RNA–Protein interactions for RNA: ENSMUST00000178426.3

Trav9d-1-201, Transcript of T cell receptor alpha variable 9D-1 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav9d-1, Length 337 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1-201ENSMUST00000178426 Gm35339A0A140LHH9 1649 aa20.67■□□□□ 0.9
Trav9d-1-201ENSMUST00000178426 NischQ80TM9 1593 aa20.46■□□□□ 0.87
Trav9d-1-201ENSMUST00000178426 Abcc9P70170 1546 aa19.81■□□□□ 0.76
Trav9d-1-201ENSMUST00000178426 Abcc8B2RUS7 1588 aa19.74■□□□□ 0.75
Trav9d-1-201ENSMUST00000178426 ScribQ80U72 1612 aa18.96■□□□□ 0.63
Trav9d-1-201ENSMUST00000178426 NacadQ5SWP3 1504 aa18.37■□□□□ 0.53
Trav9d-1-201ENSMUST00000178426 Kdm5dQ62240 1548 aa18.36■□□□□ 0.53
Trav9d-1-201ENSMUST00000178426 Dcaf1Q80TR8 1506 aa18.19■□□□□ 0.5
Trav9d-1-201ENSMUST00000178426 Sycp2Q9CUU3 1500 aa18.01■□□□□ 0.47
Trav9d-1-201ENSMUST00000178426 Rb1cc1Q9ESK9 1588 aa17.83■□□□□ 0.45
Trav9d-1-201ENSMUST00000178426 Rhox8Q6VSS7 320 aa17.8■□□□□ 0.44
Trav9d-1-201ENSMUST00000178426 BicraF8VPZ9 1578 aa17.74■□□□□ 0.43
Trav9d-1-201ENSMUST00000178426 Ccdc180J3QNE4 1664 aa17.61■□□□□ 0.41
Trav9d-1-201ENSMUST00000178426 Baz1aO88379 1555 aa17.59■□□□□ 0.41
Trav9d-1-201ENSMUST00000178426 Crybg2B7ZCC2 1516 aa17.52■□□□□ 0.39
Trav9d-1-201ENSMUST00000178426 Zcchc6Q5BLK4 1491 aaKnown RBP17.31■□□□□ 0.36
Trav9d-1-201ENSMUST00000178426 Pds5bQ4VA53 1446 aaKnown RBP17.21■□□□□ 0.34
Trav9d-1-201ENSMUST00000178426 Smarca2Q6DIC0 1577 aa17.1■□□□□ 0.33
Trav9d-1-201ENSMUST00000178426 Dnajc5bQ9CQ94 199 aa17.08■□□□□ 0.32
Trav9d-1-201ENSMUST00000178426 Atad2bE9Q166 1460 aaKnown RBP17.07■□□□□ 0.32
Trav9d-1-201ENSMUST00000178426 Thoc2B1AZI6 1594 aaKnown RBP17.01■□□□□ 0.31
Trav9d-1-201ENSMUST00000178426 Cecr2E9Q2Z1 1453 aa17■□□□□ 0.31
Trav9d-1-201ENSMUST00000178426 Smarca4Q3TKT4 1613 aaKnown RBP16.99■□□□□ 0.31
Trav9d-1-201ENSMUST00000178426 Rtl1Q7M732 1744 aa16.93■□□□□ 0.3
Trav9d-1-201ENSMUST00000178426 Iqgap2Q3UQ44 1575 aa16.88■□□□□ 0.29
Trav9d-1-201ENSMUST00000178426 Ercc6F8VPZ5 1481 aa16.83■□□□□ 0.28
Trav9d-1-201ENSMUST00000178426 Cc2d2aQ8CFW7 1633 aa16.76■□□□□ 0.27
Trav9d-1-201ENSMUST00000178426 Wdr62Q3U3T8 1523 aa16.71■□□□□ 0.27
Trav9d-1-201ENSMUST00000178426 Frmpd1A2AKB4 1549 aa16.7■□□□□ 0.26
Trav9d-1-201ENSMUST00000178426 Ccdc136Q3TVA9 1136 aa16.67■□□□□ 0.26
Trav9d-1-201ENSMUST00000178426 Fam135aQ6NS59 1506 aa16.65■□□□□ 0.26
