RNA–Protein interactions for RNA: ENSMUST00000176185.7

Scn3b-206, Transcript of Sodium channel subunit beta-3, mousemouse

TSL 1 (best) BASIC

Gene Scn3b, Length 4,090 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3b-206ENSMUST00000176185 Rhox8Q6VSS7 320 aa17.05■□□□□ 0.32
Scn3b-206ENSMUST00000176185 NischQ80TM9 1593 aa16.87■□□□□ 0.29
Scn3b-206ENSMUST00000176185 Abcc9P70170 1546 aa16.11■□□□□ 0.17
Scn3b-206ENSMUST00000176185 Abcc8B2RUS7 1588 aa15.78■□□□□ 0.12
Scn3b-206ENSMUST00000176185 Gm35339A0A140LHH9 1649 aa15.75■□□□□ 0.11
Scn3b-206ENSMUST00000176185 Ccdc136Q3TVA9 1136 aa15.6■□□□□ 0.09
Scn3b-206ENSMUST00000176185 Ehmt2Q9Z148 1263 aaKnown RBP15.46■□□□□ 0.07
Scn3b-206ENSMUST00000176185 Rtl1Q7M732 1744 aa15.39■□□□□ 0.05
Scn3b-206ENSMUST00000176185 Ccdc180J3QNE4 1664 aa15.38■□□□□ 0.05
Scn3b-206ENSMUST00000176185 Rpgrip1Q9EPQ2 1331 aa15.36■□□□□ 0.05
Scn3b-206ENSMUST00000176185 Trim41Q5NCC3 630 aa15.16■□□□□ 0.02
Scn3b-206ENSMUST00000176185 Cngb1E1AZ71 1325 aa15.04■□□□□ -0
Scn3b-206ENSMUST00000176185 HrcG5E8J6 738 aa15.02■□□□□ -0
Scn3b-206ENSMUST00000176185 Gab3Q8BSM5 595 aa14.94□□□□□ -0.02
Scn3b-206ENSMUST00000176185 Acin1Q9JIX8 1338 aaKnown RBP14.94□□□□□ -0.02
Scn3b-206ENSMUST00000176185 Zcchc6Q5BLK4 1491 aaKnown RBP14.9□□□□□ -0.02
Scn3b-206ENSMUST00000176185 Esf1Q3V1V3 845 aaKnown RBP14.89□□□□□ -0.03
Scn3b-206ENSMUST00000176185 Rb1cc1Q9ESK9 1588 aa14.79□□□□□ -0.04
Scn3b-206ENSMUST00000176185 Dcaf1Q80TR8 1506 aa14.67□□□□□ -0.06
Scn3b-206ENSMUST00000176185 Zeb1Q64318 1117 aa14.56□□□□□ -0.08
Scn3b-206ENSMUST00000176185 Baz1aO88379 1555 aa14.54□□□□□ -0.08
Scn3b-206ENSMUST00000176185 NacadQ5SWP3 1504 aa14.51□□□□□ -0.09
Scn3b-206ENSMUST00000176185 Kdm5dQ62240 1548 aa14.51□□□□□ -0.09
Scn3b-206ENSMUST00000176185 Myt1lP97500 1187 aa14.49□□□□□ -0.09
Scn3b-206ENSMUST00000176185 Npm2Q80W85 207 aa14.44□□□□□ -0.1
Scn3b-206ENSMUST00000176185 ScribQ80U72 1612 aa14.44□□□□□ -0.1
Scn3b-206ENSMUST00000176185 Pcgf6Q99NA9 353 aa14.42□□□□□ -0.1
Scn3b-206ENSMUST00000176185 Chic1Q8CBW7 227 aa14.39□□□□□ -0.11
Scn3b-206ENSMUST00000176185 Cep164Q5DU05 1446 aa14.37□□□□□ -0.11
Scn3b-206ENSMUST00000176185 UbtfP25976 765 aaKnown RBP14.37□□□□□ -0.11
Scn3b-206ENSMUST00000176185 Wdr66E9Q743 1299 aa14.34□□□□□ -0.11
Scn3b-206ENSMUST00000176185 NefmP08553 848 aa14.32□□□□□ -0.12
Scn3b-206ENSMUST00000176185 Brd4Q9ESU6 1400 aaKnown RBP14.31□□□□□ -0.12
Scn3b-206ENSMUST00000176185 Las1lA2BE28 776 aaKnown RBP14.31□□□□□ -0.12
Scn3b-206ENSMUST00000176185 Supt5hO55201 1082 aaKnown RBP14.23□□□□□ -0.13
Scn3b-206ENSMUST00000176185 Mier1Q5UAK0 511 aa14.19□□□□□ -0.14
Scn3b-206ENSMUST00000176185 Il27Q8K3I6 234 aa14.16□□□□□ -0.14
Scn3b-206ENSMUST00000176185 Rsf1E9PWW9 1441 aaKnown RBP14.11□□□□□ -0.15
Scn3b-206ENSMUST00000176185 Golga3P55937 1487 aa14.06□□□□□ -0.16
Scn3b-206ENSMUST00000176185 Crybg2B7ZCC2 1516 aa14.06□□□□□ -0.16
Scn3b-206ENSMUST00000176185 Sycp2Q9CUU3 1500 aa14.06□□□□□ -0.16
Scn3b-206ENSMUST00000176185 Smarca2Q6DIC0 1577 aa14.05□□□□□ -0.16
