RNA–Protein interactions for RNA: ENSMUST00000179512.2

Trav13d-3-201, Transcript of T cell receptor alpha variable 13D-3 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav13d-3, Length 391 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3-201ENSMUST00000179512 NischQ80TM9 1593 aa23.82■■□□□ 1.4
Trav13d-3-201ENSMUST00000179512 Gm35339A0A140LHH9 1649 aa23.72■■□□□ 1.39
Trav13d-3-201ENSMUST00000179512 Abcc9P70170 1546 aa23.17■■□□□ 1.3
Trav13d-3-201ENSMUST00000179512 Abcc8B2RUS7 1588 aa22.77■■□□□ 1.24
Trav13d-3-201ENSMUST00000179512 Rhox8Q6VSS7 320 aa21.51■■□□□ 1.03
Trav13d-3-201ENSMUST00000179512 ScribQ80U72 1612 aa21.38■■□□□ 1.01
Trav13d-3-201ENSMUST00000179512 Dcaf1Q80TR8 1506 aa21.29■■□□□ 1
Trav13d-3-201ENSMUST00000179512 Rtl1Q7M732 1744 aa21.01■□□□□ 0.95
Trav13d-3-201ENSMUST00000179512 Kdm5dQ62240 1548 aa20.94■□□□□ 0.94
Trav13d-3-201ENSMUST00000179512 NacadQ5SWP3 1504 aa20.91■□□□□ 0.94
Trav13d-3-201ENSMUST00000179512 Rb1cc1Q9ESK9 1588 aa20.85■□□□□ 0.93
Trav13d-3-201ENSMUST00000179512 Ccdc180J3QNE4 1664 aa20.73■□□□□ 0.91
Trav13d-3-201ENSMUST00000179512 Baz1aO88379 1555 aa20.63■□□□□ 0.89
Trav13d-3-201ENSMUST00000179512 Sycp2Q9CUU3 1500 aa20.44■□□□□ 0.86
Trav13d-3-201ENSMUST00000179512 Crybg2B7ZCC2 1516 aa20.43■□□□□ 0.86
Trav13d-3-201ENSMUST00000179512 Zcchc6Q5BLK4 1491 aaKnown RBP20.25■□□□□ 0.83
Trav13d-3-201ENSMUST00000179512 Smarca2Q6DIC0 1577 aa20.11■□□□□ 0.81
Trav13d-3-201ENSMUST00000179512 BicraF8VPZ9 1578 aa19.95■□□□□ 0.78
Trav13d-3-201ENSMUST00000179512 Dnajc5bQ9CQ94 199 aa19.94■□□□□ 0.78
Trav13d-3-201ENSMUST00000179512 Ccdc136Q3TVA9 1136 aa19.92■□□□□ 0.78
Trav13d-3-201ENSMUST00000179512 Trim41Q5NCC3 630 aa19.74■□□□□ 0.75
Trav13d-3-201ENSMUST00000179512 Brd4Q9ESU6 1400 aaKnown RBP19.65■□□□□ 0.74
Trav13d-3-201ENSMUST00000179512 Cecr2E9Q2Z1 1453 aa19.64■□□□□ 0.73
Trav13d-3-201ENSMUST00000179512 HrcG5E8J6 738 aa19.55■□□□□ 0.72
Trav13d-3-201ENSMUST00000179512 Smarca4Q3TKT4 1613 aaKnown RBP19.47■□□□□ 0.71
Trav13d-3-201ENSMUST00000179512 Synj1Q8CHC4 1574 aa19.44■□□□□ 0.7
Trav13d-3-201ENSMUST00000179512 CftrP26361 1476 aa19.4■□□□□ 0.7
Trav13d-3-201ENSMUST00000179512 Cttnbp2B9EJA2 1648 aa19.36■□□□□ 0.69
Trav13d-3-201ENSMUST00000179512 Pds5bQ4VA53 1446 aaKnown RBP19.31■□□□□ 0.68
Trav13d-3-201ENSMUST00000179512 Thoc2B1AZI6 1594 aaKnown RBP19.3■□□□□ 0.68
Trav13d-3-201ENSMUST00000179512 Atad2bE9Q166 1460 aaKnown RBP19.29■□□□□ 0.68
