RNA–Protein interactions for RNA: ENSMUST00000176769.8

Smarca2-216, Transcript of Probable global transcription activator SNF2L2, mousemouse

TSL 5 BASIC

Gene Smarca2, Length 5,703 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2-216ENSMUST00000176769 NischQ80TM9 1593 aa21.48■■□□□ 1.03
Smarca2-216ENSMUST00000176769 Rhox8Q6VSS7 320 aa21.26■□□□□ 0.99
Smarca2-216ENSMUST00000176769 Abcc9P70170 1546 aa20.52■□□□□ 0.87
Smarca2-216ENSMUST00000176769 Gm35339A0A140LHH9 1649 aa20.34■□□□□ 0.85
Smarca2-216ENSMUST00000176769 Abcc8B2RUS7 1588 aa20.2■□□□□ 0.82
Smarca2-216ENSMUST00000176769 Esf1Q3V1V3 845 aaKnown RBP19.5■□□□□ 0.71
Smarca2-216ENSMUST00000176769 NacadQ5SWP3 1504 aa19.37■□□□□ 0.69
Smarca2-216ENSMUST00000176769 Trim41Q5NCC3 630 aa19.24■□□□□ 0.67
Smarca2-216ENSMUST00000176769 Ccdc136Q3TVA9 1136 aa19.18■□□□□ 0.66
Smarca2-216ENSMUST00000176769 Zcchc6Q5BLK4 1491 aaKnown RBP19.18■□□□□ 0.66
Smarca2-216ENSMUST00000176769 Cngb1E1AZ71 1325 aa18.98■□□□□ 0.63
Smarca2-216ENSMUST00000176769 Kdm5dQ62240 1548 aa18.86■□□□□ 0.61
Smarca2-216ENSMUST00000176769 Rb1cc1Q9ESK9 1588 aa18.79■□□□□ 0.6
Smarca2-216ENSMUST00000176769 Dcaf1Q80TR8 1506 aa18.78■□□□□ 0.6
Smarca2-216ENSMUST00000176769 Zeb1Q64318 1117 aa18.71■□□□□ 0.59
Smarca2-216ENSMUST00000176769 Ercc6F8VPZ5 1481 aa18.65■□□□□ 0.58
Smarca2-216ENSMUST00000176769 Pds5bQ4VA53 1446 aaKnown RBP18.65■□□□□ 0.58
Smarca2-216ENSMUST00000176769 ScribQ80U72 1612 aa18.63■□□□□ 0.57
Smarca2-216ENSMUST00000176769 Sycp2Q9CUU3 1500 aa18.6■□□□□ 0.57
Smarca2-216ENSMUST00000176769 Ubl4bQ9CQ84 188 aa18.54■□□□□ 0.56
Smarca2-216ENSMUST00000176769 Npm1Q61937 292 aaKnown RBP18.53■□□□□ 0.56
Smarca2-216ENSMUST00000176769 Npm2Q80W85 207 aa18.51■□□□□ 0.55
Smarca2-216ENSMUST00000176769 Il27Q8K3I6 234 aa18.51■□□□□ 0.55
Smarca2-216ENSMUST00000176769 Baz1aO88379 1555 aa18.48■□□□□ 0.55
Smarca2-216ENSMUST00000176769 Brd4Q9ESU6 1400 aaKnown RBP18.41■□□□□ 0.54
Smarca2-216ENSMUST00000176769 Crybg2B7ZCC2 1516 aa18.21■□□□□ 0.51
Smarca2-216ENSMUST00000176769 Rtl1Q7M732 1744 aa18.16■□□□□ 0.5
Smarca2-216ENSMUST00000176769 Atad2bE9Q166 1460 aaKnown RBP18.15■□□□□ 0.5
Smarca2-216ENSMUST00000176769 Gab3Q8BSM5 595 aa18.05■□□□□ 0.48
Smarca2-216ENSMUST00000176769 Rsf1E9PWW9 1441 aaKnown RBP18.04■□□□□ 0.48
Smarca2-216ENSMUST00000176769 Myt1lP97500 1187 aa18■□□□□ 0.47
