RNA–Protein interactions for RNA: ENSMUST00000199032.1

Ube3c-204, Transcript of Ubiquitin-protein ligase E3C, mousemouse

TSL 1 (best) BASIC

Gene Ube3c, Length 3,171 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3c-204ENSMUST00000199032 NischQ80TM9 1593 aa16.48■□□□□ 0.23
Ube3c-204ENSMUST00000199032 Gm35339A0A140LHH9 1649 aa16.08■□□□□ 0.16
Ube3c-204ENSMUST00000199032 Abcc9P70170 1546 aa15.82■□□□□ 0.12
Ube3c-204ENSMUST00000199032 Abcc8B2RUS7 1588 aa15.75■□□□□ 0.11
Ube3c-204ENSMUST00000199032 Rhox8Q6VSS7 320 aa15.27■□□□□ 0.03
Ube3c-204ENSMUST00000199032 ScribQ80U72 1612 aa15.04■□□□□ -0
Ube3c-204ENSMUST00000199032 Kdm5dQ62240 1548 aa14.67□□□□□ -0.06
Ube3c-204ENSMUST00000199032 NacadQ5SWP3 1504 aa14.52□□□□□ -0.09
Ube3c-204ENSMUST00000199032 Rb1cc1Q9ESK9 1588 aa14.4□□□□□ -0.1
Ube3c-204ENSMUST00000199032 Ccdc136Q3TVA9 1136 aa14.3□□□□□ -0.12
Ube3c-204ENSMUST00000199032 Zcchc6Q5BLK4 1491 aaKnown RBP14.26□□□□□ -0.13
Ube3c-204ENSMUST00000199032 Dcaf1Q80TR8 1506 aa14.25□□□□□ -0.13
Ube3c-204ENSMUST00000199032 Sycp2Q9CUU3 1500 aa14.25□□□□□ -0.13
Ube3c-204ENSMUST00000199032 Baz1aO88379 1555 aa14.1□□□□□ -0.15
Ube3c-204ENSMUST00000199032 BicraF8VPZ9 1578 aa14.08□□□□□ -0.16
Ube3c-204ENSMUST00000199032 Cecr2E9Q2Z1 1453 aa13.88□□□□□ -0.19
Ube3c-204ENSMUST00000199032 Dnajc5bQ9CQ94 199 aa13.82□□□□□ -0.2
Ube3c-204ENSMUST00000199032 Esf1Q3V1V3 845 aaKnown RBP13.73□□□□□ -0.21
Ube3c-204ENSMUST00000199032 Smarca2Q6DIC0 1577 aa13.7□□□□□ -0.22
Ube3c-204ENSMUST00000199032 Crybg2B7ZCC2 1516 aa13.7□□□□□ -0.22
Ube3c-204ENSMUST00000199032 Cngb1E1AZ71 1325 aa13.66□□□□□ -0.22
Ube3c-204ENSMUST00000199032 Rtl1Q7M732 1744 aa13.62□□□□□ -0.23
Ube3c-204ENSMUST00000199032 Ccdc180J3QNE4 1664 aa13.61□□□□□ -0.23
Ube3c-204ENSMUST00000199032 Trim41Q5NCC3 630 aa13.6□□□□□ -0.23
Ube3c-204ENSMUST00000199032 Pds5bQ4VA53 1446 aaKnown RBP13.53□□□□□ -0.24
Ube3c-204ENSMUST00000199032 Synj1Q8CHC4 1574 aa13.49□□□□□ -0.25
Ube3c-204ENSMUST00000199032 Smarca4Q3TKT4 1613 aaKnown RBP13.49□□□□□ -0.25
Ube3c-204ENSMUST00000199032 Atad2bE9Q166 1460 aaKnown RBP13.49□□□□□ -0.25
Ube3c-204ENSMUST00000199032 Iqgap2Q3UQ44 1575 aa13.45□□□□□ -0.26
Ube3c-204ENSMUST00000199032 Brd4Q9ESU6 1400 aaKnown RBP13.44□□□□□ -0.26
Ube3c-204ENSMUST00000199032 CftrP26361 1476 aa13.44□□□□□ -0.26