Trav13d-3-201ENSMUST00000179512 Golga3P55937 1487 aa19.26■□□□□ 0.67
Trav13d-3-201ENSMUST00000179512 Iqgap2Q3UQ44 1575 aa19.23■□□□□ 0.67
Trav13d-3-201ENSMUST00000179512 Cngb1E1AZ71 1325 aa19.18■□□□□ 0.66
Trav13d-3-201ENSMUST00000179512 Esf1Q3V1V3 845 aaKnown RBP19.16■□□□□ 0.66
Trav13d-3-201ENSMUST00000179512 Cep164Q5DU05 1446 aa19.14■□□□□ 0.65
Trav13d-3-201ENSMUST00000179512 Top2bQ64511 1612 aa19.07■□□□□ 0.64
Trav13d-3-201ENSMUST00000179512 Cc2d2aQ8CFW7 1633 aa19■□□□□ 0.63
Trav13d-3-201ENSMUST00000179512 Rsf1E9PWW9 1441 aaKnown RBP18.99■□□□□ 0.63
Trav13d-3-201ENSMUST00000179512 Ercc6F8VPZ5 1481 aa18.96■□□□□ 0.63
Trav13d-3-201ENSMUST00000179512 Wdr62Q3U3T8 1523 aa18.93■□□□□ 0.62
Trav13d-3-201ENSMUST00000179512 Ccdc88bQ4QRL3 1481 aa18.91■□□□□ 0.62
Trav13d-3-201ENSMUST00000179512 Frmpd1A2AKB4 1549 aa18.88■□□□□ 0.61
Trav13d-3-201ENSMUST00000179512 Fmn1Q05860 1466 aa18.87■□□□□ 0.61
Trav13d-3-201ENSMUST00000179512 Chic1Q8CBW7 227 aa18.87■□□□□ 0.61
Trav13d-3-201ENSMUST00000179512 Fam135aQ6NS59 1506 aa18.76■□□□□ 0.59
Trav13d-3-201ENSMUST00000179512 TnnQ80Z71 1560 aa18.68■□□□□ 0.58
Trav13d-3-201ENSMUST00000179512 Top2aQ01320 1528 aaKnown RBP18.66■□□□□ 0.58
Trav13d-3-201ENSMUST00000179512 Lamc3Q9R0B6 1581 aa18.63■□□□□ 0.57
Trav13d-3-201ENSMUST00000179512 Gab3Q8BSM5 595 aa18.62■□□□□ 0.57
Trav13d-3-201ENSMUST00000179512 Phldb1Q6PDH0 1371 aaKnown RBP18.62■□□□□ 0.57
Trav13d-3-201ENSMUST00000179512 Unc13aQ4KUS2 1712 aa18.58■□□□□ 0.57
Trav13d-3-201ENSMUST00000179512 Kif15Q6P9L6 1387 aa18.55■□□□□ 0.56
Trav13d-3-201ENSMUST00000179512 Rapgef2Q8CHG7 1496 aa18.48■□□□□ 0.55
Trav13d-3-201ENSMUST00000179512 Ubl4bQ9CQ84 188 aa18.46■□□□□ 0.55
Trav13d-3-201ENSMUST00000179512 Baz1bQ9Z277 1479 aa18.42■□□□□ 0.54
Trav13d-3-201ENSMUST00000179512 Camsap1A2AHC3 1581 aa18.4■□□□□ 0.54
Trav13d-3-201ENSMUST00000179512 Ccdc18Q640L5 1455 aa18.39■□□□□ 0.54
Trav13d-3-201ENSMUST00000179512 Rpgrip1Q9EPQ2 1331 aa18.37■□□□□ 0.53
Trav13d-3-201ENSMUST00000179512 Dnajc5P60904 198 aa18.35■□□□□ 0.53
Trav13d-3-201ENSMUST00000179512 Mrc2Q64449 1479 aa18.34■□□□□ 0.53
Trav13d-3-201ENSMUST00000179512 Cux2P70298 1426 aa18.32■□□□□ 0.52
Trav13d-3-201ENSMUST00000179512 Cep162Q6ZQ06 1403 aa18.32■□□□□ 0.52
Trav13d-3-201ENSMUST00000179512 Ehmt2Q9Z148 1263 aaKnown RBP18.32■□□□□ 0.52
Trav13d-3-201ENSMUST00000179512 Npm2Q80W85 207 aa18.3■□□□□ 0.52
Trav13d-3-201ENSMUST00000179512 NrkQ9R0G8 1455 aa18.28■□□□□ 0.52
