RNA–Protein interactions for RNA: ENSMUST00000178252.2

Trav9d-3-201, Transcript of T cell receptor alpha variable 9D-3 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav9d-3, Length 575 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3-201ENSMUST00000178252 Gm35339A0A140LHH9 1649 aa19.05■□□□□ 0.64
Trav9d-3-201ENSMUST00000178252 NischQ80TM9 1593 aa18.62■□□□□ 0.57
Trav9d-3-201ENSMUST00000178252 Abcc8B2RUS7 1588 aa18.08■□□□□ 0.48
Trav9d-3-201ENSMUST00000178252 Abcc9P70170 1546 aa18■□□□□ 0.47
Trav9d-3-201ENSMUST00000178252 ScribQ80U72 1612 aa17.66■□□□□ 0.42
Trav9d-3-201ENSMUST00000178252 NacadQ5SWP3 1504 aa17.01■□□□□ 0.31
Trav9d-3-201ENSMUST00000178252 Kdm5dQ62240 1548 aa16.98■□□□□ 0.31
Trav9d-3-201ENSMUST00000178252 Sycp2Q9CUU3 1500 aa16.7■□□□□ 0.26
Trav9d-3-201ENSMUST00000178252 Dcaf1Q80TR8 1506 aa16.59■□□□□ 0.25
Trav9d-3-201ENSMUST00000178252 BicraF8VPZ9 1578 aa16.54■□□□□ 0.24
Trav9d-3-201ENSMUST00000178252 Dnajc5bQ9CQ94 199 aa16.47■□□□□ 0.23
Trav9d-3-201ENSMUST00000178252 Rb1cc1Q9ESK9 1588 aa16.22■□□□□ 0.19
Trav9d-3-201ENSMUST00000178252 Thoc2B1AZI6 1594 aaKnown RBP16.13■□□□□ 0.17
Trav9d-3-201ENSMUST00000178252 Pds5bQ4VA53 1446 aaKnown RBP16.11■□□□□ 0.17
Trav9d-3-201ENSMUST00000178252 Mapk8ip2Q9ERE9 830 aa15.97■□□□□ 0.15
Trav9d-3-201ENSMUST00000178252 Baz1aO88379 1555 aa15.96■□□□□ 0.14
Trav9d-3-201ENSMUST00000178252 Ccdc180J3QNE4 1664 aa15.95■□□□□ 0.14
Trav9d-3-201ENSMUST00000178252 Crybg2B7ZCC2 1516 aa15.92■□□□□ 0.14
Trav9d-3-201ENSMUST00000178252 Atad2bE9Q166 1460 aaKnown RBP15.89■□□□□ 0.13
Trav9d-3-201ENSMUST00000178252 Cc2d2aQ8CFW7 1633 aa15.86■□□□□ 0.13
Trav9d-3-201ENSMUST00000178252 Ercc6F8VPZ5 1481 aa15.78■□□□□ 0.12
Trav9d-3-201ENSMUST00000178252 Zcchc6Q5BLK4 1491 aaKnown RBP15.76■□□□□ 0.11
Trav9d-3-201ENSMUST00000178252 Rhox8Q6VSS7 320 aa15.73■□□□□ 0.11
Trav9d-3-201ENSMUST00000178252 Smarca2Q6DIC0 1577 aa15.7■□□□□ 0.1
Trav9d-3-201ENSMUST00000178252 Fam135aQ6NS59 1506 aa15.68■□□□□ 0.1
Trav9d-3-201ENSMUST00000178252 Smarca4Q3TKT4 1613 aaKnown RBP15.68■□□□□ 0.1
Trav9d-3-201ENSMUST00000178252 Iqgap2Q3UQ44 1575 aa15.64■□□□□ 0.09
Trav9d-3-201ENSMUST00000178252 Wdr62Q3U3T8 1523 aa15.55■□□□□ 0.08
Trav9d-3-201ENSMUST00000178252 Cecr2E9Q2Z1 1453 aa15.51■□□□□ 0.07
Trav9d-3-201ENSMUST00000178252 Frmpd1A2AKB4 1549 aa15.5■□□□□ 0.07
Trav9d-3-201ENSMUST00000178252 Baz1bQ9Z277 1479 aa15.49■□□□□ 0.07
Trav9d-3-201ENSMUST00000178252 Chic1Q8CBW7 227 aa15.48■□□□□ 0.07