Smarca2-216ENSMUST00000176769 Phldb1Q6PDH0 1371 aaKnown RBP18■□□□□ 0.47
Smarca2-216ENSMUST00000176769 Kif15Q6P9L6 1387 aa17.91■□□□□ 0.46
Smarca2-216ENSMUST00000176769 Pelp1Q9DBD5 1123 aaKnown RBP17.89■□□□□ 0.45
Smarca2-216ENSMUST00000176769 Ttbk1Q6PCN3 1308 aa17.86■□□□□ 0.45
Smarca2-216ENSMUST00000176769 Cep164Q5DU05 1446 aa17.86■□□□□ 0.45
Smarca2-216ENSMUST00000176769 Ccdc180J3QNE4 1664 aa17.84■□□□□ 0.45
Smarca2-216ENSMUST00000176769 Smarca4Q3TKT4 1613 aaKnown RBP17.83■□□□□ 0.44
Smarca2-216ENSMUST00000176769 Ccdc18Q640L5 1455 aa17.79■□□□□ 0.44
Smarca2-216ENSMUST00000176769 Smarca2Q6DIC0 1577 aa17.77■□□□□ 0.44
Smarca2-216ENSMUST00000176769 Iqgap2Q3UQ44 1575 aa17.65■□□□□ 0.42
Smarca2-216ENSMUST00000176769 HrcG5E8J6 738 aa17.65■□□□□ 0.42
Smarca2-216ENSMUST00000176769 Ube2uB1AUC4 352 aa17.59■□□□□ 0.41
Smarca2-216ENSMUST00000176769 BicraF8VPZ9 1578 aa17.58■□□□□ 0.41
Smarca2-216ENSMUST00000176769 Cux2P70298 1426 aa17.54■□□□□ 0.4
Smarca2-216ENSMUST00000176769 Baz1bQ9Z277 1479 aa17.51■□□□□ 0.39
Smarca2-216ENSMUST00000176769 Cecr2E9Q2Z1 1453 aa17.51■□□□□ 0.39
Smarca2-216ENSMUST00000176769 CftrP26361 1476 aa17.51■□□□□ 0.39
Smarca2-216ENSMUST00000176769 Golga3P55937 1487 aa17.5■□□□□ 0.39
Smarca2-216ENSMUST00000176769 Ifnlr1Q8CGK5 535 aa17.47■□□□□ 0.39
Smarca2-216ENSMUST00000176769 Mrc2Q64449 1479 aa17.42■□□□□ 0.38
Smarca2-216ENSMUST00000176769 Cttnbp2B9EJA2 1648 aa17.42■□□□□ 0.38
Smarca2-216ENSMUST00000176769 Cc2d2aQ8CFW7 1633 aa17.36■□□□□ 0.37
Smarca2-216ENSMUST00000176769 Pabpn1Q8CCS6 302 aaKnown RBP17.34■□□□□ 0.37
Smarca2-216ENSMUST00000176769 Dnajc5bQ9CQ94 199 aa17.34■□□□□ 0.37
Smarca2-216ENSMUST00000176769 Fkbp15Q6P9Q6 1216 aaKnown RBP17.29■□□□□ 0.36
Smarca2-216ENSMUST00000176769 Frmpd1A2AKB4 1549 aa17.28■□□□□ 0.36
Smarca2-216ENSMUST00000176769 Synj1Q8CHC4 1574 aa17.27■□□□□ 0.36
Smarca2-216ENSMUST00000176769 Ap3b1Q9Z1T1 1105 aa17.26■□□□□ 0.35
Smarca2-216ENSMUST00000176769 Wdr62Q3U3T8 1523 aa17.25■□□□□ 0.35
Smarca2-216ENSMUST00000176769 Fmn1Q05860 1466 aa17.23■□□□□ 0.35
Smarca2-216ENSMUST00000176769 Arhgap27A2AB59 869 aa17.18■□□□□ 0.34
Smarca2-216ENSMUST00000176769 LrpprcQ6PB66 1392 aaKnown RBP17.18■□□□□ 0.34
Smarca2-216ENSMUST00000176769 Dhx29Q6PGC1 1365 aaKnown RBP17.16■□□□□ 0.34
Smarca2-216ENSMUST00000176769 Gm13697A2AK42 830 aa17.11■□□□□ 0.33
Smarca2-216ENSMUST00000176769 Plppr3Q7TPB0 716 aa17.11■□□□□ 0.33
