RNA–Protein interactions for RNA: ENSMUST00000186573.1

Trav18-202, Transcript of T cell receptor alpha variable 18 (Fragment), mousemouse

APPRIS ALT2 BASIC

Gene Trav18, Length 325 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18-202ENSMUST00000186573 Gm35339A0A140LHH9 1649 aa23.22■■□□□ 1.31
Trav18-202ENSMUST00000186573 NischQ80TM9 1593 aa23.02■■□□□ 1.28
Trav18-202ENSMUST00000186573 Abcc9P70170 1546 aa22.26■■□□□ 1.15
Trav18-202ENSMUST00000186573 Abcc8B2RUS7 1588 aa22.21■■□□□ 1.15
Trav18-202ENSMUST00000186573 ScribQ80U72 1612 aa21.29■■□□□ 1
Trav18-202ENSMUST00000186573 NacadQ5SWP3 1504 aa20.76■□□□□ 0.91
Trav18-202ENSMUST00000186573 Kdm5dQ62240 1548 aa20.67■□□□□ 0.9
Trav18-202ENSMUST00000186573 Dcaf1Q80TR8 1506 aa20.53■□□□□ 0.88
Trav18-202ENSMUST00000186573 Sycp2Q9CUU3 1500 aa20.32■□□□□ 0.84
Trav18-202ENSMUST00000186573 Rhox8Q6VSS7 320 aa20.09■□□□□ 0.81
Trav18-202ENSMUST00000186573 Rb1cc1Q9ESK9 1588 aa20.07■□□□□ 0.8
Trav18-202ENSMUST00000186573 BicraF8VPZ9 1578 aa19.95■□□□□ 0.78
Trav18-202ENSMUST00000186573 Ccdc180J3QNE4 1664 aa19.82■□□□□ 0.76
Trav18-202ENSMUST00000186573 Baz1aO88379 1555 aa19.81■□□□□ 0.76
Trav18-202ENSMUST00000186573 Crybg2B7ZCC2 1516 aa19.78■□□□□ 0.76
Trav18-202ENSMUST00000186573 Zcchc6Q5BLK4 1491 aaKnown RBP19.53■□□□□ 0.72
Trav18-202ENSMUST00000186573 Pds5bQ4VA53 1446 aaKnown RBP19.52■□□□□ 0.72
Trav18-202ENSMUST00000186573 Atad2bE9Q166 1460 aaKnown RBP19.32■□□□□ 0.68
Trav18-202ENSMUST00000186573 Dnajc5bQ9CQ94 199 aa19.25■□□□□ 0.67
Trav18-202ENSMUST00000186573 Thoc2B1AZI6 1594 aaKnown RBP19.21■□□□□ 0.67
Trav18-202ENSMUST00000186573 Smarca2Q6DIC0 1577 aa19.21■□□□□ 0.67
Trav18-202ENSMUST00000186573 Smarca4Q3TKT4 1613 aaKnown RBP19.17■□□□□ 0.66
Trav18-202ENSMUST00000186573 Ercc6F8VPZ5 1481 aa19.11■□□□□ 0.65
Trav18-202ENSMUST00000186573 Cecr2E9Q2Z1 1453 aa19.09■□□□□ 0.65
Trav18-202ENSMUST00000186573 Iqgap2Q3UQ44 1575 aa19.04■□□□□ 0.64
Trav18-202ENSMUST00000186573 Rtl1Q7M732 1744 aa18.99■□□□□ 0.63
Trav18-202ENSMUST00000186573 Cc2d2aQ8CFW7 1633 aa18.92■□□□□ 0.62
Trav18-202ENSMUST00000186573 Wdr62Q3U3T8 1523 aa18.86■□□□□ 0.61
Trav18-202ENSMUST00000186573 Frmpd1A2AKB4 1549 aa18.83■□□□□ 0.6
Trav18-202ENSMUST00000186573 Fam135aQ6NS59 1506 aa18.82■□□□□ 0.6
Trav18-202ENSMUST00000186573 Phldb1Q6PDH0 1371 aaKnown RBP18.79■□□□□ 0.6