Ube3c-204ENSMUST00000199032 Il27Q8K3I6 234 aa13.4□□□□□ -0.26
Ube3c-204ENSMUST00000199032 Ubl4bQ9CQ84 188 aa13.36□□□□□ -0.27
Ube3c-204ENSMUST00000199032 Ercc6F8VPZ5 1481 aa13.34□□□□□ -0.27
Ube3c-204ENSMUST00000199032 Frmpd1A2AKB4 1549 aa13.33□□□□□ -0.28
Ube3c-204ENSMUST00000199032 Gab3Q8BSM5 595 aa13.31□□□□□ -0.28
Ube3c-204ENSMUST00000199032 Chic1Q8CBW7 227 aa13.31□□□□□ -0.28
Ube3c-204ENSMUST00000199032 Cc2d2aQ8CFW7 1633 aa13.26□□□□□ -0.29
Ube3c-204ENSMUST00000199032 Cttnbp2B9EJA2 1648 aa13.23□□□□□ -0.29
Ube3c-204ENSMUST00000199032 Wdr62Q3U3T8 1523 aa13.22□□□□□ -0.29
Ube3c-204ENSMUST00000199032 Thoc2B1AZI6 1594 aaKnown RBP13.22□□□□□ -0.29
Ube3c-204ENSMUST00000199032 Kif15Q6P9L6 1387 aa13.16□□□□□ -0.3
Ube3c-204ENSMUST00000199032 Rsf1E9PWW9 1441 aaKnown RBP13.16□□□□□ -0.3
Ube3c-204ENSMUST00000199032 Golga3P55937 1487 aa13.14□□□□□ -0.31
Ube3c-204ENSMUST00000199032 Ccdc88bQ4QRL3 1481 aa13.14□□□□□ -0.31
Ube3c-204ENSMUST00000199032 Phldb1Q6PDH0 1371 aaKnown RBP13.14□□□□□ -0.31
Ube3c-204ENSMUST00000199032 Npm1Q61937 292 aaKnown RBP13.05□□□□□ -0.32
Ube3c-204ENSMUST00000199032 Cux2P70298 1426 aa13.02□□□□□ -0.32
Ube3c-204ENSMUST00000199032 Unc13aQ4KUS2 1712 aa13.02□□□□□ -0.32
Ube3c-204ENSMUST00000199032 Ehmt2Q9Z148 1263 aaKnown RBP13□□□□□ -0.33
Ube3c-204ENSMUST00000199032 Myt1lP97500 1187 aa12.97□□□□□ -0.33
Ube3c-204ENSMUST00000199032 Fam135aQ6NS59 1506 aa12.96□□□□□ -0.33
Ube3c-204ENSMUST00000199032 Npm2Q80W85 207 aa12.96□□□□□ -0.33
Ube3c-204ENSMUST00000199032 Zeb1Q64318 1117 aa12.94□□□□□ -0.34
Ube3c-204ENSMUST00000199032 HrcG5E8J6 738 aa12.91□□□□□ -0.34
Ube3c-204ENSMUST00000199032 Top2bQ64511 1612 aa12.91□□□□□ -0.34
Ube3c-204ENSMUST00000199032 Mrc2Q64449 1479 aa12.85□□□□□ -0.35
Ube3c-204ENSMUST00000199032 Fmn1Q05860 1466 aa12.84□□□□□ -0.35
Ube3c-204ENSMUST00000199032 Lamc3Q9R0B6 1581 aa12.8□□□□□ -0.36
Ube3c-204ENSMUST00000199032 Ccdc18Q640L5 1455 aa12.77□□□□□ -0.36
Ube3c-204ENSMUST00000199032 Cep164Q5DU05 1446 aa12.76□□□□□ -0.37
Ube3c-204ENSMUST00000199032 Dhx29Q6PGC1 1365 aaKnown RBP12.76□□□□□ -0.37
Ube3c-204ENSMUST00000199032 PtprkP35822 1457 aa12.75□□□□□ -0.37
Ube3c-204ENSMUST00000199032 LrpprcQ6PB66 1392 aaKnown RBP12.73□□□□□ -0.37
Ube3c-204ENSMUST00000199032 Ap3b1Q9Z1T1 1105 aa12.73□□□□□ -0.37
Ube3c-204ENSMUST00000199032 Camsap1A2AHC3 1581 aa12.71□□□□□ -0.37