Trav9d-3-201ENSMUST00000178252 Phldb1Q6PDH0 1371 aaKnown RBP15.47■□□□□ 0.07
Trav9d-3-201ENSMUST00000178252 Unc13aQ4KUS2 1712 aa15.37■□□□□ 0.05
Trav9d-3-201ENSMUST00000178252 Ubl4bQ9CQ84 188 aa15.32■□□□□ 0.04
Trav9d-3-201ENSMUST00000178252 Mrc2Q64449 1479 aa15.3■□□□□ 0.04
Trav9d-3-201ENSMUST00000178252 Dnajc5P60904 198 aa15.21■□□□□ 0.03
Trav9d-3-201ENSMUST00000178252 Cttnbp2B9EJA2 1648 aa15.15■□□□□ 0.02
Trav9d-3-201ENSMUST00000178252 CftrP26361 1476 aa15.1■□□□□ 0.01
Trav9d-3-201ENSMUST00000178252 Trim41Q5NCC3 630 aa15.1■□□□□ 0.01
Trav9d-3-201ENSMUST00000178252 Synj1Q8CHC4 1574 aa15.07■□□□□ 0
Trav9d-3-201ENSMUST00000178252 Rtl1Q7M732 1744 aa15.05■□□□□ -0
Trav9d-3-201ENSMUST00000178252 Lrriq1Q0P5X1 1673 aa15.04■□□□□ -0
Trav9d-3-201ENSMUST00000178252 Brd4Q9ESU6 1400 aaKnown RBP14.97□□□□□ -0.01
Trav9d-3-201ENSMUST00000178252 Rsf1E9PWW9 1441 aaKnown RBP14.92□□□□□ -0.02
Trav9d-3-201ENSMUST00000178252 Kif21aQ9QXL2 1672 aa14.91□□□□□ -0.02
Trav9d-3-201ENSMUST00000178252 Cux2P70298 1426 aa14.89□□□□□ -0.03
Trav9d-3-201ENSMUST00000178252 Kif15Q6P9L6 1387 aa14.84□□□□□ -0.03
Trav9d-3-201ENSMUST00000178252 Eif4g3Q80XI3 1579 aaKnown RBP14.81□□□□□ -0.04
Trav9d-3-201ENSMUST00000178252 Esf1Q3V1V3 845 aaKnown RBP14.78□□□□□ -0.04
Trav9d-3-201ENSMUST00000178252 Shroom2A2ALU4 1481 aa14.77□□□□□ -0.04
Trav9d-3-201ENSMUST00000178252 Ccdc136Q3TVA9 1136 aa14.77□□□□□ -0.05
Trav9d-3-201ENSMUST00000178252 Lamc3Q9R0B6 1581 aa14.76□□□□□ -0.05
Trav9d-3-201ENSMUST00000178252 Npm1Q61937 292 aaKnown RBP14.69□□□□□ -0.06
Trav9d-3-201ENSMUST00000178252 Cep164Q5DU05 1446 aa14.65□□□□□ -0.06
Trav9d-3-201ENSMUST00000178252 Urb2E9Q7L1 1524 aaKnown RBP14.62□□□□□ -0.07
Trav9d-3-201ENSMUST00000178252 Col17a1Q07563 1470 aa14.62□□□□□ -0.07
Trav9d-3-201ENSMUST00000178252 Top2bQ64511 1612 aa14.58□□□□□ -0.08
Trav9d-3-201ENSMUST00000178252 Plb1Q3TTY0 1478 aa14.57□□□□□ -0.08
Trav9d-3-201ENSMUST00000178252 Dhx29Q6PGC1 1365 aaKnown RBP14.56□□□□□ -0.08
Trav9d-3-201ENSMUST00000178252 Crocc2F6XLV1 1638 aa14.53□□□□□ -0.08
Trav9d-3-201ENSMUST00000178252 Ccdc18Q640L5 1455 aa14.52□□□□□ -0.08
Trav9d-3-201ENSMUST00000178252 Pabpn1Q8CCS6 302 aaKnown RBP14.52□□□□□ -0.09
Trav9d-3-201ENSMUST00000178252 TnnQ80Z71 1560 aa14.51□□□□□ -0.09
Trav9d-3-201ENSMUST00000178252 Rusc2Q80U22 1514 aa14.48□□□□□ -0.09
Trav9d-3-201ENSMUST00000178252 LrpprcQ6PB66 1392 aaKnown RBP14.47□□□□□ -0.09