Trav18-202ENSMUST00000186573 Brd4Q9ESU6 1400 aaKnown RBP18.78■□□□□ 0.6
Trav18-202ENSMUST00000186573 Ccdc136Q3TVA9 1136 aa18.75■□□□□ 0.59
Trav18-202ENSMUST00000186573 Baz1bQ9Z277 1479 aa18.75■□□□□ 0.59
Trav18-202ENSMUST00000186573 CftrP26361 1476 aa18.72■□□□□ 0.59
Trav18-202ENSMUST00000186573 Cttnbp2B9EJA2 1648 aa18.7■□□□□ 0.58
Trav18-202ENSMUST00000186573 Synj1Q8CHC4 1574 aa18.65■□□□□ 0.58
Trav18-202ENSMUST00000186573 Ubl4bQ9CQ84 188 aa18.64■□□□□ 0.57
Trav18-202ENSMUST00000186573 Trim41Q5NCC3 630 aa18.57■□□□□ 0.56
Trav18-202ENSMUST00000186573 Esf1Q3V1V3 845 aaKnown RBP18.53■□□□□ 0.56
Trav18-202ENSMUST00000186573 Unc13aQ4KUS2 1712 aa18.47■□□□□ 0.55
Trav18-202ENSMUST00000186573 Mrc2Q64449 1479 aa18.43■□□□□ 0.54
Trav18-202ENSMUST00000186573 Rsf1E9PWW9 1441 aaKnown RBP18.32■□□□□ 0.52
Trav18-202ENSMUST00000186573 Kif15Q6P9L6 1387 aa18.25■□□□□ 0.51
Trav18-202ENSMUST00000186573 Cux2P70298 1426 aa18.21■□□□□ 0.51
Trav18-202ENSMUST00000186573 Lamc3Q9R0B6 1581 aa18.15■□□□□ 0.5
Trav18-202ENSMUST00000186573 Npm1Q61937 292 aaKnown RBP18.11■□□□□ 0.49
Trav18-202ENSMUST00000186573 Golga3P55937 1487 aa18.1■□□□□ 0.49
Trav18-202ENSMUST00000186573 Cngb1E1AZ71 1325 aa18.07■□□□□ 0.48
Trav18-202ENSMUST00000186573 Cep164Q5DU05 1446 aa18.03■□□□□ 0.48
Trav18-202ENSMUST00000186573 Top2bQ64511 1612 aa18.01■□□□□ 0.47
Trav18-202ENSMUST00000186573 Ccdc18Q640L5 1455 aa17.98■□□□□ 0.47
Trav18-202ENSMUST00000186573 Kif21aQ9QXL2 1672 aa17.96■□□□□ 0.47
Trav18-202ENSMUST00000186573 Lrriq1Q0P5X1 1673 aa17.95■□□□□ 0.46
Trav18-202ENSMUST00000186573 TnnQ80Z71 1560 aa17.95■□□□□ 0.46
Trav18-202ENSMUST00000186573 Il27Q8K3I6 234 aa17.91■□□□□ 0.46
Trav18-202ENSMUST00000186573 Fmn1Q05860 1466 aa17.9■□□□□ 0.46
Trav18-202ENSMUST00000186573 LrpprcQ6PB66 1392 aaKnown RBP17.84■□□□□ 0.45
Trav18-202ENSMUST00000186573 Dhx29Q6PGC1 1365 aaKnown RBP17.83■□□□□ 0.45
Trav18-202ENSMUST00000186573 Camsap1A2AHC3 1581 aa17.83■□□□□ 0.44
Trav18-202ENSMUST00000186573 Eif4g3Q80XI3 1579 aaKnown RBP17.73■□□□□ 0.43
Trav18-202ENSMUST00000186573 Urb2E9Q7L1 1524 aaKnown RBP17.72■□□□□ 0.43
Trav18-202ENSMUST00000186573 Crocc2F6XLV1 1638 aa17.72■□□□□ 0.43
Trav18-202ENSMUST00000186573 Plb1Q3TTY0 1478 aa17.72■□□□□ 0.43
Trav18-202ENSMUST00000186573 PogzQ8BZH4 1409 aaKnown RBP17.72■□□□□ 0.43
Trav18-202ENSMUST00000186573 Ift140E9PY46 1464 aa17.63■□□□□ 0.41
