RNA–Protein interactions for RNA: ENSMUST00000208751.1

Smarca2-242, Transcript of Probable global transcription activator SNF2L2, mousemouse

TSL 5 BASIC

Gene Smarca2, Length 1,846 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2-242ENSMUST00000208751 Chic1Q8CBW7 227 aa17.72■□□□□ 0.43
Smarca2-242ENSMUST00000208751 Mapk8ip2Q9ERE9 830 aa17.01■□□□□ 0.31
Smarca2-242ENSMUST00000208751 Phf23Q8BSN5 401 aa15.89■□□□□ 0.13
Smarca2-242ENSMUST00000208751 Plppr3Q7TPB0 716 aa15.54■□□□□ 0.08
Smarca2-242ENSMUST00000208751 Gab3Q8BSM5 595 aa15.33■□□□□ 0.04
Smarca2-242ENSMUST00000208751 Senp3Q9EP97 568 aaKnown RBP14.65□□□□□ -0.06
Smarca2-242ENSMUST00000208751 Kcna4Q61423 654 aa14.29□□□□□ -0.12
Smarca2-242ENSMUST00000208751 Gm35339A0A140LHH9 1649 aa14.24□□□□□ -0.13
Smarca2-242ENSMUST00000208751 NischQ80TM9 1593 aa14.18□□□□□ -0.14
Smarca2-242ENSMUST00000208751 Abcc9P70170 1546 aa13.75□□□□□ -0.21
Smarca2-242ENSMUST00000208751 Abcc8B2RUS7 1588 aa13.64□□□□□ -0.23
Smarca2-242ENSMUST00000208751 Trap1aP19473 224 aa13.01□□□□□ -0.33
Smarca2-242ENSMUST00000208751 ScribQ80U72 1612 aa12.99□□□□□ -0.33
Smarca2-242ENSMUST00000208751 Hoxd11P23813 323 aa12.86□□□□□ -0.35
Smarca2-242ENSMUST00000208751 Dmrt2Q8BG36 561 aa12.78□□□□□ -0.36
Smarca2-242ENSMUST00000208751 Ppargc1bQ8VHJ7 1014 aa12.67□□□□□ -0.38
Smarca2-242ENSMUST00000208751 Dcaf1Q80TR8 1506 aa12.63□□□□□ -0.39
Smarca2-242ENSMUST00000208751 Kdm5dQ62240 1548 aa12.62□□□□□ -0.39
Smarca2-242ENSMUST00000208751 NacadQ5SWP3 1504 aa12.61□□□□□ -0.39
Smarca2-242ENSMUST00000208751 Fam163aQ8CAA5 168 aa12.55□□□□□ -0.4
Smarca2-242ENSMUST00000208751 Rhox8Q6VSS7 320 aa12.52□□□□□ -0.41
Smarca2-242ENSMUST00000208751 Slc4a1apE9PX68 744 aa12.39□□□□□ -0.43
Smarca2-242ENSMUST00000208751 Rb1cc1Q9ESK9 1588 aa12.37□□□□□ -0.43
Smarca2-242ENSMUST00000208751 Znf219Q6IQX8 726 aa12.37□□□□□ -0.43
Smarca2-242ENSMUST00000208751 Sycp2Q9CUU3 1500 aa12.35□□□□□ -0.43
Smarca2-242ENSMUST00000208751 Chrna2Q91X60 512 aa12.29□□□□□ -0.44
Smarca2-242ENSMUST00000208751 Ccdc180J3QNE4 1664 aa12.24□□□□□ -0.45
Smarca2-242ENSMUST00000208751 Baz1aO88379 1555 aa12.22□□□□□ -0.45
Smarca2-242ENSMUST00000208751 Rsph4aQ8BYM7 716 aa12.16□□□□□ -0.46
Smarca2-242ENSMUST00000208751 Crybg2B7ZCC2 1516 aa12.15□□□□□ -0.46
Smarca2-242ENSMUST00000208751 BicraF8VPZ9 1578 aa12.14□□□□□ -0.47
Smarca2-242ENSMUST00000208751 Dnajc5bQ9CQ94 199 aa12.05□□□□□ -0.48
