RNA–Protein interactions for RNA: ENSMUST00000197977.4

Sox2ot-211, mousemouse

TSL 1 (best) BASIC

Gene Sox2ot, Length 2,970 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2ot-211ENSMUST00000197977 Gm35339A0A140LHH9 1649 aa22.46■■□□□ 1.19
Sox2ot-211ENSMUST00000197977 NischQ80TM9 1593 aa21.44■■□□□ 1.02
Sox2ot-211ENSMUST00000197977 Abcc8B2RUS7 1588 aa20.95■□□□□ 0.94
Sox2ot-211ENSMUST00000197977 Abcc9P70170 1546 aa20.94■□□□□ 0.94
Sox2ot-211ENSMUST00000197977 ScribQ80U72 1612 aa20.29■□□□□ 0.84
Sox2ot-211ENSMUST00000197977 NacadQ5SWP3 1504 aa19.66■□□□□ 0.74
Sox2ot-211ENSMUST00000197977 Dcaf1Q80TR8 1506 aa19.61■□□□□ 0.73
Sox2ot-211ENSMUST00000197977 Kdm5dQ62240 1548 aa19.47■□□□□ 0.71
Sox2ot-211ENSMUST00000197977 Sycp2Q9CUU3 1500 aa19.29■□□□□ 0.68
Sox2ot-211ENSMUST00000197977 Ccdc180J3QNE4 1664 aa19.11■□□□□ 0.65
Sox2ot-211ENSMUST00000197977 BicraF8VPZ9 1578 aa19.01■□□□□ 0.63
Sox2ot-211ENSMUST00000197977 Crybg2B7ZCC2 1516 aa18.86■□□□□ 0.61
Sox2ot-211ENSMUST00000197977 Rb1cc1Q9ESK9 1588 aa18.64■□□□□ 0.57
Sox2ot-211ENSMUST00000197977 Thoc2B1AZI6 1594 aaKnown RBP18.59■□□□□ 0.57
Sox2ot-211ENSMUST00000197977 Baz1aO88379 1555 aa18.52■□□□□ 0.56
Sox2ot-211ENSMUST00000197977 Pds5bQ4VA53 1446 aaKnown RBP18.49■□□□□ 0.55
Sox2ot-211ENSMUST00000197977 Baz1bQ9Z277 1479 aa18.43■□□□□ 0.54
Sox2ot-211ENSMUST00000197977 Atad2bE9Q166 1460 aaKnown RBP18.3■□□□□ 0.52
Sox2ot-211ENSMUST00000197977 Smarca2Q6DIC0 1577 aa18.21■□□□□ 0.51
Sox2ot-211ENSMUST00000197977 Fam135aQ6NS59 1506 aa18.15■□□□□ 0.5
Sox2ot-211ENSMUST00000197977 Smarca4Q3TKT4 1613 aaKnown RBP18.07■□□□□ 0.48
Sox2ot-211ENSMUST00000197977 Dnajc5bQ9CQ94 199 aa18.07■□□□□ 0.48
Sox2ot-211ENSMUST00000197977 Cc2d2aQ8CFW7 1633 aa17.97■□□□□ 0.47
Sox2ot-211ENSMUST00000197977 Ercc6F8VPZ5 1481 aa17.94■□□□□ 0.46
Sox2ot-211ENSMUST00000197977 Iqgap2Q3UQ44 1575 aa17.92■□□□□ 0.46
Sox2ot-211ENSMUST00000197977 Wdr62Q3U3T8 1523 aa17.9■□□□□ 0.46
Sox2ot-211ENSMUST00000197977 Frmpd1A2AKB4 1549 aa17.74■□□□□ 0.43
Sox2ot-211ENSMUST00000197977 Zcchc6Q5BLK4 1491 aaKnown RBP17.71■□□□□ 0.43
Sox2ot-211ENSMUST00000197977 Phldb1Q6PDH0 1371 aaKnown RBP17.68■□□□□ 0.42
Sox2ot-211ENSMUST00000197977 Unc13aQ4KUS2 1712 aa17.68■□□□□ 0.42
Sox2ot-211ENSMUST00000197977 Cecr2E9Q2Z1 1453 aa17.65■□□□□ 0.42
Sox2ot-211ENSMUST00000197977 Rtl1Q7M732 1744 aa17.59■□□□□ 0.41
