RNA–Protein interactions for RNA: ENSMUST00000199171.4

Sox2ot-215, mousemouse

TSL 1 (best) BASIC

Gene Sox2ot, Length 3,486 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2ot-215ENSMUST00000199171 NischQ80TM9 1593 aa15.33■□□□□ 0.04
Sox2ot-215ENSMUST00000199171 Gm35339A0A140LHH9 1649 aa14.98□□□□□ -0.01
Sox2ot-215ENSMUST00000199171 Abcc9P70170 1546 aa14.71□□□□□ -0.05
Sox2ot-215ENSMUST00000199171 Abcc8B2RUS7 1588 aa14.59□□□□□ -0.07
Sox2ot-215ENSMUST00000199171 Rhox8Q6VSS7 320 aa14.41□□□□□ -0.1
Sox2ot-215ENSMUST00000199171 Rtl1Q7M732 1744 aa14.08□□□□□ -0.16
Sox2ot-215ENSMUST00000199171 Rpgrip1Q9EPQ2 1331 aa13.94□□□□□ -0.18
Sox2ot-215ENSMUST00000199171 Ccdc180J3QNE4 1664 aa13.89□□□□□ -0.19
Sox2ot-215ENSMUST00000199171 ScribQ80U72 1612 aa13.82□□□□□ -0.2
Sox2ot-215ENSMUST00000199171 Kdm5dQ62240 1548 aa13.56□□□□□ -0.24
Sox2ot-215ENSMUST00000199171 NacadQ5SWP3 1504 aa13.47□□□□□ -0.25
Sox2ot-215ENSMUST00000199171 Ccdc136Q3TVA9 1136 aa13.41□□□□□ -0.26
Sox2ot-215ENSMUST00000199171 Rb1cc1Q9ESK9 1588 aa13.4□□□□□ -0.26
Sox2ot-215ENSMUST00000199171 Dcaf1Q80TR8 1506 aa13.39□□□□□ -0.27
Sox2ot-215ENSMUST00000199171 Acin1Q9JIX8 1338 aaKnown RBP13.36□□□□□ -0.27
Sox2ot-215ENSMUST00000199171 HrcG5E8J6 738 aa13.33□□□□□ -0.28
Sox2ot-215ENSMUST00000199171 Zcchc6Q5BLK4 1491 aaKnown RBP13.3□□□□□ -0.28
Sox2ot-215ENSMUST00000199171 Sycp2Q9CUU3 1500 aa13.18□□□□□ -0.3
Sox2ot-215ENSMUST00000199171 Baz1aO88379 1555 aa13.14□□□□□ -0.31
Sox2ot-215ENSMUST00000199171 Ehmt2Q9Z148 1263 aaKnown RBP13.08□□□□□ -0.32
Sox2ot-215ENSMUST00000199171 Trim41Q5NCC3 630 aa12.99□□□□□ -0.33
Sox2ot-215ENSMUST00000199171 BicraF8VPZ9 1578 aa12.94□□□□□ -0.34
Sox2ot-215ENSMUST00000199171 Esf1Q3V1V3 845 aaKnown RBP12.9□□□□□ -0.34
Sox2ot-215ENSMUST00000199171 Pcgf6Q99NA9 353 aa12.88□□□□□ -0.35
Sox2ot-215ENSMUST00000199171 Cngb1E1AZ71 1325 aa12.85□□□□□ -0.35
Sox2ot-215ENSMUST00000199171 Cecr2E9Q2Z1 1453 aa12.84□□□□□ -0.35
Sox2ot-215ENSMUST00000199171 Crybg2B7ZCC2 1516 aa12.81□□□□□ -0.36
Sox2ot-215ENSMUST00000199171 Smarca2Q6DIC0 1577 aa12.75□□□□□ -0.37
Sox2ot-215ENSMUST00000199171 Cep164Q5DU05 1446 aa12.74□□□□□ -0.37
Sox2ot-215ENSMUST00000199171 NefmP08553 848 aa12.65□□□□□ -0.38
Sox2ot-215ENSMUST00000199171 Brd4Q9ESU6 1400 aaKnown RBP12.62□□□□□ -0.39
Sox2ot-215ENSMUST00000199171 Las1lA2BE28 776 aaKnown RBP12.58□□□□□ -0.4