Trav9d-1-201ENSMUST00000178426 CftrP26361 1476 aa16.63■□□□□ 0.25
Trav9d-1-201ENSMUST00000178426 Synj1Q8CHC4 1574 aa16.62■□□□□ 0.25
Trav9d-1-201ENSMUST00000178426 Brd4Q9ESU6 1400 aaKnown RBP16.62■□□□□ 0.25
Trav9d-1-201ENSMUST00000178426 Cttnbp2B9EJA2 1648 aa16.6■□□□□ 0.25
Trav9d-1-201ENSMUST00000178426 Phldb1Q6PDH0 1371 aaKnown RBP16.57■□□□□ 0.24
Trav9d-1-201ENSMUST00000178426 Unc13aQ4KUS2 1712 aa16.49■□□□□ 0.23
Trav9d-1-201ENSMUST00000178426 Baz1bQ9Z277 1479 aa16.44■□□□□ 0.22
Trav9d-1-201ENSMUST00000178426 Ubl4bQ9CQ84 188 aa16.42■□□□□ 0.22
Trav9d-1-201ENSMUST00000178426 Trim41Q5NCC3 630 aa16.4■□□□□ 0.22
Trav9d-1-201ENSMUST00000178426 Esf1Q3V1V3 845 aaKnown RBP16.34■□□□□ 0.21
Trav9d-1-201ENSMUST00000178426 Mrc2Q64449 1479 aa16.26■□□□□ 0.19
Trav9d-1-201ENSMUST00000178426 Rsf1E9PWW9 1441 aaKnown RBP16.18■□□□□ 0.18
Trav9d-1-201ENSMUST00000178426 Kif15Q6P9L6 1387 aa16.14■□□□□ 0.17
Trav9d-1-201ENSMUST00000178426 Lamc3Q9R0B6 1581 aa16.12■□□□□ 0.17
Trav9d-1-201ENSMUST00000178426 Cux2P70298 1426 aa16.11■□□□□ 0.17
Trav9d-1-201ENSMUST00000178426 Golga3P55937 1487 aa16.09■□□□□ 0.17
Trav9d-1-201ENSMUST00000178426 Top2bQ64511 1612 aa16.06■□□□□ 0.16
Trav9d-1-201ENSMUST00000178426 Cngb1E1AZ71 1325 aa16.02■□□□□ 0.16
Trav9d-1-201ENSMUST00000178426 TnnQ80Z71 1560 aa15.97■□□□□ 0.15
Trav9d-1-201ENSMUST00000178426 Kif21aQ9QXL2 1672 aa15.95■□□□□ 0.14
Trav9d-1-201ENSMUST00000178426 Npm1Q61937 292 aaKnown RBP15.94■□□□□ 0.14
Trav9d-1-201ENSMUST00000178426 Lrriq1Q0P5X1 1673 aa15.91■□□□□ 0.14
Trav9d-1-201ENSMUST00000178426 Cep164Q5DU05 1446 aa15.89■□□□□ 0.13
Trav9d-1-201ENSMUST00000178426 Fmn1Q05860 1466 aa15.87■□□□□ 0.13
Trav9d-1-201ENSMUST00000178426 Ccdc18Q640L5 1455 aa15.86■□□□□ 0.13
Trav9d-1-201ENSMUST00000178426 Il27Q8K3I6 234 aa15.84■□□□□ 0.13
Trav9d-1-201ENSMUST00000178426 Camsap1A2AHC3 1581 aa15.83■□□□□ 0.13
Trav9d-1-201ENSMUST00000178426 LrpprcQ6PB66 1392 aaKnown RBP15.77■□□□□ 0.12
Trav9d-1-201ENSMUST00000178426 Dhx29Q6PGC1 1365 aaKnown RBP15.77■□□□□ 0.12
Trav9d-1-201ENSMUST00000178426 Urb2E9Q7L1 1524 aaKnown RBP15.71■□□□□ 0.11
Trav9d-1-201ENSMUST00000178426 Ccdc88bQ4QRL3 1481 aa15.71■□□□□ 0.1
Trav9d-1-201ENSMUST00000178426 Plb1Q3TTY0 1478 aa15.7■□□□□ 0.1
Trav9d-1-201ENSMUST00000178426 Crocc2F6XLV1 1638 aa15.69■□□□□ 0.1
Trav9d-1-201ENSMUST00000178426 PogzQ8BZH4 1409 aaKnown RBP15.68■□□□□ 0.1
Trav9d-1-201ENSMUST00000178426 Eif4g3Q80XI3 1579 aaKnown RBP15.67■□□□□ 0.1