Smarca2-216ENSMUST00000176769 Ppp1r18Q8BQ30 594 aa17.11■□□□□ 0.33
Smarca2-216ENSMUST00000176769 Fam135aQ6NS59 1506 aa17.09■□□□□ 0.33
Smarca2-216ENSMUST00000176769 AknaQ80VW7 1404 aa17.08■□□□□ 0.33
Smarca2-216ENSMUST00000176769 Thoc2B1AZI6 1594 aaKnown RBP17.06■□□□□ 0.32
Smarca2-216ENSMUST00000176769 Chic1Q8CBW7 227 aa17.06■□□□□ 0.32
Smarca2-216ENSMUST00000176769 NclP09405 707 aaKnown RBP17.04■□□□□ 0.32
Smarca2-216ENSMUST00000176769 Safb2Q80YR5 991 aaKnown RBP17.04■□□□□ 0.32
Smarca2-216ENSMUST00000176769 Cdk11bP24788 784 aaKnown RBP17.03■□□□□ 0.32
Smarca2-216ENSMUST00000176769 Urb2E9Q7L1 1524 aaKnown RBP17.01■□□□□ 0.31
Smarca2-216ENSMUST00000176769 Lmod2Q3UHZ5 550 aa16.96■□□□□ 0.31
Smarca2-216ENSMUST00000176769 UbtfP25976 765 aaKnown RBP16.92■□□□□ 0.3
Smarca2-216ENSMUST00000176769 Clip1Q922J3 1391 aa16.91■□□□□ 0.3
Smarca2-216ENSMUST00000176769 Ift140E9PY46 1464 aa16.91■□□□□ 0.3
Smarca2-216ENSMUST00000176769 Hdac5Q9Z2V6 1113 aa16.89■□□□□ 0.29
Smarca2-216ENSMUST00000176769 Fam50aQ9WV03 339 aaKnown RBP16.88■□□□□ 0.29
Smarca2-216ENSMUST00000176769 Efcab5A0JP43 1406 aa16.83■□□□□ 0.28
Smarca2-216ENSMUST00000176769 Cc2d2bA0A286YDU8 1405 aa16.81■□□□□ 0.28
Smarca2-216ENSMUST00000176769 Hnrnpul2Q00PI9 745 aaKnown RBP16.8■□□□□ 0.28
Smarca2-216ENSMUST00000176769 Fgd6Q69ZL1 1399 aa16.8■□□□□ 0.28
Smarca2-216ENSMUST00000176769 Ehmt2Q9Z148 1263 aaKnown RBP16.79■□□□□ 0.28
Smarca2-216ENSMUST00000176769 Soga1E1U8D0 1418 aa16.79■□□□□ 0.28
Smarca2-216ENSMUST00000176769 Setd5Q5XJV7 1441 aa16.78■□□□□ 0.28
Smarca2-216ENSMUST00000176769 Rpap1Q80TE0 1409 aa16.76■□□□□ 0.27
Smarca2-216ENSMUST00000176769 PogzQ8BZH4 1409 aaKnown RBP16.76■□□□□ 0.27
Smarca2-216ENSMUST00000176769 Plb1Q3TTY0 1478 aa16.73■□□□□ 0.27
Smarca2-216ENSMUST00000176769 Carmil1Q6EDY6 1374 aa16.73■□□□□ 0.27
Smarca2-216ENSMUST00000176769 Arid3cA6PWV5 409 aa16.73■□□□□ 0.27
Smarca2-216ENSMUST00000176769 Lamc3Q9R0B6 1581 aa16.73■□□□□ 0.27
Smarca2-216ENSMUST00000176769 Duox2A2AQ99 1517 aa16.72■□□□□ 0.27
Smarca2-216ENSMUST00000176769 Os9Q8K2C7 672 aa16.7■□□□□ 0.26
Smarca2-216ENSMUST00000176769 Crocc2F6XLV1 1638 aa16.7■□□□□ 0.26
Smarca2-216ENSMUST00000176769 Gm13695A2AK44 830 aa16.7■□□□□ 0.26
Smarca2-216ENSMUST00000176769 Clstn2Q9ER65 966 aa16.68■□□□□ 0.26
Smarca2-216ENSMUST00000176769 Zbtb7cQ8VCZ7 619 aa16.67■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 62.8 ms