RNA–Protein interactions for RNA: ENSMUST00000179701.1

Trav5d-4-201, Transcript of T cell receptor alpha variable 5D-4 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav5d-4, Length 343 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4-201ENSMUST00000179701 Gm35339A0A140LHH9 1649 aa18.29■□□□□ 0.52
Trav5d-4-201ENSMUST00000179701 NischQ80TM9 1593 aa18.04■□□□□ 0.48
Trav5d-4-201ENSMUST00000179701 Abcc9P70170 1546 aa17.5■□□□□ 0.39
Trav5d-4-201ENSMUST00000179701 Abcc8B2RUS7 1588 aa17.44■□□□□ 0.38
Trav5d-4-201ENSMUST00000179701 Chic1Q8CBW7 227 aa17.16■□□□□ 0.34
Trav5d-4-201ENSMUST00000179701 Dnajc5bQ9CQ94 199 aa16.93■□□□□ 0.3
Trav5d-4-201ENSMUST00000179701 ScribQ80U72 1612 aa16.65■□□□□ 0.26
Trav5d-4-201ENSMUST00000179701 Mapk8ip2Q9ERE9 830 aa16.57■□□□□ 0.24
Trav5d-4-201ENSMUST00000179701 NacadQ5SWP3 1504 aa16.26■□□□□ 0.19
Trav5d-4-201ENSMUST00000179701 Dcaf1Q80TR8 1506 aa16.24■□□□□ 0.19
Trav5d-4-201ENSMUST00000179701 Kdm5dQ62240 1548 aa16.15■□□□□ 0.18
Trav5d-4-201ENSMUST00000179701 Dnajc5P60904 198 aa16.12■□□□□ 0.17
Trav5d-4-201ENSMUST00000179701 Sycp2Q9CUU3 1500 aa15.91■□□□□ 0.14
Trav5d-4-201ENSMUST00000179701 Rb1cc1Q9ESK9 1588 aa15.7■□□□□ 0.1
Trav5d-4-201ENSMUST00000179701 Ccdc180J3QNE4 1664 aa15.69■□□□□ 0.1
Trav5d-4-201ENSMUST00000179701 Crybg2B7ZCC2 1516 aa15.66■□□□□ 0.1
Trav5d-4-201ENSMUST00000179701 BicraF8VPZ9 1578 aa15.64■□□□□ 0.09
Trav5d-4-201ENSMUST00000179701 Thoc2B1AZI6 1594 aaKnown RBP15.63■□□□□ 0.09
Trav5d-4-201ENSMUST00000179701 Rhox8Q6VSS7 320 aa15.57■□□□□ 0.08
Trav5d-4-201ENSMUST00000179701 Baz1aO88379 1555 aa15.55■□□□□ 0.08
Trav5d-4-201ENSMUST00000179701 Trim41Q5NCC3 630 aa15.52■□□□□ 0.08
Trav5d-4-201ENSMUST00000179701 Plppr3Q7TPB0 716 aa15.41■□□□□ 0.06
Trav5d-4-201ENSMUST00000179701 Phf23Q8BSN5 401 aa15.35■□□□□ 0.05
Trav5d-4-201ENSMUST00000179701 Cc2d2aQ8CFW7 1633 aa15.34■□□□□ 0.05
Trav5d-4-201ENSMUST00000179701 Pds5bQ4VA53 1446 aaKnown RBP15.25■□□□□ 0.03
Trav5d-4-201ENSMUST00000179701 Zcchc6Q5BLK4 1491 aaKnown RBP15.2■□□□□ 0.02
Trav5d-4-201ENSMUST00000179701 Atad2bE9Q166 1460 aaKnown RBP15.13■□□□□ 0.01
Trav5d-4-201ENSMUST00000179701 Smarca2Q6DIC0 1577 aa15.11■□□□□ 0.01
Trav5d-4-201ENSMUST00000179701 Gab3Q8BSM5 595 aa15.02■□□□□ -0
Trav5d-4-201ENSMUST00000179701 Smarca4Q3TKT4 1613 aaKnown RBP14.99□□□□□ -0.01
Trav5d-4-201ENSMUST00000179701 Fam135aQ6NS59 1506 aa14.97□□□□□ -0.01
Trav5d-4-201ENSMUST00000179701 Rtl1Q7M732 1744 aa14.92□□□□□ -0.02
