RNA–Protein interactions for RNA: ENSMUST00000213392.1

Scn10a-202, Transcript of Sodium channel protein type 10 subunit alpha, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Scn10a, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10a-202ENSMUST00000213392 Rhox8Q6VSS7 320 aa19.61■□□□□ 0.73
Scn10a-202ENSMUST00000213392 Rpgrip1Q9EPQ2 1331 aa17.88■□□□□ 0.45
Scn10a-202ENSMUST00000213392 Ehmt2Q9Z148 1263 aaKnown RBP17.87■□□□□ 0.45
Scn10a-202ENSMUST00000213392 Ccdc136Q3TVA9 1136 aa17.41■□□□□ 0.38
Scn10a-202ENSMUST00000213392 Wdr66E9Q743 1299 aa17.3■□□□□ 0.36
Scn10a-202ENSMUST00000213392 Cngb1E1AZ71 1325 aa17.27■□□□□ 0.36
Scn10a-202ENSMUST00000213392 Las1lA2BE28 776 aaKnown RBP17.25■□□□□ 0.35
Scn10a-202ENSMUST00000213392 Esf1Q3V1V3 845 aaKnown RBP17.23■□□□□ 0.35
Scn10a-202ENSMUST00000213392 Zeb1Q64318 1117 aa17.16■□□□□ 0.34
Scn10a-202ENSMUST00000213392 Gab3Q8BSM5 595 aa17.13■□□□□ 0.33
Scn10a-202ENSMUST00000213392 Ube2uB1AUC4 352 aa17.08■□□□□ 0.32
Scn10a-202ENSMUST00000213392 Npm2Q80W85 207 aa16.9■□□□□ 0.3
Scn10a-202ENSMUST00000213392 Trim41Q5NCC3 630 aa16.9■□□□□ 0.3
Scn10a-202ENSMUST00000213392 Pelp1Q9DBD5 1123 aaKnown RBP16.87■□□□□ 0.29
Scn10a-202ENSMUST00000213392 Myt1lP97500 1187 aa16.83■□□□□ 0.29
Scn10a-202ENSMUST00000213392 NischQ80TM9 1593 aa16.72■□□□□ 0.27
Scn10a-202ENSMUST00000213392 Acin1Q9JIX8 1338 aaKnown RBP16.61■□□□□ 0.25
Scn10a-202ENSMUST00000213392 UbtfP25976 765 aaKnown RBP16.54■□□□□ 0.24
Scn10a-202ENSMUST00000213392 CenpbP27790 599 aa16.47■□□□□ 0.23
Scn10a-202ENSMUST00000213392 NefmP08553 848 aa16.46■□□□□ 0.22
Scn10a-202ENSMUST00000213392 Slc24a1Q91WD8 1130 aa16.4■□□□□ 0.22
Scn10a-202ENSMUST00000213392 Amer1Q7TS75 1132 aa16.37■□□□□ 0.21
Scn10a-202ENSMUST00000213392 Stra8P70278 393 aa16.28■□□□□ 0.2
Scn10a-202ENSMUST00000213392 Ccdc180J3QNE4 1664 aa16.17■□□□□ 0.18
Scn10a-202ENSMUST00000213392 Il27Q8K3I6 234 aa16.16■□□□□ 0.18
Scn10a-202ENSMUST00000213392 Cdk11bP24788 784 aaKnown RBP16.13■□□□□ 0.17
Scn10a-202ENSMUST00000213392 HrcG5E8J6 738 aa16.13■□□□□ 0.17
Scn10a-202ENSMUST00000213392 Pcgf6Q99NA9 353 aa16.12■□□□□ 0.17
Scn10a-202ENSMUST00000213392 Ap3b1Q9Z1T1 1105 aa16.02■□□□□ 0.16
Scn10a-202ENSMUST00000213392 Ppargc1bQ8VHJ7 1014 aa16.02■□□□□ 0.15
Scn10a-202ENSMUST00000213392 Fam50aQ9WV03 339 aaKnown RBP16■□□□□ 0.15