Sox2ot-211ENSMUST00000197977 Cttnbp2B9EJA2 1648 aa17.56■□□□□ 0.4
Sox2ot-211ENSMUST00000197977 Mrc2Q64449 1479 aa17.43■□□□□ 0.38
Sox2ot-211ENSMUST00000197977 CftrP26361 1476 aa17.39■□□□□ 0.37
Sox2ot-211ENSMUST00000197977 Rhox8Q6VSS7 320 aa17.28■□□□□ 0.36
Sox2ot-211ENSMUST00000197977 Synj1Q8CHC4 1574 aa17.28■□□□□ 0.36
Sox2ot-211ENSMUST00000197977 Brd4Q9ESU6 1400 aaKnown RBP17.27■□□□□ 0.36
Sox2ot-211ENSMUST00000197977 Lamc3Q9R0B6 1581 aa17.15■□□□□ 0.34
Sox2ot-211ENSMUST00000197977 Lrriq1Q0P5X1 1673 aa17.1■□□□□ 0.33
Sox2ot-211ENSMUST00000197977 Ubl4bQ9CQ84 188 aa17.06■□□□□ 0.32
Sox2ot-211ENSMUST00000197977 Rsf1E9PWW9 1441 aaKnown RBP17.05■□□□□ 0.32
Sox2ot-211ENSMUST00000197977 Eif4g3Q80XI3 1579 aaKnown RBP17.03■□□□□ 0.32
Sox2ot-211ENSMUST00000197977 TnnQ80Z71 1560 aa17■□□□□ 0.31
Sox2ot-211ENSMUST00000197977 Shroom2A2ALU4 1481 aa16.96■□□□□ 0.31
Sox2ot-211ENSMUST00000197977 Kif21aQ9QXL2 1672 aa16.95■□□□□ 0.3
Sox2ot-211ENSMUST00000197977 Dnajc5P60904 198 aa16.87■□□□□ 0.29
Sox2ot-211ENSMUST00000197977 Top2bQ64511 1612 aa16.84■□□□□ 0.29
Sox2ot-211ENSMUST00000197977 Cux2P70298 1426 aa16.84■□□□□ 0.29
Sox2ot-211ENSMUST00000197977 Gpatch8A2A6A1 1505 aa16.8■□□□□ 0.28
Sox2ot-211ENSMUST00000197977 Kif15Q6P9L6 1387 aa16.71■□□□□ 0.27
Sox2ot-211ENSMUST00000197977 Pbrm1Q8BSQ9 1634 aaKnown RBP16.69■□□□□ 0.26
Sox2ot-211ENSMUST00000197977 Cep164Q5DU05 1446 aa16.69■□□□□ 0.26
Sox2ot-211ENSMUST00000197977 Camsap1A2AHC3 1581 aa16.66■□□□□ 0.26
Sox2ot-211ENSMUST00000197977 Zcchc11B2RX14 1644 aaKnown RBP16.65■□□□□ 0.26
Sox2ot-211ENSMUST00000197977 Urb2E9Q7L1 1524 aaKnown RBP16.64■□□□□ 0.25
Sox2ot-211ENSMUST00000197977 Crocc2F6XLV1 1638 aa16.61■□□□□ 0.25
Sox2ot-211ENSMUST00000197977 Rusc2Q80U22 1514 aa16.6■□□□□ 0.25
Sox2ot-211ENSMUST00000197977 Ift140E9PY46 1464 aa16.6■□□□□ 0.25
Sox2ot-211ENSMUST00000197977 Ccdc18Q640L5 1455 aa16.57■□□□□ 0.24
Sox2ot-211ENSMUST00000197977 Col17a1Q07563 1470 aa16.57■□□□□ 0.24
Sox2ot-211ENSMUST00000197977 Golga3P55937 1487 aa16.55■□□□□ 0.24
Sox2ot-211ENSMUST00000197977 Trim41Q5NCC3 630 aa16.52■□□□□ 0.24
Sox2ot-211ENSMUST00000197977 Rpgrip1Q9EPQ2 1331 aa16.52■□□□□ 0.24
Sox2ot-211ENSMUST00000197977 PogzQ8BZH4 1409 aaKnown RBP16.51■□□□□ 0.23
Sox2ot-211ENSMUST00000197977 Fmn1Q05860 1466 aa16.51■□□□□ 0.23
Sox2ot-211ENSMUST00000197977 LrpprcQ6PB66 1392 aaKnown RBP16.5■□□□□ 0.23