Trav5d-4-201ENSMUST00000179701 Cecr2E9Q2Z1 1453 aa14.91□□□□□ -0.02
Trav5d-4-201ENSMUST00000179701 Iqgap2Q3UQ44 1575 aa14.87□□□□□ -0.03
Trav5d-4-201ENSMUST00000179701 Ercc6F8VPZ5 1481 aa14.86□□□□□ -0.03
Trav5d-4-201ENSMUST00000179701 Baz1bQ9Z277 1479 aa14.81□□□□□ -0.04
Trav5d-4-201ENSMUST00000179701 Brd4Q9ESU6 1400 aaKnown RBP14.75□□□□□ -0.05
Trav5d-4-201ENSMUST00000179701 Wdr62Q3U3T8 1523 aa14.75□□□□□ -0.05
Trav5d-4-201ENSMUST00000179701 Frmpd1A2AKB4 1549 aa14.71□□□□□ -0.05
Trav5d-4-201ENSMUST00000179701 CftrP26361 1476 aa14.7□□□□□ -0.06
Trav5d-4-201ENSMUST00000179701 Phldb1Q6PDH0 1371 aaKnown RBP14.68□□□□□ -0.06
Trav5d-4-201ENSMUST00000179701 Col17a1Q07563 1470 aa14.67□□□□□ -0.06
Trav5d-4-201ENSMUST00000179701 Cttnbp2B9EJA2 1648 aa14.66□□□□□ -0.06
Trav5d-4-201ENSMUST00000179701 Mrc2Q64449 1479 aa14.59□□□□□ -0.07
Trav5d-4-201ENSMUST00000179701 Synj1Q8CHC4 1574 aa14.58□□□□□ -0.08
Trav5d-4-201ENSMUST00000179701 Pcdh10E9PXQ7 1057 aa14.56□□□□□ -0.08
Trav5d-4-201ENSMUST00000179701 Shroom2A2ALU4 1481 aa14.55□□□□□ -0.08
Trav5d-4-201ENSMUST00000179701 Ccdc136Q3TVA9 1136 aa14.54□□□□□ -0.08
Trav5d-4-201ENSMUST00000179701 Lrriq1Q0P5X1 1673 aa14.5□□□□□ -0.09
Trav5d-4-201ENSMUST00000179701 Ubl4bQ9CQ84 188 aa14.46□□□□□ -0.09
Trav5d-4-201ENSMUST00000179701 Unc13aQ4KUS2 1712 aa14.44□□□□□ -0.1
Trav5d-4-201ENSMUST00000179701 Kcna4Q61423 654 aa14.36□□□□□ -0.11
Trav5d-4-201ENSMUST00000179701 Senp3Q9EP97 568 aaKnown RBP14.36□□□□□ -0.11
Trav5d-4-201ENSMUST00000179701 Esf1Q3V1V3 845 aaKnown RBP14.34□□□□□ -0.11
Trav5d-4-201ENSMUST00000179701 Cypt1Q8CH20 168 aa14.32□□□□□ -0.12
Trav5d-4-201ENSMUST00000179701 Rsf1E9PWW9 1441 aaKnown RBP14.32□□□□□ -0.12
Trav5d-4-201ENSMUST00000179701 Lamc3Q9R0B6 1581 aa14.25□□□□□ -0.13
Trav5d-4-201ENSMUST00000179701 Golga3P55937 1487 aa14.23□□□□□ -0.13
Trav5d-4-201ENSMUST00000179701 Top2bQ64511 1612 aa14.21□□□□□ -0.13
Trav5d-4-201ENSMUST00000179701 Kif15Q6P9L6 1387 aa14.21□□□□□ -0.14
Trav5d-4-201ENSMUST00000179701 Eif4g3Q80XI3 1579 aaKnown RBP14.19□□□□□ -0.14
Trav5d-4-201ENSMUST00000179701 Cux2P70298 1426 aa14.18□□□□□ -0.14
Trav5d-4-201ENSMUST00000179701 Arhgef5E9Q7D5 1581 aa14.15□□□□□ -0.14
Trav5d-4-201ENSMUST00000179701 Pabpn1Q8CCS6 302 aaKnown RBP14.13□□□□□ -0.15
Trav5d-4-201ENSMUST00000179701 TnnQ80Z71 1560 aa14.12□□□□□ -0.15
Trav5d-4-201ENSMUST00000179701 Kif21aQ9QXL2 1672 aa14.11□□□□□ -0.15