Trav13d-3-201ENSMUST00000179512 Il27Q8K3I6 234 aa18.28■□□□□ 0.52
Trav13d-3-201ENSMUST00000179512 Acin1Q9JIX8 1338 aaKnown RBP18.25■□□□□ 0.51
Trav13d-3-201ENSMUST00000179512 Grin2bQ01097 1482 aa18.24■□□□□ 0.51
Trav13d-3-201ENSMUST00000179512 Shroom4Q1W617 1475 aa18.24■□□□□ 0.51
Trav13d-3-201ENSMUST00000179512 Npm1Q61937 292 aaKnown RBP18.23■□□□□ 0.51
Trav13d-3-201ENSMUST00000179512 Eif4g1Q6NZJ6 1600 aaKnown RBP18.22■□□□□ 0.51
Trav13d-3-201ENSMUST00000179512 PtprkP35822 1457 aa18.16■□□□□ 0.5
Trav13d-3-201ENSMUST00000179512 Arhgap35Q91YM2 1499 aa18.14■□□□□ 0.49
Trav13d-3-201ENSMUST00000179512 LrpprcQ6PB66 1392 aaKnown RBP18.13■□□□□ 0.49
Trav13d-3-201ENSMUST00000179512 Map3k1P53349 1493 aa18.12■□□□□ 0.49
Trav13d-3-201ENSMUST00000179512 Myt1lP97500 1187 aa18.11■□□□□ 0.49
Trav13d-3-201ENSMUST00000179512 PogzQ8BZH4 1409 aaKnown RBP18.1■□□□□ 0.49
Trav13d-3-201ENSMUST00000179512 Efcab5A0JP43 1406 aa18.09■□□□□ 0.49
Trav13d-3-201ENSMUST00000179512 Mroh2bQ7M6Y6 1581 aa18.02■□□□□ 0.48
Trav13d-3-201ENSMUST00000179512 Duox2A2AQ99 1517 aa18.02■□□□□ 0.47
Trav13d-3-201ENSMUST00000179512 Dhx29Q6PGC1 1365 aaKnown RBP18.01■□□□□ 0.47
Trav13d-3-201ENSMUST00000179512 Zeb1Q64318 1117 aa17.99■□□□□ 0.47
Trav13d-3-201ENSMUST00000179512 AqrQ8CFQ3 1481 aaKnown RBP17.99■□□□□ 0.47
Trav13d-3-201ENSMUST00000179512 Lrriq1Q0P5X1 1673 aa17.99■□□□□ 0.47
Trav13d-3-201ENSMUST00000179512 Clip1Q922J3 1391 aa17.97■□□□□ 0.47
Trav13d-3-201ENSMUST00000179512 Kif21aQ9QXL2 1672 aa17.93■□□□□ 0.46
Trav13d-3-201ENSMUST00000179512 Crocc2F6XLV1 1638 aa17.93■□□□□ 0.46
Trav13d-3-201ENSMUST00000179512 Eea1Q8BL66 1411 aa17.92■□□□□ 0.46
Trav13d-3-201ENSMUST00000179512 Carmil1Q6EDY6 1374 aa17.89■□□□□ 0.45
Trav13d-3-201ENSMUST00000179512 Samd9lQ69Z37 1561 aa17.87■□□□□ 0.45
Trav13d-3-201ENSMUST00000179512 SynmQ70IV5 1561 aa17.87■□□□□ 0.45
Trav13d-3-201ENSMUST00000179512 Setd5Q5XJV7 1441 aa17.83■□□□□ 0.45
Trav13d-3-201ENSMUST00000179512 Arap1Q4LDD4 1452 aa17.79■□□□□ 0.44
Trav13d-3-201ENSMUST00000179512 Erich3F6QRE9 1637 aa17.79■□□□□ 0.44
Trav13d-3-201ENSMUST00000179512 Ankrd26Q811D2 1581 aa17.78■□□□□ 0.44
Trav13d-3-201ENSMUST00000179512 Polr1aO35134 1717 aaKnown RBP17.76■□□□□ 0.43
Trav13d-3-201ENSMUST00000179512 Arhgef5E9Q7D5 1581 aa17.76■□□□□ 0.43
Trav13d-3-201ENSMUST00000179512 Plb1Q3TTY0 1478 aa17.75■□□□□ 0.43
Trav13d-3-201ENSMUST00000179512 Rpap1Q80TE0 1409 aa17.74■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 52.9 ms