Sox2ot-215ENSMUST00000199171 Pds5bQ4VA53 1446 aaKnown RBP12.57□□□□□ -0.4
Sox2ot-215ENSMUST00000199171 Supt5hO55201 1082 aaKnown RBP12.56□□□□□ -0.4
Sox2ot-215ENSMUST00000199171 Gab3Q8BSM5 595 aa12.54□□□□□ -0.4
Sox2ot-215ENSMUST00000199171 Dnajc5bQ9CQ94 199 aa12.53□□□□□ -0.4
Sox2ot-215ENSMUST00000199171 Synj1Q8CHC4 1574 aa12.53□□□□□ -0.4
Sox2ot-215ENSMUST00000199171 Smarca4Q3TKT4 1613 aaKnown RBP12.53□□□□□ -0.4
Sox2ot-215ENSMUST00000199171 Atad2bE9Q166 1460 aaKnown RBP12.51□□□□□ -0.41
Sox2ot-215ENSMUST00000199171 Il27Q8K3I6 234 aa12.5□□□□□ -0.41
Sox2ot-215ENSMUST00000199171 CftrP26361 1476 aa12.5□□□□□ -0.41
Sox2ot-215ENSMUST00000199171 Zeb1Q64318 1117 aa12.49□□□□□ -0.41
Sox2ot-215ENSMUST00000199171 Iqgap2Q3UQ44 1575 aa12.45□□□□□ -0.42
Sox2ot-215ENSMUST00000199171 Chic1Q8CBW7 227 aa12.45□□□□□ -0.42
Sox2ot-215ENSMUST00000199171 Ercc6F8VPZ5 1481 aa12.41□□□□□ -0.42
Sox2ot-215ENSMUST00000199171 Ubl4bQ9CQ84 188 aa12.41□□□□□ -0.42
Sox2ot-215ENSMUST00000199171 Mier1Q5UAK0 511 aa12.35□□□□□ -0.43
Sox2ot-215ENSMUST00000199171 Rsf1E9PWW9 1441 aaKnown RBP12.35□□□□□ -0.43
Sox2ot-215ENSMUST00000199171 Golga3P55937 1487 aa12.33□□□□□ -0.44
Sox2ot-215ENSMUST00000199171 Cttnbp2B9EJA2 1648 aa12.33□□□□□ -0.44
Sox2ot-215ENSMUST00000199171 Neurod1Q60867 357 aa12.31□□□□□ -0.44
Sox2ot-215ENSMUST00000199171 Frmpd1A2AKB4 1549 aa12.31□□□□□ -0.44
Sox2ot-215ENSMUST00000199171 Ccdc88bQ4QRL3 1481 aa12.27□□□□□ -0.45
Sox2ot-215ENSMUST00000199171 Kif15Q6P9L6 1387 aa12.26□□□□□ -0.45
Sox2ot-215ENSMUST00000199171 Wdr66E9Q743 1299 aa12.26□□□□□ -0.45
Sox2ot-215ENSMUST00000199171 Npm2Q80W85 207 aa12.24□□□□□ -0.45
Sox2ot-215ENSMUST00000199171 Myt1lP97500 1187 aa12.23□□□□□ -0.45
Sox2ot-215ENSMUST00000199171 Wdr62Q3U3T8 1523 aa12.22□□□□□ -0.45
Sox2ot-215ENSMUST00000199171 Npm1Q61937 292 aaKnown RBP12.21□□□□□ -0.45
Sox2ot-215ENSMUST00000199171 UbtfP25976 765 aaKnown RBP12.2□□□□□ -0.46
Sox2ot-215ENSMUST00000199171 Phldb1Q6PDH0 1371 aaKnown RBP12.2□□□□□ -0.46
Sox2ot-215ENSMUST00000199171 Sall2Q9QX96 1004 aa12.19□□□□□ -0.46
Sox2ot-215ENSMUST00000199171 Cc2d2aQ8CFW7 1633 aa12.19□□□□□ -0.46
Sox2ot-215ENSMUST00000199171 Anks4bQ8K3X6 423 aa12.17□□□□□ -0.46
Sox2ot-215ENSMUST00000199171 Cdk11bP24788 784 aaKnown RBP12.14□□□□□ -0.47
Sox2ot-215ENSMUST00000199171 Thoc2B1AZI6 1594 aaKnown RBP12.13□□□□□ -0.47
