RNA–Protein interactions for RNA: ENSMUST00000189557.1

Trim43b-202, Transcript of Tripartite motif-containing protein 43B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim43b, Length 1,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43b-202ENSMUST00000189557 Gm35339A0A140LHH9 1649 aa14.96□□□□□ -0.01
Trim43b-202ENSMUST00000189557 NischQ80TM9 1593 aa14.77□□□□□ -0.04
Trim43b-202ENSMUST00000189557 Abcc9P70170 1546 aa14.7□□□□□ -0.06
Trim43b-202ENSMUST00000189557 Abcc8B2RUS7 1588 aa14.4□□□□□ -0.1
Trim43b-202ENSMUST00000189557 Chic1Q8CBW7 227 aa14.26□□□□□ -0.13
Trim43b-202ENSMUST00000189557 ScribQ80U72 1612 aa14.08□□□□□ -0.16
Trim43b-202ENSMUST00000189557 Dnajc5bQ9CQ94 199 aa13.83□□□□□ -0.2
Trim43b-202ENSMUST00000189557 NacadQ5SWP3 1504 aa13.64□□□□□ -0.23
Trim43b-202ENSMUST00000189557 Kdm5dQ62240 1548 aa13.56□□□□□ -0.24
Trim43b-202ENSMUST00000189557 Sycp2Q9CUU3 1500 aa13.4□□□□□ -0.26
Trim43b-202ENSMUST00000189557 Plppr3Q7TPB0 716 aa13.29□□□□□ -0.28
Trim43b-202ENSMUST00000189557 BicraF8VPZ9 1578 aa13.27□□□□□ -0.28
Trim43b-202ENSMUST00000189557 Dcaf1Q80TR8 1506 aa13.06□□□□□ -0.32
Trim43b-202ENSMUST00000189557 Pds5bQ4VA53 1446 aaKnown RBP13.05□□□□□ -0.32
Trim43b-202ENSMUST00000189557 Mapk8ip2Q9ERE9 830 aa13.01□□□□□ -0.33
Trim43b-202ENSMUST00000189557 Phf23Q8BSN5 401 aa12.98□□□□□ -0.33
Trim43b-202ENSMUST00000189557 Thoc2B1AZI6 1594 aaKnown RBP12.97□□□□□ -0.33
Trim43b-202ENSMUST00000189557 Ube2uB1AUC4 352 aa12.9□□□□□ -0.34
Trim43b-202ENSMUST00000189557 Kcna4Q61423 654 aa12.89□□□□□ -0.35
Trim43b-202ENSMUST00000189557 Dnajc5P60904 198 aa12.88□□□□□ -0.35
Trim43b-202ENSMUST00000189557 Cc2d2aQ8CFW7 1633 aa12.83□□□□□ -0.36
Trim43b-202ENSMUST00000189557 Atad2bE9Q166 1460 aaKnown RBP12.82□□□□□ -0.36
Trim43b-202ENSMUST00000189557 Rb1cc1Q9ESK9 1588 aa12.8□□□□□ -0.36
Trim43b-202ENSMUST00000189557 Trim41Q5NCC3 630 aa12.73□□□□□ -0.37
Trim43b-202ENSMUST00000189557 Ercc6F8VPZ5 1481 aa12.72□□□□□ -0.37
Trim43b-202ENSMUST00000189557 Gab3Q8BSM5 595 aa12.7□□□□□ -0.38
Trim43b-202ENSMUST00000189557 Ubl4bQ9CQ84 188 aa12.63□□□□□ -0.39
Trim43b-202ENSMUST00000189557 Crybg2B7ZCC2 1516 aa12.61□□□□□ -0.39
Trim43b-202ENSMUST00000189557 Rhox8Q6VSS7 320 aa12.61□□□□□ -0.39
Trim43b-202ENSMUST00000189557 Zcchc6Q5BLK4 1491 aaKnown RBP12.61□□□□□ -0.39
Trim43b-202ENSMUST00000189557 Fam135aQ6NS59 1506 aa12.6□□□□□ -0.39
Trim43b-202ENSMUST00000189557 Smarca2Q6DIC0 1577 aa12.6□□□□□ -0.39
