RNA–Protein interactions for RNA: ENSMUST00000182191.7

Smim1-214, Transcript of Small integral membrane protein 1, mousemouse

TSL 1 (best) BASIC

Gene Smim1, Length 3,535 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1-214ENSMUST00000182191 NischQ80TM9 1593 aa19.83■□□□□ 0.76
Smim1-214ENSMUST00000182191 Gm35339A0A140LHH9 1649 aa19.69■□□□□ 0.74
Smim1-214ENSMUST00000182191 Abcc9P70170 1546 aa19.31■□□□□ 0.68
Smim1-214ENSMUST00000182191 Abcc8B2RUS7 1588 aa18.93■□□□□ 0.62
Smim1-214ENSMUST00000182191 Rpgrip1Q9EPQ2 1331 aa18.84■□□□□ 0.61
Smim1-214ENSMUST00000182191 Rhox8Q6VSS7 320 aa18.51■□□□□ 0.55
Smim1-214ENSMUST00000182191 Acin1Q9JIX8 1338 aaKnown RBP18.23■□□□□ 0.51
Smim1-214ENSMUST00000182191 Ehmt2Q9Z148 1263 aaKnown RBP18.15■□□□□ 0.5
Smim1-214ENSMUST00000182191 Pcgf6Q99NA9 353 aa18.07■□□□□ 0.48
Smim1-214ENSMUST00000182191 Ccdc180J3QNE4 1664 aa17.98■□□□□ 0.47
Smim1-214ENSMUST00000182191 Rtl1Q7M732 1744 aa17.94■□□□□ 0.46
Smim1-214ENSMUST00000182191 ScribQ80U72 1612 aa17.86■□□□□ 0.45
Smim1-214ENSMUST00000182191 Supt5hO55201 1082 aaKnown RBP17.56■□□□□ 0.4
Smim1-214ENSMUST00000182191 Dcaf1Q80TR8 1506 aa17.52■□□□□ 0.39
Smim1-214ENSMUST00000182191 Zcchc6Q5BLK4 1491 aaKnown RBP17.48■□□□□ 0.39
Smim1-214ENSMUST00000182191 Neurod1Q60867 357 aa17.46■□□□□ 0.39
Smim1-214ENSMUST00000182191 Las1lA2BE28 776 aaKnown RBP17.38■□□□□ 0.37
Smim1-214ENSMUST00000182191 Rb1cc1Q9ESK9 1588 aa17.37■□□□□ 0.37
Smim1-214ENSMUST00000182191 Kdm5dQ62240 1548 aa17.36■□□□□ 0.37
Smim1-214ENSMUST00000182191 Trim41Q5NCC3 630 aa17.29■□□□□ 0.36
Smim1-214ENSMUST00000182191 HrcG5E8J6 738 aa17.26■□□□□ 0.35
Smim1-214ENSMUST00000182191 Zeb1Q64318 1117 aa17.18■□□□□ 0.34
Smim1-214ENSMUST00000182191 Baz1aO88379 1555 aa17.14■□□□□ 0.33
Smim1-214ENSMUST00000182191 NacadQ5SWP3 1504 aa17.08■□□□□ 0.32
Smim1-214ENSMUST00000182191 Ccdc136Q3TVA9 1136 aa17.05■□□□□ 0.32
Smim1-214ENSMUST00000182191 1700123L14RikQ3V2K7 440 aa17.04■□□□□ 0.32
Smim1-214ENSMUST00000182191 Cngb1E1AZ71 1325 aa16.99■□□□□ 0.31
Smim1-214ENSMUST00000182191 Csrnp3P59055 597 aa16.95■□□□□ 0.3
Smim1-214ENSMUST00000182191 CenpbP27790 599 aa16.95■□□□□ 0.3
Smim1-214ENSMUST00000182191 Sall2Q9QX96 1004 aa16.84■□□□□ 0.29
Smim1-214ENSMUST00000182191 Anks4bQ8K3X6 423 aa16.84■□□□□ 0.29