Smarca2-242ENSMUST00000208751 Atf5O70191 283 aa12.04□□□□□ -0.48
Smarca2-242ENSMUST00000208751 DiexfQ8BTT6 772 aaKnown RBP12.04□□□□□ -0.48
Smarca2-242ENSMUST00000208751 Zcchc6Q5BLK4 1491 aaKnown RBP12□□□□□ -0.49
Smarca2-242ENSMUST00000208751 Ppp4r2Q0VGB7 417 aa11.98□□□□□ -0.49
Smarca2-242ENSMUST00000208751 Hs6st3Q9QYK4 470 aa11.97□□□□□ -0.49
Smarca2-242ENSMUST00000208751 Rimbp2Q80U40 1072 aa11.96□□□□□ -0.49
Smarca2-242ENSMUST00000208751 Ube2uB1AUC4 352 aa11.92□□□□□ -0.5
Smarca2-242ENSMUST00000208751 Rtl1Q7M732 1744 aa11.9□□□□□ -0.5
Smarca2-242ENSMUST00000208751 Smarca2Q6DIC0 1577 aa11.9□□□□□ -0.5
Smarca2-242ENSMUST00000208751 Cecr2E9Q2Z1 1453 aa11.76□□□□□ -0.53
Smarca2-242ENSMUST00000208751 Pds5bQ4VA53 1446 aaKnown RBP11.74□□□□□ -0.53
Smarca2-242ENSMUST00000208751 1700123L14RikQ3V2K7 440 aa11.73□□□□□ -0.53
Smarca2-242ENSMUST00000208751 ArsiQ32KI9 573 aa11.7□□□□□ -0.54
Smarca2-242ENSMUST00000208751 Smarca4Q3TKT4 1613 aaKnown RBP11.69□□□□□ -0.54
Smarca2-242ENSMUST00000208751 Ccdc136Q3TVA9 1136 aa11.69□□□□□ -0.54
Smarca2-242ENSMUST00000208751 Atad2bE9Q166 1460 aaKnown RBP11.69□□□□□ -0.54
Smarca2-242ENSMUST00000208751 Akt1s1Q9D1F4 257 aa11.66□□□□□ -0.54
Smarca2-242ENSMUST00000208751 CatipB9EKE5 520 aa11.64□□□□□ -0.55
Smarca2-242ENSMUST00000208751 Thoc2B1AZI6 1594 aaKnown RBP11.62□□□□□ -0.55
Smarca2-242ENSMUST00000208751 Iqgap2Q3UQ44 1575 aa11.59□□□□□ -0.55
Smarca2-242ENSMUST00000208751 Brd4Q9ESU6 1400 aaKnown RBP11.58□□□□□ -0.56
Smarca2-242ENSMUST00000208751 CftrP26361 1476 aa11.55□□□□□ -0.56
Smarca2-242ENSMUST00000208751 Synj1Q8CHC4 1574 aa11.54□□□□□ -0.56
Smarca2-242ENSMUST00000208751 Trim41Q5NCC3 630 aa11.51□□□□□ -0.57
Smarca2-242ENSMUST00000208751 Cttnbp2B9EJA2 1648 aa11.5□□□□□ -0.57
Smarca2-242ENSMUST00000208751 Ercc6F8VPZ5 1481 aa11.49□□□□□ -0.57
Smarca2-242ENSMUST00000208751 Slc34a2Q9DBP0 697 aa11.48□□□□□ -0.57
Smarca2-242ENSMUST00000208751 Fam71e1A1L3C1 212 aa11.47□□□□□ -0.57
Smarca2-242ENSMUST00000208751 Wdr62Q3U3T8 1523 aa11.46□□□□□ -0.57
Smarca2-242ENSMUST00000208751 Bach1P97302 739 aa11.45□□□□□ -0.58
Smarca2-242ENSMUST00000208751 Frmpd1A2AKB4 1549 aa11.45□□□□□ -0.58
Smarca2-242ENSMUST00000208751 Cc2d2aQ8CFW7 1633 aa11.43□□□□□ -0.58
Smarca2-242ENSMUST00000208751 Esf1Q3V1V3 845 aaKnown RBP11.35□□□□□ -0.59
Smarca2-242ENSMUST00000208751 Ttbk1Q6PCN3 1308 aa11.33□□□□□ -0.59
