RNA–Protein interactions for RNA: ENSMUST00000209085.1

Smarca2-246, Transcript of Probable global transcription activator SNF2L2, mousemouse

TSL 5 BASIC

Gene Smarca2, Length 1,841 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2-246ENSMUST00000209085 Mapk8ip2Q9ERE9 830 aa14.25□□□□□ -0.13
Smarca2-246ENSMUST00000209085 Chic1Q8CBW7 227 aa13.77□□□□□ -0.21
Smarca2-246ENSMUST00000209085 Ube2uB1AUC4 352 aa13.54□□□□□ -0.24
Smarca2-246ENSMUST00000209085 Plppr3Q7TPB0 716 aa12.61□□□□□ -0.39
Smarca2-246ENSMUST00000209085 Phf23Q8BSN5 401 aa12.53□□□□□ -0.4
Smarca2-246ENSMUST00000209085 DiexfQ8BTT6 772 aaKnown RBP12.37□□□□□ -0.43
Smarca2-246ENSMUST00000209085 Gab3Q8BSM5 595 aa12.17□□□□□ -0.46
Smarca2-246ENSMUST00000209085 Ehmt2Q9Z148 1263 aaKnown RBP12.12□□□□□ -0.47
Smarca2-246ENSMUST00000209085 CatipB9EKE5 520 aa12.06□□□□□ -0.48
Smarca2-246ENSMUST00000209085 Kcna4Q61423 654 aa12.05□□□□□ -0.48
Smarca2-246ENSMUST00000209085 Rpgrip1Q9EPQ2 1331 aa11.98□□□□□ -0.49
Smarca2-246ENSMUST00000209085 Ttbk1Q6PCN3 1308 aa11.97□□□□□ -0.49
Smarca2-246ENSMUST00000209085 ArxO35085 564 aa11.77□□□□□ -0.52
Smarca2-246ENSMUST00000209085 Senp3Q9EP97 568 aaKnown RBP11.74□□□□□ -0.53
Smarca2-246ENSMUST00000209085 Ppargc1bQ8VHJ7 1014 aa11.63□□□□□ -0.55
Smarca2-246ENSMUST00000209085 Rtl1Q7M732 1744 aa11.59□□□□□ -0.55
Smarca2-246ENSMUST00000209085 Ccdc180J3QNE4 1664 aa11.37□□□□□ -0.59
Smarca2-246ENSMUST00000209085 Acin1Q9JIX8 1338 aaKnown RBP11.3□□□□□ -0.6
Smarca2-246ENSMUST00000209085 Arid3aQ62431 601 aa11.3□□□□□ -0.6
Smarca2-246ENSMUST00000209085 Vsig10D3YX43 558 aa11.28□□□□□ -0.6
Smarca2-246ENSMUST00000209085 Taok2Q6ZQ29 1240 aa11.28□□□□□ -0.6
Smarca2-246ENSMUST00000209085 Fam71e1A1L3C1 212 aa11.26□□□□□ -0.61
Smarca2-246ENSMUST00000209085 Pcgf6Q99NA9 353 aa11.19□□□□□ -0.62
Smarca2-246ENSMUST00000209085 Rhox8Q6VSS7 320 aa11.16□□□□□ -0.62
Smarca2-246ENSMUST00000209085 Prdm16A2A935 1275 aa11.14□□□□□ -0.63
Smarca2-246ENSMUST00000209085 Prdm10Q3UTQ7 1184 aa11.12□□□□□ -0.63
Smarca2-246ENSMUST00000209085 Slc4a1apE9PX68 744 aa11.07□□□□□ -0.64
Smarca2-246ENSMUST00000209085 Myt1Q8CFC2 1127 aa11.06□□□□□ -0.64
Smarca2-246ENSMUST00000209085 Fam163aQ8CAA5 168 aa11.04□□□□□ -0.64
Smarca2-246ENSMUST00000209085 UbtfP25976 765 aaKnown RBP11.02□□□□□ -0.65
Smarca2-246ENSMUST00000209085 Las1lA2BE28 776 aaKnown RBP11□□□□□ -0.65