Trav18-202ENSMUST00000186573 Grin2bQ01097 1482 aa17.63■□□□□ 0.41
Trav18-202ENSMUST00000186573 Duox2A2AQ99 1517 aa17.62■□□□□ 0.41
Trav18-202ENSMUST00000186573 Ccdc88bQ4QRL3 1481 aa17.57■□□□□ 0.4
Trav18-202ENSMUST00000186573 Efcab5A0JP43 1406 aa17.56■□□□□ 0.4
Trav18-202ENSMUST00000186573 Top2aQ01320 1528 aaKnown RBP17.52■□□□□ 0.4
Trav18-202ENSMUST00000186573 Shroom2A2ALU4 1481 aa17.5■□□□□ 0.39
Trav18-202ENSMUST00000186573 Rusc2Q80U22 1514 aa17.49■□□□□ 0.39
Trav18-202ENSMUST00000186573 Chic1Q8CBW7 227 aa17.48■□□□□ 0.39
Trav18-202ENSMUST00000186573 NrkQ9R0G8 1455 aa17.48■□□□□ 0.39
Trav18-202ENSMUST00000186573 Disp1Q3TDN0 1521 aa17.46■□□□□ 0.39
Trav18-202ENSMUST00000186573 Dnajc5P60904 198 aa17.45■□□□□ 0.38
Trav18-202ENSMUST00000186573 Samd9lQ69Z37 1561 aa17.42■□□□□ 0.38
Trav18-202ENSMUST00000186573 Cc2d2bA0A286YDU8 1405 aa17.42■□□□□ 0.38
Trav18-202ENSMUST00000186573 Pbrm1Q8BSQ9 1634 aaKnown RBP17.42■□□□□ 0.38
Trav18-202ENSMUST00000186573 Pabpn1Q8CCS6 302 aaKnown RBP17.4■□□□□ 0.38
Trav18-202ENSMUST00000186573 Nup160Q9Z0W3 1402 aaKnown RBP17.39■□□□□ 0.38
Trav18-202ENSMUST00000186573 Shroom4Q1W617 1475 aa17.37■□□□□ 0.37
Trav18-202ENSMUST00000186573 HrcG5E8J6 738 aa17.34■□□□□ 0.37
Trav18-202ENSMUST00000186573 Rad54l2Q99NG0 1466 aa17.34■□□□□ 0.37
Trav18-202ENSMUST00000186573 Zeb1Q64318 1117 aa17.32■□□□□ 0.36
Trav18-202ENSMUST00000186573 Grin2aP35436 1464 aa17.31■□□□□ 0.36
Trav18-202ENSMUST00000186573 Pelp1Q9DBD5 1123 aaKnown RBP17.3■□□□□ 0.36
Trav18-202ENSMUST00000186573 PtprkP35822 1457 aa17.3■□□□□ 0.36
Trav18-202ENSMUST00000186573 Npm2Q80W85 207 aa17.29■□□□□ 0.36
Trav18-202ENSMUST00000186573 AqrQ8CFQ3 1481 aaKnown RBP17.27■□□□□ 0.36
Trav18-202ENSMUST00000186573 Magi3Q9EQJ9 1476 aa17.27■□□□□ 0.36
Trav18-202ENSMUST00000186573 SynmQ70IV5 1561 aa17.25■□□□□ 0.35
Trav18-202ENSMUST00000186573 Setd1bQ8CFT2 1985 aa17.23■□□□□ 0.35
Trav18-202ENSMUST00000186573 Fgd6Q69ZL1 1399 aa17.22■□□□□ 0.35
Trav18-202ENSMUST00000186573 Col17a1Q07563 1470 aa17.18■□□□□ 0.34
Trav18-202ENSMUST00000186573 Pla2r1Q62028 1487 aa17.18■□□□□ 0.34
Trav18-202ENSMUST00000186573 Gpatch8A2A6A1 1505 aa17.17■□□□□ 0.34
Trav18-202ENSMUST00000186573 Mroh2bQ7M6Y6 1581 aa17.15■□□□□ 0.34
Trav18-202ENSMUST00000186573 Zcchc11B2RX14 1644 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 50.3 ms