Trim43b-202ENSMUST00000189557 Phldb1Q6PDH0 1371 aaKnown RBP12.58□□□□□ -0.4
Trim43b-202ENSMUST00000189557 Baz1aO88379 1555 aa12.58□□□□□ -0.4
Trim43b-202ENSMUST00000189557 Frmpd1A2AKB4 1549 aa12.5□□□□□ -0.41
Trim43b-202ENSMUST00000189557 Iqgap2Q3UQ44 1575 aa12.49□□□□□ -0.41
Trim43b-202ENSMUST00000189557 Smarca4Q3TKT4 1613 aaKnown RBP12.48□□□□□ -0.41
Trim43b-202ENSMUST00000189557 Cecr2E9Q2Z1 1453 aa12.45□□□□□ -0.42
Trim43b-202ENSMUST00000189557 Wdr62Q3U3T8 1523 aa12.44□□□□□ -0.42
Trim43b-202ENSMUST00000189557 Mrc2Q64449 1479 aa12.39□□□□□ -0.43
Trim43b-202ENSMUST00000189557 Baz1bQ9Z277 1479 aa12.38□□□□□ -0.43
Trim43b-202ENSMUST00000189557 Ccdc180J3QNE4 1664 aa12.32□□□□□ -0.44
Trim43b-202ENSMUST00000189557 Senp3Q9EP97 568 aaKnown RBP12.27□□□□□ -0.45
Trim43b-202ENSMUST00000189557 Ppargc1bQ8VHJ7 1014 aa12.19□□□□□ -0.46
Trim43b-202ENSMUST00000189557 Unc13aQ4KUS2 1712 aa12.13□□□□□ -0.47
Trim43b-202ENSMUST00000189557 Rsf1E9PWW9 1441 aaKnown RBP12.13□□□□□ -0.47
Trim43b-202ENSMUST00000189557 Lrriq1Q0P5X1 1673 aa12.09□□□□□ -0.47
Trim43b-202ENSMUST00000189557 Cux2P70298 1426 aa12.06□□□□□ -0.48
Trim43b-202ENSMUST00000189557 Shroom2A2ALU4 1481 aa12.05□□□□□ -0.48
Trim43b-202ENSMUST00000189557 Pabpn1Q8CCS6 302 aaKnown RBP12.05□□□□□ -0.48
Trim43b-202ENSMUST00000189557 Col17a1Q07563 1470 aa12.04□□□□□ -0.48
Trim43b-202ENSMUST00000189557 CftrP26361 1476 aa12.04□□□□□ -0.48
Trim43b-202ENSMUST00000189557 Npm1Q61937 292 aaKnown RBP12.02□□□□□ -0.49
Trim43b-202ENSMUST00000189557 Esf1Q3V1V3 845 aaKnown RBP12□□□□□ -0.49
Trim43b-202ENSMUST00000189557 Kif15Q6P9L6 1387 aa11.99□□□□□ -0.49
Trim43b-202ENSMUST00000189557 Pelp1Q9DBD5 1123 aaKnown RBP11.97□□□□□ -0.49
Trim43b-202ENSMUST00000189557 Rtl1Q7M732 1744 aa11.96□□□□□ -0.49
Trim43b-202ENSMUST00000189557 Synj1Q8CHC4 1574 aa11.93□□□□□ -0.5
Trim43b-202ENSMUST00000189557 Ccdc136Q3TVA9 1136 aa11.93□□□□□ -0.5
Trim43b-202ENSMUST00000189557 Kif21aQ9QXL2 1672 aa11.92□□□□□ -0.5
Trim43b-202ENSMUST00000189557 Pcdh10E9PXQ7 1057 aa11.91□□□□□ -0.5
Trim43b-202ENSMUST00000189557 Cttnbp2B9EJA2 1648 aa11.9□□□□□ -0.5
Trim43b-202ENSMUST00000189557 Brd4Q9ESU6 1400 aaKnown RBP11.88□□□□□ -0.51
Trim43b-202ENSMUST00000189557 Eif4g3Q80XI3 1579 aaKnown RBP11.88□□□□□ -0.51
Trim43b-202ENSMUST00000189557 Il27Q8K3I6 234 aa11.84□□□□□ -0.51
Trim43b-202ENSMUST00000189557 Urb2E9Q7L1 1524 aaKnown RBP11.84□□□□□ -0.51