Trav9d-1-201ENSMUST00000178426 Grin2bQ01097 1482 aa15.64■□□□□ 0.09
Trav9d-1-201ENSMUST00000178426 Duox2A2AQ99 1517 aa15.63■□□□□ 0.09
Trav9d-1-201ENSMUST00000178426 Chic1Q8CBW7 227 aa15.62■□□□□ 0.09
Trav9d-1-201ENSMUST00000178426 Top2aQ01320 1528 aaKnown RBP15.6■□□□□ 0.09
Trav9d-1-201ENSMUST00000178426 Ift140E9PY46 1464 aa15.55■□□□□ 0.08
Trav9d-1-201ENSMUST00000178426 Efcab5A0JP43 1406 aa15.53■□□□□ 0.08
Trav9d-1-201ENSMUST00000178426 Samd9lQ69Z37 1561 aa15.5■□□□□ 0.07
Trav9d-1-201ENSMUST00000178426 NrkQ9R0G8 1455 aa15.5■□□□□ 0.07
Trav9d-1-201ENSMUST00000178426 Disp1Q3TDN0 1521 aa15.49■□□□□ 0.07
Trav9d-1-201ENSMUST00000178426 Rusc2Q80U22 1514 aa15.47■□□□□ 0.07
Trav9d-1-201ENSMUST00000178426 PtprkP35822 1457 aa15.44■□□□□ 0.06
Trav9d-1-201ENSMUST00000178426 Shroom4Q1W617 1475 aa15.43■□□□□ 0.06
Trav9d-1-201ENSMUST00000178426 Setd1bQ8CFT2 1985 aa15.42■□□□□ 0.06
Trav9d-1-201ENSMUST00000178426 HrcG5E8J6 738 aa15.42■□□□□ 0.06
Trav9d-1-201ENSMUST00000178426 Nup160Q9Z0W3 1402 aaKnown RBP15.41■□□□□ 0.06
Trav9d-1-201ENSMUST00000178426 Rad54l2Q99NG0 1466 aa15.4■□□□□ 0.06
Trav9d-1-201ENSMUST00000178426 Pbrm1Q8BSQ9 1634 aaKnown RBP15.4■□□□□ 0.06
Trav9d-1-201ENSMUST00000178426 Shroom2A2ALU4 1481 aa15.4■□□□□ 0.06
Trav9d-1-201ENSMUST00000178426 Cc2d2bA0A286YDU8 1405 aa15.36■□□□□ 0.05
Trav9d-1-201ENSMUST00000178426 Magi3Q9EQJ9 1476 aa15.35■□□□□ 0.05
Trav9d-1-201ENSMUST00000178426 Grin2aP35436 1464 aa15.34■□□□□ 0.05
Trav9d-1-201ENSMUST00000178426 SynmQ70IV5 1561 aa15.31■□□□□ 0.04
Trav9d-1-201ENSMUST00000178426 Dnajc5P60904 198 aa15.29■□□□□ 0.04
Trav9d-1-201ENSMUST00000178426 Pabpn1Q8CCS6 302 aaKnown RBP15.28■□□□□ 0.04
Trav9d-1-201ENSMUST00000178426 Pla2r1Q62028 1487 aa15.27■□□□□ 0.04
Trav9d-1-201ENSMUST00000178426 AqrQ8CFQ3 1481 aaKnown RBP15.27■□□□□ 0.04
Trav9d-1-201ENSMUST00000178426 Zeb1Q64318 1117 aa15.26■□□□□ 0.03
Trav9d-1-201ENSMUST00000178426 Npm2Q80W85 207 aa15.26■□□□□ 0.03
Trav9d-1-201ENSMUST00000178426 Gpatch8A2A6A1 1505 aa15.25■□□□□ 0.03
Trav9d-1-201ENSMUST00000178426 Mroh2bQ7M6Y6 1581 aa15.24■□□□□ 0.03
Trav9d-1-201ENSMUST00000178426 Gab3Q8BSM5 595 aa15.24■□□□□ 0.03
Trav9d-1-201ENSMUST00000178426 Rapgef2Q8CHG7 1496 aa15.2■□□□□ 0.02
Trav9d-1-201ENSMUST00000178426 Pelp1Q9DBD5 1123 aaKnown RBP15.2■□□□□ 0.02
Trav9d-1-201ENSMUST00000178426 Fgd6Q69ZL1 1399 aa15.18■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 113 ms