Smim1-214ENSMUST00000182191 Myt1Q8CFC2 1127 aa16.83■□□□□ 0.28
Smim1-214ENSMUST00000182191 Smarca2Q6DIC0 1577 aa16.82■□□□□ 0.28
Smim1-214ENSMUST00000182191 Sycp2Q9CUU3 1500 aa16.8■□□□□ 0.28
Smim1-214ENSMUST00000182191 Crybg2B7ZCC2 1516 aa16.77■□□□□ 0.27
Smim1-214ENSMUST00000182191 NefmP08553 848 aa16.76■□□□□ 0.27
Smim1-214ENSMUST00000182191 Wdr66E9Q743 1299 aa16.66■□□□□ 0.26
Smim1-214ENSMUST00000182191 DiexfQ8BTT6 772 aaKnown RBP16.62■□□□□ 0.25
Smim1-214ENSMUST00000182191 Aplp2Q06335 707 aa16.61■□□□□ 0.25
Smim1-214ENSMUST00000182191 BicraF8VPZ9 1578 aa16.61■□□□□ 0.25
Smim1-214ENSMUST00000182191 Gm38655A0A286YDK6 273 aa16.61■□□□□ 0.25
Smim1-214ENSMUST00000182191 Mier1Q5UAK0 511 aa16.61■□□□□ 0.25
Smim1-214ENSMUST00000182191 Cdk11bP24788 784 aaKnown RBP16.58■□□□□ 0.25
Smim1-214ENSMUST00000182191 Gab3Q8BSM5 595 aa16.53■□□□□ 0.24
Smim1-214ENSMUST00000182191 Nop58Q6DFW4 536 aaKnown RBP16.52■□□□□ 0.24
Smim1-214ENSMUST00000182191 Cecr2E9Q2Z1 1453 aa16.51■□□□□ 0.23
Smim1-214ENSMUST00000182191 Ppargc1bQ8VHJ7 1014 aa16.48■□□□□ 0.23
Smim1-214ENSMUST00000182191 Cep164Q5DU05 1446 aa16.43■□□□□ 0.22
Smim1-214ENSMUST00000182191 Aebp2Q9Z248 504 aaKnown RBP16.38■□□□□ 0.21
Smim1-214ENSMUST00000182191 Bcl11aQ9QYE3 773 aa16.36■□□□□ 0.21
Smim1-214ENSMUST00000182191 Synj1Q8CHC4 1574 aa16.31■□□□□ 0.2
Smim1-214ENSMUST00000182191 ClspnQ80YR7 1315 aa16.28■□□□□ 0.2
Smim1-214ENSMUST00000182191 UbtfP25976 765 aaKnown RBP16.22■□□□□ 0.19
Smim1-214ENSMUST00000182191 Fam71e1A1L3C1 212 aa16.2■□□□□ 0.18
Smim1-214ENSMUST00000182191 Rsf1E9PWW9 1441 aaKnown RBP16.2■□□□□ 0.18
Smim1-214ENSMUST00000182191 Chic1Q8CBW7 227 aa16.18■□□□□ 0.18
Smim1-214ENSMUST00000182191 Brd4Q9ESU6 1400 aaKnown RBP16.16■□□□□ 0.18
Smim1-214ENSMUST00000182191 Mapk8ip2Q9ERE9 830 aa16.14■□□□□ 0.17
Smim1-214ENSMUST00000182191 CftrP26361 1476 aa16.14■□□□□ 0.17
Smim1-214ENSMUST00000182191 Ccdc88bQ4QRL3 1481 aa16.14■□□□□ 0.17
Smim1-214ENSMUST00000182191 Top2bQ64511 1612 aa16.08■□□□□ 0.16
Smim1-214ENSMUST00000182191 SafbD3YXK2 937 aaKnown RBP16.07■□□□□ 0.16
Smim1-214ENSMUST00000182191 Golga3P55937 1487 aa16.06■□□□□ 0.16
Smim1-214ENSMUST00000182191 Cttnbp2B9EJA2 1648 aa16.04■□□□□ 0.16
Smim1-214ENSMUST00000182191 Smarca4Q3TKT4 1613 aaKnown RBP16.01■□□□□ 0.15
Smim1-214ENSMUST00000182191 TonslQ6NZL6 1363 aa16■□□□□ 0.15