Trav5d-4-201ENSMUST00000179701 Zcchc11B2RX14 1644 aaKnown RBP14.08□□□□□ -0.16
Trav5d-4-201ENSMUST00000179701 Fmn1Q05860 1466 aa14.06□□□□□ -0.16
Trav5d-4-201ENSMUST00000179701 Npm1Q61937 292 aaKnown RBP14.06□□□□□ -0.16
Trav5d-4-201ENSMUST00000179701 Cep164Q5DU05 1446 aa14.06□□□□□ -0.16
Trav5d-4-201ENSMUST00000179701 Ccdc18Q640L5 1455 aa14.06□□□□□ -0.16
Trav5d-4-201ENSMUST00000179701 Pelp1Q9DBD5 1123 aaKnown RBP14.05□□□□□ -0.16
Trav5d-4-201ENSMUST00000179701 Cngb1E1AZ71 1325 aa13.99□□□□□ -0.17
Trav5d-4-201ENSMUST00000179701 Camsap1A2AHC3 1581 aa13.96□□□□□ -0.17
Trav5d-4-201ENSMUST00000179701 LrpprcQ6PB66 1392 aaKnown RBP13.96□□□□□ -0.18
Trav5d-4-201ENSMUST00000179701 Dhx29Q6PGC1 1365 aaKnown RBP13.9□□□□□ -0.18
Trav5d-4-201ENSMUST00000179701 Ttbk1Q6PCN3 1308 aa13.88□□□□□ -0.19
Trav5d-4-201ENSMUST00000179701 PogzQ8BZH4 1409 aaKnown RBP13.87□□□□□ -0.19
Trav5d-4-201ENSMUST00000179701 Adgrl3Q80TS3 1537 aa13.83□□□□□ -0.2
Trav5d-4-201ENSMUST00000179701 Crocc2F6XLV1 1638 aa13.82□□□□□ -0.2
Trav5d-4-201ENSMUST00000179701 Efcab5A0JP43 1406 aa13.81□□□□□ -0.2
Trav5d-4-201ENSMUST00000179701 Grin2bQ01097 1482 aa13.81□□□□□ -0.2
Trav5d-4-201ENSMUST00000179701 Urb2E9Q7L1 1524 aaKnown RBP13.81□□□□□ -0.2
Trav5d-4-201ENSMUST00000179701 Plekhg3Q4VAC9 1341 aa13.81□□□□□ -0.2
Trav5d-4-201ENSMUST00000179701 Il27Q8K3I6 234 aa13.8□□□□□ -0.2
Trav5d-4-201ENSMUST00000179701 Plb1Q3TTY0 1478 aa13.8□□□□□ -0.2
Trav5d-4-201ENSMUST00000179701 Ift140E9PY46 1464 aa13.79□□□□□ -0.2
Trav5d-4-201ENSMUST00000179701 Duox2A2AQ99 1517 aa13.79□□□□□ -0.2
Trav5d-4-201ENSMUST00000179701 Top2aQ01320 1528 aaKnown RBP13.79□□□□□ -0.2
Trav5d-4-201ENSMUST00000179701 Ccdc88bQ4QRL3 1481 aa13.78□□□□□ -0.2
Trav5d-4-201ENSMUST00000179701 NrkQ9R0G8 1455 aa13.76□□□□□ -0.21
Trav5d-4-201ENSMUST00000179701 HrcG5E8J6 738 aa13.76□□□□□ -0.21
Trav5d-4-201ENSMUST00000179701 PtprtQ99M80 1454 aa13.74□□□□□ -0.21
Trav5d-4-201ENSMUST00000179701 Disp1Q3TDN0 1521 aa13.65□□□□□ -0.22
Trav5d-4-201ENSMUST00000179701 Pprc1Q6NZN1 1644 aa13.65□□□□□ -0.22
Trav5d-4-201ENSMUST00000179701 Pbrm1Q8BSQ9 1634 aaKnown RBP13.65□□□□□ -0.22
Trav5d-4-201ENSMUST00000179701 Cc2d2bA0A286YDU8 1405 aa13.64□□□□□ -0.23
Trav5d-4-201ENSMUST00000179701 Rusc2Q80U22 1514 aa13.64□□□□□ -0.23
Trav5d-4-201ENSMUST00000179701 Cep170Q6A065 1588 aa13.64□□□□□ -0.23
Trav5d-4-201ENSMUST00000179701 Nup160Q9Z0W3 1402 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 381.3 ms