Sox2ot-211ENSMUST00000197977 Dhx29Q6PGC1 1365 aaKnown RBP16.49■□□□□ 0.23
Sox2ot-211ENSMUST00000197977 Plb1Q3TTY0 1478 aa16.49■□□□□ 0.23
Sox2ot-211ENSMUST00000197977 Nup160Q9Z0W3 1402 aaKnown RBP16.42■□□□□ 0.22
Sox2ot-211ENSMUST00000197977 Npm1Q61937 292 aaKnown RBP16.39■□□□□ 0.21
Sox2ot-211ENSMUST00000197977 Setd1bQ8CFT2 1985 aa16.37■□□□□ 0.21
Sox2ot-211ENSMUST00000197977 Grin2bQ01097 1482 aa16.36■□□□□ 0.21
Sox2ot-211ENSMUST00000197977 Cc2d2bA0A286YDU8 1405 aa16.35■□□□□ 0.21
Sox2ot-211ENSMUST00000197977 Disp1Q3TDN0 1521 aa16.34■□□□□ 0.21
Sox2ot-211ENSMUST00000197977 Efcab5A0JP43 1406 aa16.33■□□□□ 0.2
Sox2ot-211ENSMUST00000197977 Duox2A2AQ99 1517 aa16.32■□□□□ 0.2
Sox2ot-211ENSMUST00000197977 Esf1Q3V1V3 845 aaKnown RBP16.29■□□□□ 0.2
Sox2ot-211ENSMUST00000197977 NrkQ9R0G8 1455 aa16.27■□□□□ 0.2
Sox2ot-211ENSMUST00000197977 Samd9lQ69Z37 1561 aa16.24■□□□□ 0.19
Sox2ot-211ENSMUST00000197977 AqrQ8CFQ3 1481 aaKnown RBP16.23■□□□□ 0.19
Sox2ot-211ENSMUST00000197977 Ccdc136Q3TVA9 1136 aa16.22■□□□□ 0.19
Sox2ot-211ENSMUST00000197977 Top2aQ01320 1528 aaKnown RBP16.19■□□□□ 0.18
Sox2ot-211ENSMUST00000197977 Pabpn1Q8CCS6 302 aaKnown RBP16.19■□□□□ 0.18
Sox2ot-211ENSMUST00000197977 Magi3Q9EQJ9 1476 aa16.17■□□□□ 0.18
Sox2ot-211ENSMUST00000197977 Grin2aP35436 1464 aa16.09■□□□□ 0.17
Sox2ot-211ENSMUST00000197977 Arhgef5E9Q7D5 1581 aa16.08■□□□□ 0.17
Sox2ot-211ENSMUST00000197977 SynmQ70IV5 1561 aa16.06■□□□□ 0.16
Sox2ot-211ENSMUST00000197977 Cep170Q6A065 1588 aa16.06■□□□□ 0.16
Sox2ot-211ENSMUST00000197977 Shroom4Q1W617 1475 aa16.06■□□□□ 0.16
Sox2ot-211ENSMUST00000197977 Fgd6Q69ZL1 1399 aa16.05■□□□□ 0.16
Sox2ot-211ENSMUST00000197977 Adgrl3Q80TS3 1537 aa16.05■□□□□ 0.16
Sox2ot-211ENSMUST00000197977 Dnmt1P13864 1620 aaKnown RBP16.04■□□□□ 0.16
Sox2ot-211ENSMUST00000197977 Map3k4O08648 1597 aa16.04■□□□□ 0.16
Sox2ot-211ENSMUST00000197977 EprsQ8CGC7 1512 aaKnown RBP16.03■□□□□ 0.16
Sox2ot-211ENSMUST00000197977 Adamts12Q811B3 1600 aa16.03■□□□□ 0.16
Sox2ot-211ENSMUST00000197977 Chd1P40201 1711 aa16.02■□□□□ 0.15
Sox2ot-211ENSMUST00000197977 Pla2r1Q62028 1487 aa16.01■□□□□ 0.15
Sox2ot-211ENSMUST00000197977 Arhgef12Q8R4H2 1543 aaKnown RBP15.98■□□□□ 0.15
Sox2ot-211ENSMUST00000197977 Setbp1Q9Z180 1582 aa15.97■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 113.4 ms