Sox2ot-215ENSMUST00000199171 ClspnQ80YR7 1315 aa12.11□□□□□ -0.47
Sox2ot-215ENSMUST00000199171 Cux2P70298 1426 aa12.09□□□□□ -0.47
Sox2ot-215ENSMUST00000199171 Nop58Q6DFW4 536 aaKnown RBP12.08□□□□□ -0.48
Sox2ot-215ENSMUST00000199171 Myt1Q8CFC2 1127 aa12.06□□□□□ -0.48
Sox2ot-215ENSMUST00000199171 CenpbP27790 599 aa12.04□□□□□ -0.48
Sox2ot-215ENSMUST00000199171 TonslQ6NZL6 1363 aa12.04□□□□□ -0.48
Sox2ot-215ENSMUST00000199171 Fmn1Q05860 1466 aa12.04□□□□□ -0.48
Sox2ot-215ENSMUST00000199171 Top2bQ64511 1612 aa12.03□□□□□ -0.48
Sox2ot-215ENSMUST00000199171 Unc13aQ4KUS2 1712 aa11.96□□□□□ -0.49
Sox2ot-215ENSMUST00000199171 Ccdc18Q640L5 1455 aa11.96□□□□□ -0.49
Sox2ot-215ENSMUST00000199171 Rapgef2Q8CHG7 1496 aa11.96□□□□□ -0.5
Sox2ot-215ENSMUST00000199171 Aplp2Q06335 707 aa11.95□□□□□ -0.5
Sox2ot-215ENSMUST00000199171 Ap3b1Q9Z1T1 1105 aa11.95□□□□□ -0.5
Sox2ot-215ENSMUST00000199171 Fam135aQ6NS59 1506 aa11.95□□□□□ -0.5
Sox2ot-215ENSMUST00000199171 1700123L14RikQ3V2K7 440 aa11.94□□□□□ -0.5
Sox2ot-215ENSMUST00000199171 Csrnp3P59055 597 aa11.92□□□□□ -0.5
Sox2ot-215ENSMUST00000199171 Clip1Q922J3 1391 aa11.92□□□□□ -0.5
Sox2ot-215ENSMUST00000199171 Aebp2Q9Z248 504 aaKnown RBP11.92□□□□□ -0.5
Sox2ot-215ENSMUST00000199171 Cep162Q6ZQ06 1403 aa11.91□□□□□ -0.5
Sox2ot-215ENSMUST00000199171 Mrc2Q64449 1479 aa11.89□□□□□ -0.51
Sox2ot-215ENSMUST00000199171 Lamc3Q9R0B6 1581 aa11.89□□□□□ -0.51
Sox2ot-215ENSMUST00000199171 Tnnt3Q9QZ47 272 aa11.88□□□□□ -0.51
Sox2ot-215ENSMUST00000199171 LrpprcQ6PB66 1392 aaKnown RBP11.86□□□□□ -0.51
Sox2ot-215ENSMUST00000199171 Dhx29Q6PGC1 1365 aaKnown RBP11.86□□□□□ -0.51
Sox2ot-215ENSMUST00000199171 PtprkP35822 1457 aa11.84□□□□□ -0.51
Sox2ot-215ENSMUST00000199171 Stra8P70278 393 aa11.83□□□□□ -0.52
Sox2ot-215ENSMUST00000199171 Top2aQ01320 1528 aaKnown RBP11.83□□□□□ -0.52
Sox2ot-215ENSMUST00000199171 Plekhg3Q4VAC9 1341 aa11.83□□□□□ -0.52
Sox2ot-215ENSMUST00000199171 Camsap1A2AHC3 1581 aa11.82□□□□□ -0.52
Sox2ot-215ENSMUST00000199171 Ppargc1bQ8VHJ7 1014 aa11.78□□□□□ -0.52
Sox2ot-215ENSMUST00000199171 TnnQ80Z71 1560 aa11.78□□□□□ -0.52
Sox2ot-215ENSMUST00000199171 Grin2bQ01097 1482 aa11.75□□□□□ -0.53
Sox2ot-215ENSMUST00000199171 Duox2A2AQ99 1517 aa11.75□□□□□ -0.53
Sox2ot-215ENSMUST00000199171 Eea1Q8BL66 1411 aa11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 79.2 ms