RNA–Protein interactions for RNA: ENSMUST00000194677.5

Lamb3-209, Transcript of Laminin subunit beta-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lamb3, Length 4,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lamb3-209ENSMUST00000194677 Rhox8Q6VSS7 320 aa20.82■□□□□ 0.92
Lamb3-209ENSMUST00000194677 Rpgrip1Q9EPQ2 1331 aa19.96■□□□□ 0.79
Lamb3-209ENSMUST00000194677 NischQ80TM9 1593 aa19.76■□□□□ 0.75
Lamb3-209ENSMUST00000194677 Rtl1Q7M732 1744 aa18.98■□□□□ 0.63
Lamb3-209ENSMUST00000194677 Ccdc180J3QNE4 1664 aa18.92■□□□□ 0.62
Lamb3-209ENSMUST00000194677 Abcc9P70170 1546 aa18.77■□□□□ 0.59
Lamb3-209ENSMUST00000194677 Ehmt2Q9Z148 1263 aaKnown RBP18.72■□□□□ 0.59
Lamb3-209ENSMUST00000194677 Ccdc136Q3TVA9 1136 aa18.69■□□□□ 0.58
Lamb3-209ENSMUST00000194677 Acin1Q9JIX8 1338 aaKnown RBP18.63■□□□□ 0.57
Lamb3-209ENSMUST00000194677 Trim41Q5NCC3 630 aa18.6■□□□□ 0.57
Lamb3-209ENSMUST00000194677 Las1lA2BE28 776 aaKnown RBP18.56■□□□□ 0.56
Lamb3-209ENSMUST00000194677 HrcG5E8J6 738 aa18.48■□□□□ 0.55
Lamb3-209ENSMUST00000194677 Cngb1E1AZ71 1325 aa18.47■□□□□ 0.55
Lamb3-209ENSMUST00000194677 Abcc8B2RUS7 1588 aa18.25■□□□□ 0.51
Lamb3-209ENSMUST00000194677 Esf1Q3V1V3 845 aaKnown RBP18.22■□□□□ 0.51
Lamb3-209ENSMUST00000194677 Gm35339A0A140LHH9 1649 aa18.16■□□□□ 0.5
Lamb3-209ENSMUST00000194677 NefmP08553 848 aa18.15■□□□□ 0.5
Lamb3-209ENSMUST00000194677 Gab3Q8BSM5 595 aa18.12■□□□□ 0.49
Lamb3-209ENSMUST00000194677 Zeb1Q64318 1117 aa18.11■□□□□ 0.49
Lamb3-209ENSMUST00000194677 Wdr66E9Q743 1299 aa18.1■□□□□ 0.49
Lamb3-209ENSMUST00000194677 Pcgf6Q99NA9 353 aa17.88■□□□□ 0.45
Lamb3-209ENSMUST00000194677 Npm2Q80W85 207 aa17.83■□□□□ 0.45
Lamb3-209ENSMUST00000194677 Pelp1Q9DBD5 1123 aaKnown RBP17.74■□□□□ 0.43
Lamb3-209ENSMUST00000194677 Zcchc6Q5BLK4 1491 aaKnown RBP17.72■□□□□ 0.43
Lamb3-209ENSMUST00000194677 Myt1lP97500 1187 aa17.69■□□□□ 0.42
Lamb3-209ENSMUST00000194677 CenpbP27790 599 aa17.67■□□□□ 0.42
Lamb3-209ENSMUST00000194677 Dcaf1Q80TR8 1506 aa17.67■□□□□ 0.42
Lamb3-209ENSMUST00000194677 UbtfP25976 765 aaKnown RBP17.61■□□□□ 0.41
Lamb3-209ENSMUST00000194677 Stra8P70278 393 aa17.54■□□□□ 0.4
Lamb3-209ENSMUST00000194677 Cdk11bP24788 784 aaKnown RBP17.48■□□□□ 0.39
Lamb3-209ENSMUST00000194677 Ube2uB1AUC4 352 aa17.47■□□□□ 0.39
