RNA–Protein interactions for RNA: ENSMUST00000226039.1

Trim38-203, Transcript of Tripartite motif-containing 38, mousemouse

APPRIS P1 BASIC

Gene Trim38, Length 1,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38-203ENSMUST00000226039 Chic1Q8CBW7 227 aa17.5■□□□□ 0.39
Trim38-203ENSMUST00000226039 Mapk8ip2Q9ERE9 830 aa16.31■□□□□ 0.2
Trim38-203ENSMUST00000226039 Phf23Q8BSN5 401 aa15.95■□□□□ 0.14
Trim38-203ENSMUST00000226039 Plppr3Q7TPB0 716 aa15.94■□□□□ 0.14
Trim38-203ENSMUST00000226039 Gab3Q8BSM5 595 aa15.42■□□□□ 0.06
Trim38-203ENSMUST00000226039 NischQ80TM9 1593 aa15.25■□□□□ 0.03
Trim38-203ENSMUST00000226039 Kcna4Q61423 654 aa15.21■□□□□ 0.03
Trim38-203ENSMUST00000226039 Gm35339A0A140LHH9 1649 aa14.97□□□□□ -0.01
Trim38-203ENSMUST00000226039 Abcc9P70170 1546 aa14.87□□□□□ -0.03
Trim38-203ENSMUST00000226039 Senp3Q9EP97 568 aaKnown RBP14.85□□□□□ -0.03
Trim38-203ENSMUST00000226039 Rtl1Q7M732 1744 aa14.47□□□□□ -0.09
Trim38-203ENSMUST00000226039 Abcc8B2RUS7 1588 aa14.44□□□□□ -0.1
Trim38-203ENSMUST00000226039 Ccdc180J3QNE4 1664 aa14.21□□□□□ -0.13
Trim38-203ENSMUST00000226039 Rhox8Q6VSS7 320 aa14.21□□□□□ -0.13
Trim38-203ENSMUST00000226039 Ppargc1bQ8VHJ7 1014 aa14.06□□□□□ -0.16
Trim38-203ENSMUST00000226039 Ube2uB1AUC4 352 aa13.91□□□□□ -0.18
Trim38-203ENSMUST00000226039 Zcchc6Q5BLK4 1491 aaKnown RBP13.86□□□□□ -0.19
Trim38-203ENSMUST00000226039 Rpgrip1Q9EPQ2 1331 aa13.84□□□□□ -0.19
Trim38-203ENSMUST00000226039 Dcaf1Q80TR8 1506 aa13.57□□□□□ -0.24
Trim38-203ENSMUST00000226039 Dmrt2Q8BG36 561 aa13.56□□□□□ -0.24
Trim38-203ENSMUST00000226039 Acin1Q9JIX8 1338 aaKnown RBP13.51□□□□□ -0.25
Trim38-203ENSMUST00000226039 HrcG5E8J6 738 aa13.45□□□□□ -0.26
Trim38-203ENSMUST00000226039 Rb1cc1Q9ESK9 1588 aa13.39□□□□□ -0.27
Trim38-203ENSMUST00000226039 ScribQ80U72 1612 aa13.36□□□□□ -0.27
Trim38-203ENSMUST00000226039 Slc4a1apE9PX68 744 aa13.32□□□□□ -0.28
Trim38-203ENSMUST00000226039 Baz1aO88379 1555 aa13.26□□□□□ -0.29
Trim38-203ENSMUST00000226039 Ehmt2Q9Z148 1263 aaKnown RBP13.18□□□□□ -0.3
Trim38-203ENSMUST00000226039 Ccdc136Q3TVA9 1136 aa13.16□□□□□ -0.3
Trim38-203ENSMUST00000226039 Kdm5dQ62240 1548 aa13.14□□□□□ -0.31
Trim38-203ENSMUST00000226039 Trap1aP19473 224 aa13.11□□□□□ -0.31
Trim38-203ENSMUST00000226039 Pcgf6Q99NA9 353 aa13.05□□□□□ -0.32
Trim38-203ENSMUST00000226039 Trim41Q5NCC3 630 aa13.03□□□□□ -0.32