Smim1-214ENSMUST00000182191 Hnrnpul2Q00PI9 745 aaKnown RBP15.99■□□□□ 0.15
Smim1-214ENSMUST00000182191 PrkcshO08795 521 aa15.98■□□□□ 0.15
Smim1-214ENSMUST00000182191 Cc2d2aQ8CFW7 1633 aa15.97■□□□□ 0.15
Smim1-214ENSMUST00000182191 Tnnt3Q9QZ47 272 aa15.95■□□□□ 0.14
Smim1-214ENSMUST00000182191 Ifnlr1Q8CGK5 535 aa15.93■□□□□ 0.14
Smim1-214ENSMUST00000182191 Ap3b1Q9Z1T1 1105 aa15.89■□□□□ 0.13
Smim1-214ENSMUST00000182191 Iqgap2Q3UQ44 1575 aa15.84■□□□□ 0.13
Smim1-214ENSMUST00000182191 Anp32aO35381 247 aa15.82■□□□□ 0.12
Smim1-214ENSMUST00000182191 Myt1lP97500 1187 aa15.74■□□□□ 0.11
Smim1-214ENSMUST00000182191 Pelp1Q9DBD5 1123 aaKnown RBP15.73■□□□□ 0.11
Smim1-214ENSMUST00000182191 Amer1Q7TS75 1132 aa15.72■□□□□ 0.11
Smim1-214ENSMUST00000182191 Esf1Q3V1V3 845 aaKnown RBP15.7■□□□□ 0.1
Smim1-214ENSMUST00000182191 Rtl5Q5DTT4 599 aa15.68■□□□□ 0.1
Smim1-214ENSMUST00000182191 Top2aQ01320 1528 aaKnown RBP15.68■□□□□ 0.1
Smim1-214ENSMUST00000182191 Atad2bE9Q166 1460 aaKnown RBP15.67■□□□□ 0.1
Smim1-214ENSMUST00000182191 Ttbk1Q6PCN3 1308 aa15.66■□□□□ 0.1
Smim1-214ENSMUST00000182191 Fmn1Q05860 1466 aa15.64■□□□□ 0.09
Smim1-214ENSMUST00000182191 Eid3Q3V124 375 aa15.61■□□□□ 0.09
Smim1-214ENSMUST00000182191 Rapgef2Q8CHG7 1496 aa15.61■□□□□ 0.09
Smim1-214ENSMUST00000182191 Unc13aQ4KUS2 1712 aa15.61■□□□□ 0.09
Smim1-214ENSMUST00000182191 TnnQ80Z71 1560 aa15.6■□□□□ 0.09
Smim1-214ENSMUST00000182191 Stra8P70278 393 aa15.59■□□□□ 0.09
Smim1-214ENSMUST00000182191 Nolc1E9Q5C9 702 aaKnown RBP15.59■□□□□ 0.09
Smim1-214ENSMUST00000182191 Plekhg3Q4VAC9 1341 aa15.57■□□□□ 0.08
Smim1-214ENSMUST00000182191 Frmpd1A2AKB4 1549 aa15.57■□□□□ 0.08
Smim1-214ENSMUST00000182191 Calr4Q3TQS0 420 aa15.55■□□□□ 0.08
Smim1-214ENSMUST00000182191 Eif4g1Q6NZJ6 1600 aaKnown RBP15.55■□□□□ 0.08
Smim1-214ENSMUST00000182191 Wdr62Q3U3T8 1523 aa15.55■□□□□ 0.08
Smim1-214ENSMUST00000182191 Pds5bQ4VA53 1446 aaKnown RBP15.52■□□□□ 0.08
Smim1-214ENSMUST00000182191 Slc24a1Q91WD8 1130 aa15.5■□□□□ 0.07
Smim1-214ENSMUST00000182191 Znf710Q3U288 666 aa15.49■□□□□ 0.07
Smim1-214ENSMUST00000182191 Supt16hQ920B9 1047 aa15.47■□□□□ 0.07
Smim1-214ENSMUST00000182191 Npm2Q80W85 207 aa15.45■□□□□ 0.06
Smim1-214ENSMUST00000182191 Cep162Q6ZQ06 1403 aa15.44■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 98.5 ms