Trav9d-3-201ENSMUST00000178252 Il27Q8K3I6 234 aa14.47□□□□□ -0.09
Trav9d-3-201ENSMUST00000178252 Camsap1A2AHC3 1581 aa14.47□□□□□ -0.09
Trav9d-3-201ENSMUST00000178252 Ift140E9PY46 1464 aa14.44□□□□□ -0.1
Trav9d-3-201ENSMUST00000178252 Zcchc11B2RX14 1644 aaKnown RBP14.43□□□□□ -0.1
Trav9d-3-201ENSMUST00000178252 Pelp1Q9DBD5 1123 aaKnown RBP14.41□□□□□ -0.1
Trav9d-3-201ENSMUST00000178252 PogzQ8BZH4 1409 aaKnown RBP14.38□□□□□ -0.11
Trav9d-3-201ENSMUST00000178252 Golga3P55937 1487 aa14.34□□□□□ -0.11
Trav9d-3-201ENSMUST00000178252 Setd1bQ8CFT2 1985 aa14.33□□□□□ -0.12
Trav9d-3-201ENSMUST00000178252 Duox2A2AQ99 1517 aa14.31□□□□□ -0.12
Trav9d-3-201ENSMUST00000178252 Pbrm1Q8BSQ9 1634 aaKnown RBP14.28□□□□□ -0.12
Trav9d-3-201ENSMUST00000178252 Disp1Q3TDN0 1521 aa14.27□□□□□ -0.12
Trav9d-3-201ENSMUST00000178252 Cngb1E1AZ71 1325 aa14.26□□□□□ -0.13
Trav9d-3-201ENSMUST00000178252 Fmn1Q05860 1466 aa14.25□□□□□ -0.13
Trav9d-3-201ENSMUST00000178252 Samd9lQ69Z37 1561 aa14.23□□□□□ -0.13
Trav9d-3-201ENSMUST00000178252 Nup160Q9Z0W3 1402 aaKnown RBP14.23□□□□□ -0.13
Trav9d-3-201ENSMUST00000178252 Grin2bQ01097 1482 aa14.22□□□□□ -0.13
Trav9d-3-201ENSMUST00000178252 Cc2d2bA0A286YDU8 1405 aa14.22□□□□□ -0.13
Trav9d-3-201ENSMUST00000178252 Arhgef5E9Q7D5 1581 aa14.22□□□□□ -0.13
Trav9d-3-201ENSMUST00000178252 Adgrl3Q80TS3 1537 aa14.2□□□□□ -0.14
Trav9d-3-201ENSMUST00000178252 Pcdh10E9PXQ7 1057 aa14.17□□□□□ -0.14
Trav9d-3-201ENSMUST00000178252 Cep170Q6A065 1588 aa14.16□□□□□ -0.14
Trav9d-3-201ENSMUST00000178252 PtprkP35822 1457 aa14.14□□□□□ -0.15
Trav9d-3-201ENSMUST00000178252 Gapvd1Q6PAR5 1458 aa14.12□□□□□ -0.15
Trav9d-3-201ENSMUST00000178252 Efcab5A0JP43 1406 aa14.12□□□□□ -0.15
Trav9d-3-201ENSMUST00000178252 Ttbk1Q6PCN3 1308 aa14.12□□□□□ -0.15
Trav9d-3-201ENSMUST00000178252 AqrQ8CFQ3 1481 aaKnown RBP14.12□□□□□ -0.15
Trav9d-3-201ENSMUST00000178252 Fgd6Q69ZL1 1399 aa14.11□□□□□ -0.15
Trav9d-3-201ENSMUST00000178252 Grin2aP35436 1464 aa14.11□□□□□ -0.15
Trav9d-3-201ENSMUST00000178252 Rad54l2Q99NG0 1466 aa14.1□□□□□ -0.15
Trav9d-3-201ENSMUST00000178252 Magi3Q9EQJ9 1476 aa14.09□□□□□ -0.15
Trav9d-3-201ENSMUST00000178252 PtprtQ99M80 1454 aa14.08□□□□□ -0.16
Trav9d-3-201ENSMUST00000178252 Gm156Q58A37 223 aa14.08□□□□□ -0.16
Trav9d-3-201ENSMUST00000178252 Abcc1O35379 1528 aa14.03□□□□□ -0.16
Trav9d-3-201ENSMUST00000178252 Chd1P40201 1711 aa14.02□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 132.5 ms