein pairs in 8.4 ms