Lamb3-209ENSMUST00000194677 Myt1Q8CFC2 1127 aa17.46■□□□□ 0.39
Lamb3-209ENSMUST00000194677 Supt5hO55201 1082 aaKnown RBP17.45■□□□□ 0.38
Lamb3-209ENSMUST00000194677 Cep164Q5DU05 1446 aa17.41■□□□□ 0.38
Lamb3-209ENSMUST00000194677 Rb1cc1Q9ESK9 1588 aa17.38■□□□□ 0.37
Lamb3-209ENSMUST00000194677 Mier1Q5UAK0 511 aa17.3■□□□□ 0.36
Lamb3-209ENSMUST00000194677 Nop58Q6DFW4 536 aaKnown RBP17.3■□□□□ 0.36
Lamb3-209ENSMUST00000194677 Tnnt3Q9QZ47 272 aa17.3■□□□□ 0.36
Lamb3-209ENSMUST00000194677 Brd4Q9ESU6 1400 aaKnown RBP17.25■□□□□ 0.35
Lamb3-209ENSMUST00000194677 TonslQ6NZL6 1363 aa17.21■□□□□ 0.35
Lamb3-209ENSMUST00000194677 Baz1aO88379 1555 aa17.12■□□□□ 0.33
Lamb3-209ENSMUST00000194677 ClspnQ80YR7 1315 aa17.11■□□□□ 0.33
Lamb3-209ENSMUST00000194677 NacadQ5SWP3 1504 aa17.03■□□□□ 0.32
Lamb3-209ENSMUST00000194677 Il27Q8K3I6 234 aa17■□□□□ 0.31
Lamb3-209ENSMUST00000194677 NclP09405 707 aaKnown RBP16.96■□□□□ 0.31
Lamb3-209ENSMUST00000194677 Neurod1Q60867 357 aa16.95■□□□□ 0.3
Lamb3-209ENSMUST00000194677 Chic1Q8CBW7 227 aa16.95■□□□□ 0.3
Lamb3-209ENSMUST00000194677 Anks4bQ8K3X6 423 aa16.95■□□□□ 0.3
Lamb3-209ENSMUST00000194677 Fam50aQ9WV03 339 aaKnown RBP16.92■□□□□ 0.3
Lamb3-209ENSMUST00000194677 Ap3b1Q9Z1T1 1105 aa16.88■□□□□ 0.29
Lamb3-209ENSMUST00000194677 Rtl5Q5DTT4 599 aa16.88■□□□□ 0.29
Lamb3-209ENSMUST00000194677 Sall2Q9QX96 1004 aa16.87■□□□□ 0.29
Lamb3-209ENSMUST00000194677 Slc24a1Q91WD8 1130 aa16.86■□□□□ 0.29
Lamb3-209ENSMUST00000194677 NrdcQ8BHG1 1161 aa16.84■□□□□ 0.29
Lamb3-209ENSMUST00000194677 Golga3P55937 1487 aa16.8■□□□□ 0.28
Lamb3-209ENSMUST00000194677 Clip1Q922J3 1391 aa16.79■□□□□ 0.28
Lamb3-209ENSMUST00000194677 Ppargc1bQ8VHJ7 1014 aa16.78■□□□□ 0.28
Lamb3-209ENSMUST00000194677 Plekhg3Q4VAC9 1341 aa16.77■□□□□ 0.28
Lamb3-209ENSMUST00000194677 Anp32bQ9EST5 272 aaKnown RBP16.76■□□□□ 0.27
Lamb3-209ENSMUST00000194677 Aplp2Q06335 707 aa16.75■□□□□ 0.27
Lamb3-209ENSMUST00000194677 Kdm5dQ62240 1548 aa16.73■□□□□ 0.27
Lamb3-209ENSMUST00000194677 Ccer2J3QPU5 274 aa16.67■□□□□ 0.26
Lamb3-209ENSMUST00000194677 Anp32aO35381 247 aa16.66■□□□□ 0.26
Lamb3-209ENSMUST00000194677 Crybg2B7ZCC2 1516 aa16.61■□□□□ 0.25
Lamb3-209ENSMUST00000194677 NeflP08551 543 aa16.61■□□□□ 0.25
Lamb3-209ENSMUST00000194677 Rsf1E9PWW9 1441 aaKnown RBP16.6■□□□□ 0.25