Trim43b-202ENSMUST00000189557 Top2bQ64511 1612 aa11.83□□□□□ -0.51
Trim43b-202ENSMUST00000189557 Plb1Q3TTY0 1478 aa11.82□□□□□ -0.52
Trim43b-202ENSMUST00000189557 Cep164Q5DU05 1446 aa11.81□□□□□ -0.52
Trim43b-202ENSMUST00000189557 Dhx29Q6PGC1 1365 aaKnown RBP11.78□□□□□ -0.52
Trim43b-202ENSMUST00000189557 Ttbk1Q6PCN3 1308 aa11.74□□□□□ -0.53
Trim43b-202ENSMUST00000189557 Rpgrip1Q9EPQ2 1331 aa11.72□□□□□ -0.53
Trim43b-202ENSMUST00000189557 Lamc3Q9R0B6 1581 aa11.71□□□□□ -0.54
Trim43b-202ENSMUST00000189557 Zcchc11B2RX14 1644 aaKnown RBP11.68□□□□□ -0.54
Trim43b-202ENSMUST00000189557 LrpprcQ6PB66 1392 aaKnown RBP11.68□□□□□ -0.54
Trim43b-202ENSMUST00000189557 Ehmt2Q9Z148 1263 aaKnown RBP11.67□□□□□ -0.54
Trim43b-202ENSMUST00000189557 Gm156Q58A37 223 aa11.64□□□□□ -0.55
Trim43b-202ENSMUST00000189557 Ift140E9PY46 1464 aa11.61□□□□□ -0.55
Trim43b-202ENSMUST00000189557 Ccdc18Q640L5 1455 aa11.61□□□□□ -0.55
Trim43b-202ENSMUST00000189557 Adgrl3Q80TS3 1537 aa11.6□□□□□ -0.55
Trim43b-202ENSMUST00000189557 Rusc2Q80U22 1514 aa11.59□□□□□ -0.55
Trim43b-202ENSMUST00000189557 Arhgef5E9Q7D5 1581 aa11.59□□□□□ -0.55
Trim43b-202ENSMUST00000189557 Crocc2F6XLV1 1638 aa11.58□□□□□ -0.56
Trim43b-202ENSMUST00000189557 Dmrt2Q8BG36 561 aa11.56□□□□□ -0.56
Trim43b-202ENSMUST00000189557 PtprkP35822 1457 aa11.56□□□□□ -0.56
Trim43b-202ENSMUST00000189557 Slc4a1apE9PX68 744 aa11.56□□□□□ -0.56
Trim43b-202ENSMUST00000189557 PtprtQ99M80 1454 aa11.53□□□□□ -0.56
Trim43b-202ENSMUST00000189557 PogzQ8BZH4 1409 aaKnown RBP11.53□□□□□ -0.56
Trim43b-202ENSMUST00000189557 Disp1Q3TDN0 1521 aa11.52□□□□□ -0.56
Trim43b-202ENSMUST00000189557 Gapvd1Q6PAR5 1458 aa11.48□□□□□ -0.57
Trim43b-202ENSMUST00000189557 Duox2A2AQ99 1517 aa11.48□□□□□ -0.57
Trim43b-202ENSMUST00000189557 Fam71e1A1L3C1 212 aa11.46□□□□□ -0.57
Trim43b-202ENSMUST00000189557 Cc2d2bA0A286YDU8 1405 aa11.46□□□□□ -0.58
Trim43b-202ENSMUST00000189557 Cngb1E1AZ71 1325 aa11.46□□□□□ -0.58
Trim43b-202ENSMUST00000189557 Plekhg3Q4VAC9 1341 aa11.46□□□□□ -0.58
Trim43b-202ENSMUST00000189557 Fgd6Q69ZL1 1399 aa11.45□□□□□ -0.58
Trim43b-202ENSMUST00000189557 Camsap1A2AHC3 1581 aa11.45□□□□□ -0.58
Trim43b-202ENSMUST00000189557 Cep170Q6A065 1588 aa11.45□□□□□ -0.58
Trim43b-202ENSMUST00000189557 Golga3P55937 1487 aa11.43□□□□□ -0.58
Trim43b-202ENSMUST00000189557 Ppp1r18Q8BQ30 594 aa11.42□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 83.1 ms