Ube3c-204ENSMUST00000199032 Kif21aQ9QXL2 1672 aa12.71□□□□□ -0.37
Ube3c-204ENSMUST00000199032 TnnQ80Z71 1560 aa12.68□□□□□ -0.38
Ube3c-204ENSMUST00000199032 Plb1Q3TTY0 1478 aa12.67□□□□□ -0.38
Ube3c-204ENSMUST00000199032 Rapgef2Q8CHG7 1496 aa12.66□□□□□ -0.38
Ube3c-204ENSMUST00000199032 Top2aQ01320 1528 aaKnown RBP12.66□□□□□ -0.38
Ube3c-204ENSMUST00000199032 Rad54l2Q99NG0 1466 aa12.65□□□□□ -0.38
Ube3c-204ENSMUST00000199032 Urb2E9Q7L1 1524 aaKnown RBP12.64□□□□□ -0.39
Ube3c-204ENSMUST00000199032 Duox2A2AQ99 1517 aa12.63□□□□□ -0.39
Ube3c-204ENSMUST00000199032 Grin2bQ01097 1482 aa12.62□□□□□ -0.39
Ube3c-204ENSMUST00000199032 PogzQ8BZH4 1409 aaKnown RBP12.6□□□□□ -0.39
Ube3c-204ENSMUST00000199032 Baz1bQ9Z277 1479 aa12.57□□□□□ -0.4
Ube3c-204ENSMUST00000199032 Lrriq1Q0P5X1 1673 aa12.55□□□□□ -0.4
Ube3c-204ENSMUST00000199032 Pelp1Q9DBD5 1123 aaKnown RBP12.54□□□□□ -0.4
Ube3c-204ENSMUST00000199032 Fkbp15Q6P9Q6 1216 aaKnown RBP12.53□□□□□ -0.4
Ube3c-204ENSMUST00000199032 Crocc2F6XLV1 1638 aa12.52□□□□□ -0.4
Ube3c-204ENSMUST00000199032 Samd9lQ69Z37 1561 aa12.52□□□□□ -0.41
Ube3c-204ENSMUST00000199032 Ifnlr1Q8CGK5 535 aa12.51□□□□□ -0.41
Ube3c-204ENSMUST00000199032 Cep162Q6ZQ06 1403 aa12.51□□□□□ -0.41
Ube3c-204ENSMUST00000199032 Shroom4Q1W617 1475 aa12.5□□□□□ -0.41
Ube3c-204ENSMUST00000199032 Plekhg3Q4VAC9 1341 aa12.49□□□□□ -0.41
Ube3c-204ENSMUST00000199032 Lmod2Q3UHZ5 550 aa12.48□□□□□ -0.41
Ube3c-204ENSMUST00000199032 Arhgap27A2AB59 869 aa12.46□□□□□ -0.41
Ube3c-204ENSMUST00000199032 Efcab5A0JP43 1406 aa12.45□□□□□ -0.42
Ube3c-204ENSMUST00000199032 Arhgap35Q91YM2 1499 aa12.45□□□□□ -0.42
Ube3c-204ENSMUST00000199032 NrkQ9R0G8 1455 aa12.44□□□□□ -0.42
Ube3c-204ENSMUST00000199032 Disp1Q3TDN0 1521 aa12.43□□□□□ -0.42
Ube3c-204ENSMUST00000199032 UbtfP25976 765 aaKnown RBP12.4□□□□□ -0.42
Ube3c-204ENSMUST00000199032 Clip1Q922J3 1391 aa12.38□□□□□ -0.43
Ube3c-204ENSMUST00000199032 Grin2aP35436 1464 aa12.37□□□□□ -0.43
Ube3c-204ENSMUST00000199032 Mroh2bQ7M6Y6 1581 aa12.37□□□□□ -0.43
Ube3c-204ENSMUST00000199032 AknaQ80VW7 1404 aa12.36□□□□□ -0.43
Ube3c-204ENSMUST00000199032 Rpap1Q80TE0 1409 aa12.36□□□□□ -0.43
Ube3c-204ENSMUST00000199032 Magi3Q9EQJ9 1476 aa12.34□□□□□ -0.43
Ube3c-204ENSMUST00000199032 Setd5Q5XJV7 1441 aa12.34□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms