RNA–Protein interactions for RNA: ENSMUST00000198019.1

Trav7-1-201, Transcript of T cell receptor alpha variable 7-1 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav7-1, Length 337 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1-201ENSMUST00000198019 Chic1Q8CBW7 227 aa17.12■□□□□ 0.33
Trav7-1-201ENSMUST00000198019 Mapk8ip2Q9ERE9 830 aa16.03■□□□□ 0.16
Trav7-1-201ENSMUST00000198019 Plppr3Q7TPB0 716 aa15.35■□□□□ 0.05
Trav7-1-201ENSMUST00000198019 Phf23Q8BSN5 401 aa15.35■□□□□ 0.05
Trav7-1-201ENSMUST00000198019 Gab3Q8BSM5 595 aa14.96□□□□□ -0.01
Trav7-1-201ENSMUST00000198019 NischQ80TM9 1593 aa14.62□□□□□ -0.07
Trav7-1-201ENSMUST00000198019 Gm35339A0A140LHH9 1649 aa14.48□□□□□ -0.09
Trav7-1-201ENSMUST00000198019 Kcna4Q61423 654 aa14.35□□□□□ -0.11
Trav7-1-201ENSMUST00000198019 Senp3Q9EP97 568 aaKnown RBP14.3□□□□□ -0.12
Trav7-1-201ENSMUST00000198019 Abcc9P70170 1546 aa14.15□□□□□ -0.14
Trav7-1-201ENSMUST00000198019 Abcc8B2RUS7 1588 aa13.93□□□□□ -0.18
Trav7-1-201ENSMUST00000198019 Rhox8Q6VSS7 320 aa13.35□□□□□ -0.27
Trav7-1-201ENSMUST00000198019 ScribQ80U72 1612 aa13.06□□□□□ -0.32
Trav7-1-201ENSMUST00000198019 Ppargc1bQ8VHJ7 1014 aa13.04□□□□□ -0.32
Trav7-1-201ENSMUST00000198019 Dcaf1Q80TR8 1506 aa13.02□□□□□ -0.33
Trav7-1-201ENSMUST00000198019 NacadQ5SWP3 1504 aa12.87□□□□□ -0.35
Trav7-1-201ENSMUST00000198019 Dmrt2Q8BG36 561 aa12.85□□□□□ -0.35
Trav7-1-201ENSMUST00000198019 Rtl1Q7M732 1744 aa12.85□□□□□ -0.35
Trav7-1-201ENSMUST00000198019 Kdm5dQ62240 1548 aa12.84□□□□□ -0.35
Trav7-1-201ENSMUST00000198019 Rb1cc1Q9ESK9 1588 aa12.8□□□□□ -0.36
Trav7-1-201ENSMUST00000198019 Trap1aP19473 224 aa12.78□□□□□ -0.36
Trav7-1-201ENSMUST00000198019 Ube2uB1AUC4 352 aa12.76□□□□□ -0.37
Trav7-1-201ENSMUST00000198019 Slc4a1apE9PX68 744 aa12.68□□□□□ -0.38
Trav7-1-201ENSMUST00000198019 Ccdc180J3QNE4 1664 aa12.66□□□□□ -0.38
Trav7-1-201ENSMUST00000198019 Baz1aO88379 1555 aa12.64□□□□□ -0.39
Trav7-1-201ENSMUST00000198019 Sycp2Q9CUU3 1500 aa12.55□□□□□ -0.4
Trav7-1-201ENSMUST00000198019 Crybg2B7ZCC2 1516 aa12.52□□□□□ -0.41
Trav7-1-201ENSMUST00000198019 Zcchc6Q5BLK4 1491 aaKnown RBP12.46□□□□□ -0.42
Trav7-1-201ENSMUST00000198019 Hoxd11P23813 323 aa12.43□□□□□ -0.42
Trav7-1-201ENSMUST00000198019 Ccdc136Q3TVA9 1136 aa12.33□□□□□ -0.44
Trav7-1-201ENSMUST00000198019 Smarca2Q6DIC0 1577 aa12.29□□□□□ -0.44
Trav7-1-201ENSMUST00000198019 Trim41Q5NCC3 630 aa12.24□□□□□ -0.45
Trav7-1-201ENSMUST00000198019 BicraF8VPZ9 1578 aa12.21□□□□□ -0.46
Trav7-1-201ENSMUST00000198019 Brd4Q9ESU6 1400 aaKnown RBP12.11□□□□□ -0.47
Trav7-1-201ENSMUST00000198019 Cecr2E9Q2Z1 1453 aa12.02□□□□□ -0.48
Trav7-1-201ENSMUST00000198019 Chrna2Q91X60 512 aa12.01□□□□□ -0.49
Trav7-1-201ENSMUST00000198019 Fam71e1A1L3C1 212 aa12□□□□□ -0.49
Trav7-1-201ENSMUST00000198019 HrcG5E8J6 738 aa12□□□□□ -0.49
Trav7-1-201ENSMUST00000198019 Smarca4Q3TKT4 1613 aaKnown RBP11.97□□□□□ -0.49
Trav7-1-201ENSMUST00000198019 Ppp4r2Q0VGB7 417 aa11.97□□□□□ -0.49
Trav7-1-201ENSMUST00000198019 Atf5O70191 283 aa11.95□□□□□ -0.5
Trav7-1-201ENSMUST00000198019 Pds5bQ4VA53 1446 aaKnown RBP11.94□□□□□ -0.5
Trav7-1-201ENSMUST00000198019 Esf1Q3V1V3 845 aaKnown RBP11.94□□□□□ -0.5
Trav7-1-201ENSMUST00000198019 Dnajc5bQ9CQ94 199 aa11.94□□□□□ -0.5
Trav7-1-201ENSMUST00000198019 Hs6st3Q9QYK4 470 aa11.93□□□□□ -0.5
Trav7-1-201ENSMUST00000198019 Znf219Q6IQX8 726 aa11.92□□□□□ -0.5
Trav7-1-201ENSMUST00000198019 Cngb1E1AZ71 1325 aa11.9□□□□□ -0.5
Trav7-1-201ENSMUST00000198019 Synj1Q8CHC4 1574 aa11.9□□□□□ -0.5
Trav7-1-201ENSMUST00000198019 CftrP26361 1476 aa11.89□□□□□ -0.51
Trav7-1-201ENSMUST00000198019 Cttnbp2B9EJA2 1648 aa11.89□□□□□ -0.51
Trav7-1-201ENSMUST00000198019 Atad2bE9Q166 1460 aaKnown RBP11.89□□□□□ -0.51
Trav7-1-201ENSMUST00000198019 1700123L14RikQ3V2K7 440 aa11.86□□□□□ -0.51
Trav7-1-201ENSMUST00000198019 Rsph4aQ8BYM7 716 aa11.86□□□□□ -0.51
Trav7-1-201ENSMUST00000198019 Iqgap2Q3UQ44 1575 aa11.83□□□□□ -0.52
Trav7-1-201ENSMUST00000198019 Golga3P55937 1487 aa11.82□□□□□ -0.52
Trav7-1-201ENSMUST00000198019 Ercc6F8VPZ5 1481 aa11.76□□□□□ -0.53
Trav7-1-201ENSMUST00000198019 Cep164Q5DU05 1446 aa11.71□□□□□ -0.53
Trav7-1-201ENSMUST00000198019 Fam163aQ8CAA5 168 aa11.71□□□□□ -0.53
Trav7-1-201ENSMUST00000198019 AcrbpQ3V140 540 aa11.68□□□□□ -0.54
Trav7-1-201ENSMUST00000198019 Nlrp6Q91WS2 869 aa11.66□□□□□ -0.54
Trav7-1-201ENSMUST00000198019 Top2bQ64511 1612 aa11.64□□□□□ -0.55
Trav7-1-201ENSMUST00000198019 Ehmt2Q9Z148 1263 aaKnown RBP11.63□□□□□ -0.55
Trav7-1-201ENSMUST00000198019 Wdr62Q3U3T8 1523 aa11.62□□□□□ -0.55
Trav7-1-201ENSMUST00000198019 Rimbp2Q80U40 1072 aa11.61□□□□□ -0.55
Trav7-1-201ENSMUST00000198019 Frmpd1A2AKB4 1549 aa11.6□□□□□ -0.55
Trav7-1-201ENSMUST00000198019 Rsf1E9PWW9 1441 aaKnown RBP11.6□□□□□ -0.55
Trav7-1-201ENSMUST00000198019 Fmn1Q05860 1466 aa11.59□□□□□ -0.55
Trav7-1-201ENSMUST00000198019 Ccdc88bQ4QRL3 1481 aa11.56□□□□□ -0.56
Trav7-1-201ENSMUST00000198019 Cc2d2aQ8CFW7 1633 aa11.53□□□□□ -0.56
Trav7-1-201ENSMUST00000198019 Cdca7Q9D0M2 382 aa11.52□□□□□ -0.57
Trav7-1-201ENSMUST00000198019 Phldb1Q6PDH0 1371 aaKnown RBP11.52□□□□□ -0.57
Trav7-1-201ENSMUST00000198019 Thoc2B1AZI6 1594 aaKnown RBP11.51□□□□□ -0.57
Trav7-1-201ENSMUST00000198019 Pde4cQ3UEI1 686 aa11.5□□□□□ -0.57
Trav7-1-201ENSMUST00000198019 Kif15Q6P9L6 1387 aa11.48□□□□□ -0.57
Trav7-1-201ENSMUST00000198019 Rtn4Q99P72 1162 aaKnown RBP11.46□□□□□ -0.57
Trav7-1-201ENSMUST00000198019 Ubl4bQ9CQ84 188 aa11.45□□□□□ -0.58
Trav7-1-201ENSMUST00000198019 Lamc3Q9R0B6 1581 aa11.42□□□□□ -0.58
Trav7-1-201ENSMUST00000198019 Top2aQ01320 1528 aaKnown RBP11.41□□□□□ -0.58
Trav7-1-201ENSMUST00000198019 TnnQ80Z71 1560 aa11.41□□□□□ -0.58
Trav7-1-201ENSMUST00000198019 Fam135aQ6NS59 1506 aa11.4□□□□□ -0.58
Trav7-1-201ENSMUST00000198019 Npm2Q80W85 207 aa11.39□□□□□ -0.59
Trav7-1-201ENSMUST00000198019 Ccdc18Q640L5 1455 aa11.38□□□□□ -0.59
Trav7-1-201ENSMUST00000198019 Prm3Q62100 101 aa11.38□□□□□ -0.59
Trav7-1-201ENSMUST00000198019 Il27Q8K3I6 234 aa11.38□□□□□ -0.59
Trav7-1-201ENSMUST00000198019 Baz1bQ9Z277 1479 aa11.37□□□□□ -0.59
Trav7-1-201ENSMUST00000198019 Unc13aQ4KUS2 1712 aa11.36□□□□□ -0.59
Trav7-1-201ENSMUST00000198019 Npm1Q61937 292 aaKnown RBP11.36□□□□□ -0.59
Trav7-1-201ENSMUST00000198019 Cux2P70298 1426 aa11.32□□□□□ -0.6
Trav7-1-201ENSMUST00000198019 Rapgef2Q8CHG7 1496 aa11.29□□□□□ -0.6
Trav7-1-201ENSMUST00000198019 Camsap1A2AHC3 1581 aa11.28□□□□□ -0.6
Trav7-1-201ENSMUST00000198019 Bach1P97302 739 aa11.27□□□□□ -0.61
Trav7-1-201ENSMUST00000198019 Rpgrip1Q9EPQ2 1331 aa11.26□□□□□ -0.61
Trav7-1-201ENSMUST00000198019 Myt1lP97500 1187 aa11.25□□□□□ -0.61
Trav7-1-201ENSMUST00000198019 Zeb1Q64318 1117 aa11.24□□□□□ -0.61
Trav7-1-201ENSMUST00000198019 Tshz2Q68FE9 1030 aa11.23□□□□□ -0.61
Trav7-1-201ENSMUST00000198019 Cep162Q6ZQ06 1403 aa11.22□□□□□ -0.61
Trav7-1-201ENSMUST00000198019 NrkQ9R0G8 1455 aa11.22□□□□□ -0.61
Trav7-1-201ENSMUST00000198019 Akt1s1Q9D1F4 257 aa11.21□□□□□ -0.61
Trav7-1-201ENSMUST00000198019 Grin2bQ01097 1482 aa11.2□□□□□ -0.62
Trav7-1-201ENSMUST00000198019 Mrc2Q64449 1479 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 36.3 ms