Smarca2-246ENSMUST00000209085 Bcl11aQ9QYE3 773 aa11□□□□□ -0.65
Smarca2-246ENSMUST00000209085 Aplp2Q06335 707 aa11□□□□□ -0.65
Smarca2-246ENSMUST00000209085 NischQ80TM9 1593 aa10.98□□□□□ -0.65
Smarca2-246ENSMUST00000209085 Dcaf1Q80TR8 1506 aa10.93□□□□□ -0.66
Smarca2-246ENSMUST00000209085 Npm2Q80W85 207 aa10.91□□□□□ -0.66
Smarca2-246ENSMUST00000209085 Pelp1Q9DBD5 1123 aaKnown RBP10.91□□□□□ -0.66
Smarca2-246ENSMUST00000209085 Trim41Q5NCC3 630 aa10.84□□□□□ -0.67
Smarca2-246ENSMUST00000209085 Ncbp3Q8BZR9 615 aaKnown RBP10.84□□□□□ -0.67
Smarca2-246ENSMUST00000209085 Q8BT18 775 aa10.83□□□□□ -0.68
Smarca2-246ENSMUST00000209085 CenpbP27790 599 aa10.81□□□□□ -0.68
Smarca2-246ENSMUST00000209085 Abcc9P70170 1546 aa10.81□□□□□ -0.68
Smarca2-246ENSMUST00000209085 Dmrt2Q8BG36 561 aa10.8□□□□□ -0.68
Smarca2-246ENSMUST00000209085 Ecm2Q5FW85 670 aa10.77□□□□□ -0.68
Smarca2-246ENSMUST00000209085 Ripply1Q2WG77 201 aa10.77□□□□□ -0.69
Smarca2-246ENSMUST00000209085 Zcchc6Q5BLK4 1491 aaKnown RBP10.76□□□□□ -0.69
Smarca2-246ENSMUST00000209085 Neurod1Q60867 357 aa10.75□□□□□ -0.69
Smarca2-246ENSMUST00000209085 4930567H17RikQ3V0K5 233 aa10.74□□□□□ -0.69
Smarca2-246ENSMUST00000209085 Gm35339A0A140LHH9 1649 aa10.72□□□□□ -0.69
Smarca2-246ENSMUST00000209085 Amer1Q7TS75 1132 aa10.71□□□□□ -0.69
Smarca2-246ENSMUST00000209085 AcrbpQ3V140 540 aa10.7□□□□□ -0.7
Smarca2-246ENSMUST00000209085 Rtn4Q99P72 1162 aaKnown RBP10.67□□□□□ -0.7
Smarca2-246ENSMUST00000209085 Supt5hO55201 1082 aaKnown RBP10.66□□□□□ -0.7
Smarca2-246ENSMUST00000209085 Pde4cQ3UEI1 686 aa10.61□□□□□ -0.71
Smarca2-246ENSMUST00000209085 1700123L14RikQ3V2K7 440 aa10.61□□□□□ -0.71
Smarca2-246ENSMUST00000209085 Os9Q8K2C7 672 aa10.56□□□□□ -0.72
Smarca2-246ENSMUST00000209085 GapdhsQ64467 440 aa10.55□□□□□ -0.72
Smarca2-246ENSMUST00000209085 Anks4bQ8K3X6 423 aa10.53□□□□□ -0.72
Smarca2-246ENSMUST00000209085 Cngb1E1AZ71 1325 aa10.52□□□□□ -0.73
Smarca2-246ENSMUST00000209085 HrcG5E8J6 738 aa10.5□□□□□ -0.73
Smarca2-246ENSMUST00000209085 Rsph4aQ8BYM7 716 aa10.5□□□□□ -0.73
Smarca2-246ENSMUST00000209085 Tshz2Q68FE9 1030 aa10.46□□□□□ -0.74
Smarca2-246ENSMUST00000209085 Nlrp6Q91WS2 869 aa10.4□□□□□ -0.74
Smarca2-246ENSMUST00000209085 Csrnp3P59055 597 aa10.37□□□□□ -0.75
Smarca2-246ENSMUST00000209085 Gtf3c5Q8R2T8 520 aa10.36□□□□□ -0.75
Smarca2-246ENSMUST00000209085 PrkcshO08795 521 aa10.35□□□□□ -0.75
Smarca2-246ENSMUST00000209085 Trap1aP19473 224 aa10.35□□□□□ -0.75
Smarca2-246ENSMUST00000209085 Zbtb7cQ8VCZ7 619 aa10.35□□□□□ -0.75
Smarca2-246ENSMUST00000209085 BccipQ9CWI3 316 aa10.33□□□□□ -0.76
Smarca2-246ENSMUST00000209085 4933416C03RikQ3V063 378 aa10.3□□□□□ -0.76
Smarca2-246ENSMUST00000209085 Abcc8B2RUS7 1588 aa10.28□□□□□ -0.76
Smarca2-246ENSMUST00000209085 NefmP08553 848 aa10.25□□□□□ -0.77
Smarca2-246ENSMUST00000209085 Fbxo3Q9DC63 480 aa10.25□□□□□ -0.77
Smarca2-246ENSMUST00000209085 TimelessQ9R1X4 1197 aa10.25□□□□□ -0.77
Smarca2-246ENSMUST00000209085 Esf1Q3V1V3 845 aaKnown RBP10.21□□□□□ -0.77
Smarca2-246ENSMUST00000209085 Prm3Q62100 101 aa10.2□□□□□ -0.78
Smarca2-246ENSMUST00000209085 Sall2Q9QX96 1004 aa10.19□□□□□ -0.78
Smarca2-246ENSMUST00000209085 Znf326O88291 580 aa10.15□□□□□ -0.78
Smarca2-246ENSMUST00000209085 Eif5bQ05D44 1216 aaKnown RBP10.13□□□□□ -0.79
Smarca2-246ENSMUST00000209085 Cnksr2Q80YA9 1032 aa10.13□□□□□ -0.79
Smarca2-246ENSMUST00000209085 Zeb1Q64318 1117 aa10.12□□□□□ -0.79
Smarca2-246ENSMUST00000209085 Plcd4Q8K3R3 807 aa10.11□□□□□ -0.79
Smarca2-246ENSMUST00000209085 Cdk11bP24788 784 aaKnown RBP10.1□□□□□ -0.79
Smarca2-246ENSMUST00000209085 Cep164Q5DU05 1446 aa10.08□□□□□ -0.8
Smarca2-246ENSMUST00000209085 Hoxd11P23813 323 aa10.07□□□□□ -0.8
Smarca2-246ENSMUST00000209085 Ube2q2Q8K2Z8 378 aa10.06□□□□□ -0.8
Smarca2-246ENSMUST00000209085 Cdca7Q9D0M2 382 aa10.06□□□□□ -0.8
Smarca2-246ENSMUST00000209085 Rtl5Q5DTT4 599 aa10.03□□□□□ -0.8
Smarca2-246ENSMUST00000209085 Gm13697A2AK42 830 aa10.03□□□□□ -0.8
Smarca2-246ENSMUST00000209085 Atf5O70191 283 aa10.03□□□□□ -0.8
Smarca2-246ENSMUST00000209085 Stag3O70576 1240 aa10.03□□□□□ -0.8
Smarca2-246ENSMUST00000209085 Nop58Q6DFW4 536 aaKnown RBP10.03□□□□□ -0.8
Smarca2-246ENSMUST00000209085 Gtf3c3Q3TMP1 882 aa10□□□□□ -0.81
Smarca2-246ENSMUST00000209085 Rad21Q61550 635 aaKnown RBP10□□□□□ -0.81
Smarca2-246ENSMUST00000209085 ClspnQ80YR7 1315 aa9.98□□□□□ -0.81
Smarca2-246ENSMUST00000209085 Igsf3Q6ZQA6 1194 aa9.98□□□□□ -0.81
Smarca2-246ENSMUST00000209085 Ubap1lG3UW59 384 aa9.95□□□□□ -0.82
Smarca2-246ENSMUST00000209085 ArsiQ32KI9 573 aa9.93□□□□□ -0.82
Smarca2-246ENSMUST00000209085 Tnnt3Q9QZ47 272 aa9.93□□□□□ -0.82
Smarca2-246ENSMUST00000209085 Ppp4r2Q0VGB7 417 aa9.92□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 190 ms