Smarca2-242ENSMUST00000208751 Fam135aQ6NS59 1506 aa11.33□□□□□ -0.6
Smarca2-242ENSMUST00000208751 Sox12Q04890 314 aa11.32□□□□□ -0.6
Smarca2-242ENSMUST00000208751 Phldb1Q6PDH0 1371 aaKnown RBP11.32□□□□□ -0.6
Smarca2-242ENSMUST00000208751 Nlrp6Q91WS2 869 aa11.3□□□□□ -0.6
Smarca2-242ENSMUST00000208751 Unc13aQ4KUS2 1712 aa11.28□□□□□ -0.6
Smarca2-242ENSMUST00000208751 Golga3P55937 1487 aa11.27□□□□□ -0.61
Smarca2-242ENSMUST00000208751 Cdca7Q9D0M2 382 aa11.25□□□□□ -0.61
Smarca2-242ENSMUST00000208751 Top2bQ64511 1612 aa11.22□□□□□ -0.61
Smarca2-242ENSMUST00000208751 Cngb1E1AZ71 1325 aa11.21□□□□□ -0.61
Smarca2-242ENSMUST00000208751 Myt1Q8CFC2 1127 aa11.21□□□□□ -0.61
Smarca2-242ENSMUST00000208751 Ubl4bQ9CQ84 188 aa11.21□□□□□ -0.61
Smarca2-242ENSMUST00000208751 Baz1bQ9Z277 1479 aa11.2□□□□□ -0.62
Smarca2-242ENSMUST00000208751 WdpcpQ8C456 722 aa11.19□□□□□ -0.62
Smarca2-242ENSMUST00000208751 AcrbpQ3V140 540 aa11.18□□□□□ -0.62
Smarca2-242ENSMUST00000208751 Rsf1E9PWW9 1441 aaKnown RBP11.16□□□□□ -0.62
Smarca2-242ENSMUST00000208751 Amer1Q7TS75 1132 aa11.14□□□□□ -0.63
Smarca2-242ENSMUST00000208751 Lamc3Q9R0B6 1581 aa11.13□□□□□ -0.63
Smarca2-242ENSMUST00000208751 Kif15Q6P9L6 1387 aa11.12□□□□□ -0.63
Smarca2-242ENSMUST00000208751 C1qtnf12Q8R2Z0 308 aa11.12□□□□□ -0.63
Smarca2-242ENSMUST00000208751 TnnQ80Z71 1560 aa11.09□□□□□ -0.63
Smarca2-242ENSMUST00000208751 Fmn1Q05860 1466 aa11.09□□□□□ -0.63
Smarca2-242ENSMUST00000208751 Pde4cQ3UEI1 686 aa11.08□□□□□ -0.64
Smarca2-242ENSMUST00000208751 HrcG5E8J6 738 aa11.07□□□□□ -0.64
Smarca2-242ENSMUST00000208751 Mrc2Q64449 1479 aa11.07□□□□□ -0.64
Smarca2-242ENSMUST00000208751 Cux2P70298 1426 aa11.06□□□□□ -0.64
Smarca2-242ENSMUST00000208751 Ccdc88bQ4QRL3 1481 aa11.05□□□□□ -0.64
Smarca2-242ENSMUST00000208751 Npm2Q80W85 207 aa10.98□□□□□ -0.65
Smarca2-242ENSMUST00000208751 ArxO35085 564 aa10.98□□□□□ -0.65
Smarca2-242ENSMUST00000208751 Npm1Q61937 292 aaKnown RBP10.96□□□□□ -0.65
Smarca2-242ENSMUST00000208751 Ccdc18Q640L5 1455 aa10.96□□□□□ -0.65
Smarca2-242ENSMUST00000208751 Camsap1A2AHC3 1581 aa10.96□□□□□ -0.65
Smarca2-242ENSMUST00000208751 Riok3Q9DBU3 519 aaKnown RBP10.95□□□□□ -0.66
Smarca2-242ENSMUST00000208751 Prm3Q62100 101 aa10.94□□□□□ -0.66
Smarca2-242ENSMUST00000208751 Cep164Q5DU05 1446 aa10.94□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 199.9 ms