Lamb3-209ENSMUST00000194677 Csrnp3P59055 597 aa16.59■□□□□ 0.25
Lamb3-209ENSMUST00000194677 Npm1Q61937 292 aaKnown RBP16.58■□□□□ 0.24
Lamb3-209ENSMUST00000194677 Eif5bQ05D44 1216 aaKnown RBP16.55■□□□□ 0.24
Lamb3-209ENSMUST00000194677 Amer1Q7TS75 1132 aa16.53■□□□□ 0.24
Lamb3-209ENSMUST00000194677 Lmod2Q3UHZ5 550 aa16.5■□□□□ 0.23
Lamb3-209ENSMUST00000194677 Eid3Q3V124 375 aa16.45■□□□□ 0.22
Lamb3-209ENSMUST00000194677 ScribQ80U72 1612 aa16.4■□□□□ 0.22
Lamb3-209ENSMUST00000194677 Smarca2Q6DIC0 1577 aa16.39■□□□□ 0.21
Lamb3-209ENSMUST00000194677 4933416C03RikQ3V063 378 aa16.36■□□□□ 0.21
Lamb3-209ENSMUST00000194677 Setd5Q5XJV7 1441 aa16.36■□□□□ 0.21
Lamb3-209ENSMUST00000194677 Aebp2Q9Z248 504 aaKnown RBP16.35■□□□□ 0.21
Lamb3-209ENSMUST00000194677 Eea1Q8BL66 1411 aa16.35■□□□□ 0.21
Lamb3-209ENSMUST00000194677 Ccdc88bQ4QRL3 1481 aa16.34■□□□□ 0.21
Lamb3-209ENSMUST00000194677 BlmO88700 1416 aa16.34■□□□□ 0.21
Lamb3-209ENSMUST00000194677 1700123L14RikQ3V2K7 440 aa16.33■□□□□ 0.2
Lamb3-209ENSMUST00000194677 Sycp2Q9CUU3 1500 aa16.3■□□□□ 0.2
Lamb3-209ENSMUST00000194677 Ttbk1Q6PCN3 1308 aa16.3■□□□□ 0.2
Lamb3-209ENSMUST00000194677 Calr4Q3TQS0 420 aa16.3■□□□□ 0.2
Lamb3-209ENSMUST00000194677 Fmn1Q05860 1466 aa16.29■□□□□ 0.2
Lamb3-209ENSMUST00000194677 DiexfQ8BTT6 772 aaKnown RBP16.29■□□□□ 0.2
Lamb3-209ENSMUST00000194677 Hdac5Q9Z2V6 1113 aa16.25■□□□□ 0.19
Lamb3-209ENSMUST00000194677 Mapk8ip2Q9ERE9 830 aa16.24■□□□□ 0.19
Lamb3-209ENSMUST00000194677 Cep162Q6ZQ06 1403 aa16.24■□□□□ 0.19
Lamb3-209ENSMUST00000194677 Gm38655A0A286YDK6 273 aa16.22■□□□□ 0.19
Lamb3-209ENSMUST00000194677 Os9Q8K2C7 672 aa16.21■□□□□ 0.19
Lamb3-209ENSMUST00000194677 Upf2A2AT37 1269 aaKnown RBP16.18■□□□□ 0.18
Lamb3-209ENSMUST00000194677 Ccdc18Q640L5 1455 aa16.16■□□□□ 0.18
Lamb3-209ENSMUST00000194677 CftrP26361 1476 aa16.15■□□□□ 0.18
Lamb3-209ENSMUST00000194677 Kif15Q6P9L6 1387 aa16.14■□□□□ 0.17
Lamb3-209ENSMUST00000194677 Mia2Q91ZV0 1396 aa16.14■□□□□ 0.17
Lamb3-209ENSMUST00000194677 Wdr43Q6ZQL4 677 aaKnown RBP16.13■□□□□ 0.17
Lamb3-209ENSMUST00000194677 Ubl4bQ9CQ84 188 aa16.1■□□□□ 0.17
Lamb3-209ENSMUST00000194677 Ppp4r2Q0VGB7 417 aa16.09■□□□□ 0.17
Lamb3-209ENSMUST00000194677 Mrs2Q5NCE8 434 aa16.07■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 166 ms