Trim38-203ENSMUST00000226039 Cep164Q5DU05 1446 aa13□□□□□ -0.33
Trim38-203ENSMUST00000226039 Smarca2Q6DIC0 1577 aa13□□□□□ -0.33
Trim38-203ENSMUST00000226039 Crybg2B7ZCC2 1516 aa12.99□□□□□ -0.33
Trim38-203ENSMUST00000226039 NacadQ5SWP3 1504 aa12.99□□□□□ -0.33
Trim38-203ENSMUST00000226039 Fam71e1A1L3C1 212 aa12.89□□□□□ -0.35
Trim38-203ENSMUST00000226039 Hoxd11P23813 323 aa12.78□□□□□ -0.36
Trim38-203ENSMUST00000226039 Supt5hO55201 1082 aaKnown RBP12.76□□□□□ -0.37
Trim38-203ENSMUST00000226039 Rsf1E9PWW9 1441 aaKnown RBP12.72□□□□□ -0.37
Trim38-203ENSMUST00000226039 Atf5O70191 283 aa12.72□□□□□ -0.37
Trim38-203ENSMUST00000226039 Sycp2Q9CUU3 1500 aa12.71□□□□□ -0.38
Trim38-203ENSMUST00000226039 Brd4Q9ESU6 1400 aaKnown RBP12.64□□□□□ -0.39
Trim38-203ENSMUST00000226039 Golga3P55937 1487 aa12.61□□□□□ -0.39
Trim38-203ENSMUST00000226039 Ccdc88bQ4QRL3 1481 aa12.6□□□□□ -0.39
Trim38-203ENSMUST00000226039 NefmP08553 848 aa12.58□□□□□ -0.4
Trim38-203ENSMUST00000226039 Cecr2E9Q2Z1 1453 aa12.56□□□□□ -0.4
Trim38-203ENSMUST00000226039 Cngb1E1AZ71 1325 aa12.56□□□□□ -0.4
Trim38-203ENSMUST00000226039 Neurod1Q60867 357 aa12.54□□□□□ -0.4
Trim38-203ENSMUST00000226039 Synj1Q8CHC4 1574 aa12.53□□□□□ -0.4
Trim38-203ENSMUST00000226039 Mier1Q5UAK0 511 aa12.5□□□□□ -0.41
Trim38-203ENSMUST00000226039 1700123L14RikQ3V2K7 440 aa12.5□□□□□ -0.41
Trim38-203ENSMUST00000226039 Top2bQ64511 1612 aa12.49□□□□□ -0.41
Trim38-203ENSMUST00000226039 Ppp4r2Q0VGB7 417 aa12.47□□□□□ -0.41
Trim38-203ENSMUST00000226039 Zeb1Q64318 1117 aa12.47□□□□□ -0.41
Trim38-203ENSMUST00000226039 CftrP26361 1476 aa12.43□□□□□ -0.42
Trim38-203ENSMUST00000226039 BicraF8VPZ9 1578 aa12.41□□□□□ -0.42
Trim38-203ENSMUST00000226039 AcrbpQ3V140 540 aa12.4□□□□□ -0.42
Trim38-203ENSMUST00000226039 Sall2Q9QX96 1004 aa12.39□□□□□ -0.43
Trim38-203ENSMUST00000226039 Hs6st3Q9QYK4 470 aa12.38□□□□□ -0.43
Trim38-203ENSMUST00000226039 Cttnbp2B9EJA2 1648 aa12.37□□□□□ -0.43
Trim38-203ENSMUST00000226039 Nlrp6Q91WS2 869 aa12.37□□□□□ -0.43
Trim38-203ENSMUST00000226039 Pde4cQ3UEI1 686 aa12.36□□□□□ -0.43
Trim38-203ENSMUST00000226039 Rapgef2Q8CHG7 1496 aa12.32□□□□□ -0.44
Trim38-203ENSMUST00000226039 Cc2d2aQ8CFW7 1633 aa12.32□□□□□ -0.44
Trim38-203ENSMUST00000226039 Las1lA2BE28 776 aaKnown RBP12.32□□□□□ -0.44