Scn10a-202ENSMUST00000213392 Ttbk1Q6PCN3 1308 aa15.99■□□□□ 0.15
Scn10a-202ENSMUST00000213392 Neurod1Q60867 357 aa15.98■□□□□ 0.15
Scn10a-202ENSMUST00000213392 Nop58Q6DFW4 536 aaKnown RBP15.95■□□□□ 0.14
Scn10a-202ENSMUST00000213392 NclP09405 707 aaKnown RBP15.93■□□□□ 0.14
Scn10a-202ENSMUST00000213392 NrdcQ8BHG1 1161 aa15.92■□□□□ 0.14
Scn10a-202ENSMUST00000213392 Rtl1Q7M732 1744 aa15.91■□□□□ 0.14
Scn10a-202ENSMUST00000213392 Eif5bQ05D44 1216 aaKnown RBP15.89■□□□□ 0.13
Scn10a-202ENSMUST00000213392 Supt5hO55201 1082 aaKnown RBP15.86■□□□□ 0.13
Scn10a-202ENSMUST00000213392 Zcchc6Q5BLK4 1491 aaKnown RBP15.85■□□□□ 0.13
Scn10a-202ENSMUST00000213392 Tnnt3Q9QZ47 272 aa15.84■□□□□ 0.13
Scn10a-202ENSMUST00000213392 Anp32bQ9EST5 272 aaKnown RBP15.83■□□□□ 0.12
Scn10a-202ENSMUST00000213392 4933416C03RikQ3V063 378 aa15.82■□□□□ 0.12
Scn10a-202ENSMUST00000213392 NeflP08551 543 aa15.77■□□□□ 0.12
Scn10a-202ENSMUST00000213392 TonslQ6NZL6 1363 aa15.76■□□□□ 0.11
Scn10a-202ENSMUST00000213392 Os9Q8K2C7 672 aa15.75■□□□□ 0.11
Scn10a-202ENSMUST00000213392 Mier1Q5UAK0 511 aa15.69■□□□□ 0.1
Scn10a-202ENSMUST00000213392 Abcc9P70170 1546 aa15.69■□□□□ 0.1
Scn10a-202ENSMUST00000213392 Myt1Q8CFC2 1127 aa15.68■□□□□ 0.1
Scn10a-202ENSMUST00000213392 4930567H17RikQ3V0K5 233 aa15.64■□□□□ 0.09
Scn10a-202ENSMUST00000213392 Gm35339A0A140LHH9 1649 aa15.63■□□□□ 0.09
Scn10a-202ENSMUST00000213392 Zbtb7cQ8VCZ7 619 aa15.52■□□□□ 0.08
Scn10a-202ENSMUST00000213392 Lmod2Q3UHZ5 550 aa15.52■□□□□ 0.07
Scn10a-202ENSMUST00000213392 Plekhg3Q4VAC9 1341 aa15.51■□□□□ 0.07
Scn10a-202ENSMUST00000213392 ClspnQ80YR7 1315 aa15.42■□□□□ 0.06
Scn10a-202ENSMUST00000213392 Rtl5Q5DTT4 599 aa15.39■□□□□ 0.05
Scn10a-202ENSMUST00000213392 Mapk8ip2Q9ERE9 830 aa15.39■□□□□ 0.05
Scn10a-202ENSMUST00000213392 Hnrnpul2Q00PI9 745 aaKnown RBP15.38■□□□□ 0.05
Scn10a-202ENSMUST00000213392 Zbtb4Q5F293 982 aa15.36■□□□□ 0.05
Scn10a-202ENSMUST00000213392 Npm1Q61937 292 aaKnown RBP15.36■□□□□ 0.05
Scn10a-202ENSMUST00000213392 Anp32aO35381 247 aa15.3■□□□□ 0.04
Scn10a-202ENSMUST00000213392 Eid3Q3V124 375 aa15.3■□□□□ 0.04
Scn10a-202ENSMUST00000213392 Chic1Q8CBW7 227 aa15.3■□□□□ 0.04
Scn10a-202ENSMUST00000213392 Gm38655A0A286YDK6 273 aa15.28■□□□□ 0.04
Scn10a-202ENSMUST00000213392 DaxxO35613 739 aa15.25■□□□□ 0.03
Scn10a-202ENSMUST00000213392 Ifnlr1Q8CGK5 535 aa15.25■□□□□ 0.03