Trim38-203ENSMUST00000226039 Chrna2Q91X60 512 aa12.3□□□□□ -0.44
Trim38-203ENSMUST00000226039 Anks4bQ8K3X6 423 aa12.27□□□□□ -0.44
Trim38-203ENSMUST00000226039 Dnajc5bQ9CQ94 199 aa12.26□□□□□ -0.45
Trim38-203ENSMUST00000226039 Top2aQ01320 1528 aaKnown RBP12.26□□□□□ -0.45
Trim38-203ENSMUST00000226039 Esf1Q3V1V3 845 aaKnown RBP12.25□□□□□ -0.45
Trim38-203ENSMUST00000226039 Fmn1Q05860 1466 aa12.23□□□□□ -0.45
Trim38-203ENSMUST00000226039 Cdca7Q9D0M2 382 aa12.22□□□□□ -0.45
Trim38-203ENSMUST00000226039 Smarca4Q3TKT4 1613 aaKnown RBP12.21□□□□□ -0.45
Trim38-203ENSMUST00000226039 Cep162Q6ZQ06 1403 aa12.19□□□□□ -0.46
Trim38-203ENSMUST00000226039 UbtfP25976 765 aaKnown RBP12.18□□□□□ -0.46
Trim38-203ENSMUST00000226039 Aebp2Q9Z248 504 aaKnown RBP12.18□□□□□ -0.46
Trim38-203ENSMUST00000226039 ClspnQ80YR7 1315 aa12.16□□□□□ -0.46
Trim38-203ENSMUST00000226039 Rsph4aQ8BYM7 716 aa12.14□□□□□ -0.47
Trim38-203ENSMUST00000226039 Eif4g1Q6NZJ6 1600 aaKnown RBP12.14□□□□□ -0.47
Trim38-203ENSMUST00000226039 Tshz2Q68FE9 1030 aa12.13□□□□□ -0.47
Trim38-203ENSMUST00000226039 Rtn4Q99P72 1162 aaKnown RBP12.13□□□□□ -0.47
Trim38-203ENSMUST00000226039 Znf219Q6IQX8 726 aa12.12□□□□□ -0.47
Trim38-203ENSMUST00000226039 Wdr66E9Q743 1299 aa12.1□□□□□ -0.47
Trim38-203ENSMUST00000226039 Csrnp3P59055 597 aa12.1□□□□□ -0.47
Trim38-203ENSMUST00000226039 Cdk11bP24788 784 aaKnown RBP12.08□□□□□ -0.48
Trim38-203ENSMUST00000226039 Nop58Q6DFW4 536 aaKnown RBP12.06□□□□□ -0.48
Trim38-203ENSMUST00000226039 Ncapd3Q6ZQK0 1506 aa12.05□□□□□ -0.48
Trim38-203ENSMUST00000226039 TonslQ6NZL6 1363 aa12.04□□□□□ -0.48
Trim38-203ENSMUST00000226039 Iqgap2Q3UQ44 1575 aa12.01□□□□□ -0.49
Trim38-203ENSMUST00000226039 Clip1Q922J3 1391 aa12.01□□□□□ -0.49
Trim38-203ENSMUST00000226039 Aplp2Q06335 707 aa12.01□□□□□ -0.49
Trim38-203ENSMUST00000226039 Myt1lP97500 1187 aa12□□□□□ -0.49
Trim38-203ENSMUST00000226039 TnnQ80Z71 1560 aa12□□□□□ -0.49
Trim38-203ENSMUST00000226039 Rimbp2Q80U40 1072 aa11.99□□□□□ -0.49
Trim38-203ENSMUST00000226039 Prm3Q62100 101 aa11.98□□□□□ -0.49
Trim38-203ENSMUST00000226039 Prdm10Q3UTQ7 1184 aa11.95□□□□□ -0.5
Trim38-203ENSMUST00000226039 Kdm5bQ80Y84 1544 aa11.94□□□□□ -0.5
Trim38-203ENSMUST00000226039 Arhgap35Q91YM2 1499 aa11.93□□□□□ -0.5
Trim38-203ENSMUST00000226039 Npm2Q80W85 207 aa11.93□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 80.9 ms