Scn10a-202ENSMUST00000213392 Prdm10Q3UTQ7 1184 aa15.22■□□□□ 0.03
Scn10a-202ENSMUST00000213392 Erich6D3Z6S9 713 aa15.22■□□□□ 0.03
Scn10a-202ENSMUST00000213392 Sall2Q9QX96 1004 aa15.21■□□□□ 0.03
Scn10a-202ENSMUST00000213392 Gm13697A2AK42 830 aa15.2■□□□□ 0.02
Scn10a-202ENSMUST00000213392 Nlrp6Q91WS2 869 aa15.19■□□□□ 0.02
Scn10a-202ENSMUST00000213392 Polr3glQ8R0C0 218 aa15.17■□□□□ 0.02
Scn10a-202ENSMUST00000213392 Atp1b4Q99ME6 356 aa15.15■□□□□ 0.02
Scn10a-202ENSMUST00000213392 Csrnp3P59055 597 aa15.15■□□□□ 0.02
Scn10a-202ENSMUST00000213392 Clip1Q922J3 1391 aa15.13■□□□□ 0.01
Scn10a-202ENSMUST00000213392 ArxO35085 564 aa15.12■□□□□ 0.01
Scn10a-202ENSMUST00000213392 DiexfQ8BTT6 772 aaKnown RBP15.09■□□□□ 0.01
Scn10a-202ENSMUST00000213392 Fkbp15Q6P9Q6 1216 aaKnown RBP15.08■□□□□ 0.01
Scn10a-202ENSMUST00000213392 Anks4bQ8K3X6 423 aa15.08■□□□□ 0.01
Scn10a-202ENSMUST00000213392 Abcc8B2RUS7 1588 aa15.07■□□□□ 0
Scn10a-202ENSMUST00000213392 Dcaf1Q80TR8 1506 aa15.01□□□□□ -0.01
Scn10a-202ENSMUST00000213392 Brd4Q9ESU6 1400 aaKnown RBP15□□□□□ -0.01
Scn10a-202ENSMUST00000213392 Cep164Q5DU05 1446 aa15□□□□□ -0.01
Scn10a-202ENSMUST00000213392 Ppp4r2Q0VGB7 417 aa14.98□□□□□ -0.01
Scn10a-202ENSMUST00000213392 Calr4Q3TQS0 420 aa14.97□□□□□ -0.01
Scn10a-202ENSMUST00000213392 Gm13695A2AK44 830 aa14.96□□□□□ -0.01
Scn10a-202ENSMUST00000213392 Rangap1P46061 589 aaKnown RBP14.96□□□□□ -0.02
Scn10a-202ENSMUST00000213392 Chic2Q9D9G3 165 aa14.94□□□□□ -0.02
Scn10a-202ENSMUST00000213392 Aplp2Q06335 707 aa14.93□□□□□ -0.02
Scn10a-202ENSMUST00000213392 Ccer2J3QPU5 274 aa14.93□□□□□ -0.02
Scn10a-202ENSMUST00000213392 Rad21Q61550 635 aaKnown RBP14.92□□□□□ -0.02
Scn10a-202ENSMUST00000213392 Hdac5Q9Z2V6 1113 aa14.9□□□□□ -0.02
Scn10a-202ENSMUST00000213392 Mrs2Q5NCE8 434 aa14.86□□□□□ -0.03
Scn10a-202ENSMUST00000213392 Plppr3Q7TPB0 716 aa14.84□□□□□ -0.03
Scn10a-202ENSMUST00000213392 BlmO88700 1416 aa14.82□□□□□ -0.04
Scn10a-202ENSMUST00000213392 Wdr43Q6ZQL4 677 aaKnown RBP14.81□□□□□ -0.04
Scn10a-202ENSMUST00000213392 Ubl4bQ9CQ84 188 aa14.8□□□□□ -0.04
Scn10a-202ENSMUST00000213392 Upf2A2AT37 1269 aaKnown RBP14.8□□□□□ -0.04
Scn10a-202ENSMUST00000213392 Rb1cc1Q9ESK9 1588 aa14.78□□□□□ -0.04
Scn10a-202ENSMUST00000213392 Aebp2Q9Z248 504 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 192.5 ms