Scn3b-206ENSMUST00000176185 Ap3b1Q9Z1T1 1105 aa13.99□□□□□ -0.17
Scn3b-206ENSMUST00000176185 Ccdc88bQ4QRL3 1481 aa13.98□□□□□ -0.17
Scn3b-206ENSMUST00000176185 Cecr2E9Q2Z1 1453 aa13.96□□□□□ -0.17
Scn3b-206ENSMUST00000176185 Ppargc1bQ8VHJ7 1014 aa13.95□□□□□ -0.18
Scn3b-206ENSMUST00000176185 Plekhg3Q4VAC9 1341 aa13.94□□□□□ -0.18
Scn3b-206ENSMUST00000176185 Ube2uB1AUC4 352 aa13.92□□□□□ -0.18
Scn3b-206ENSMUST00000176185 Sall2Q9QX96 1004 aa13.84□□□□□ -0.19
Scn3b-206ENSMUST00000176185 TonslQ6NZL6 1363 aa13.82□□□□□ -0.2
Scn3b-206ENSMUST00000176185 Clip1Q922J3 1391 aa13.81□□□□□ -0.2
Scn3b-206ENSMUST00000176185 CftrP26361 1476 aa13.8□□□□□ -0.2
Scn3b-206ENSMUST00000176185 Synj1Q8CHC4 1574 aa13.79□□□□□ -0.2
Scn3b-206ENSMUST00000176185 Cdk11bP24788 784 aaKnown RBP13.79□□□□□ -0.2
Scn3b-206ENSMUST00000176185 Fam50aQ9WV03 339 aaKnown RBP13.78□□□□□ -0.2
Scn3b-206ENSMUST00000176185 Neurod1Q60867 357 aa13.77□□□□□ -0.21
Scn3b-206ENSMUST00000176185 Nop58Q6DFW4 536 aaKnown RBP13.76□□□□□ -0.21
Scn3b-206ENSMUST00000176185 Lmod2Q3UHZ5 550 aa13.68□□□□□ -0.22
Scn3b-206ENSMUST00000176185 Eid3Q3V124 375 aa13.68□□□□□ -0.22
Scn3b-206ENSMUST00000176185 Npm1Q61937 292 aaKnown RBP13.68□□□□□ -0.22
Scn3b-206ENSMUST00000176185 ClspnQ80YR7 1315 aa13.67□□□□□ -0.22
Scn3b-206ENSMUST00000176185 Fmn1Q05860 1466 aa13.62□□□□□ -0.23
Scn3b-206ENSMUST00000176185 Aebp2Q9Z248 504 aaKnown RBP13.61□□□□□ -0.23
Scn3b-206ENSMUST00000176185 NclP09405 707 aaKnown RBP13.61□□□□□ -0.23
Scn3b-206ENSMUST00000176185 Cep162Q6ZQ06 1403 aa13.6□□□□□ -0.23
Scn3b-206ENSMUST00000176185 Kif15Q6P9L6 1387 aa13.57□□□□□ -0.24
Scn3b-206ENSMUST00000176185 Cttnbp2B9EJA2 1648 aa13.55□□□□□ -0.24
Scn3b-206ENSMUST00000176185 Smarca4Q3TKT4 1613 aaKnown RBP13.55□□□□□ -0.24
Scn3b-206ENSMUST00000176185 Setd5Q5XJV7 1441 aa13.54□□□□□ -0.24
Scn3b-206ENSMUST00000176185 Ubl4bQ9CQ84 188 aa13.52□□□□□ -0.24
Scn3b-206ENSMUST00000176185 BicraF8VPZ9 1578 aa13.52□□□□□ -0.25
Scn3b-206ENSMUST00000176185 Slc24a1Q91WD8 1130 aa13.51□□□□□ -0.25
Scn3b-206ENSMUST00000176185 Rapgef2Q8CHG7 1496 aa13.51□□□□□ -0.25
Scn3b-206ENSMUST00000176185 CenpbP27790 599 aa13.49□□□□□ -0.25
Scn3b-206ENSMUST00000176185 Mapk8ip2Q9ERE9 830 aa13.49□□□□□ -0.25
Scn3b-206ENSMUST00000176185 BlmO88700 1416 aa13.48□□□□□ -0.25
Scn3b-206ENSMUST00000176185 Pds5bQ4VA53 1446 aaKnown RBP13.47□□□□□ -0.25
Scn3b-206ENSMUST00000176185 Eea1Q8BL66 1411 aa13.47□□□□□ -0.25
Scn3b-206ENSMUST00000176185 Anks4bQ8K3X6 423 aa13.47□□□□□ -0.25
Scn3b-206ENSMUST00000176185 Stra8P70278 393 aa13.44□□□□□ -0.26
Scn3b-206ENSMUST00000176185 Cc2d2aQ8CFW7 1633 aa13.42□□□□□ -0.26
Scn3b-206ENSMUST00000176185 Csrnp3P59055 597 aa13.42□□□□□ -0.26
Scn3b-206ENSMUST00000176185 Atad2bE9Q166 1460 aaKnown RBP13.42□□□□□ -0.26
Scn3b-206ENSMUST00000176185 Ercc6F8VPZ5 1481 aa13.4□□□□□ -0.26
Scn3b-206ENSMUST00000176185 Iqgap2Q3UQ44 1575 aa13.38□□□□□ -0.27
Scn3b-206ENSMUST00000176185 Ccdc18Q640L5 1455 aa13.37□□□□□ -0.27
Scn3b-206ENSMUST00000176185 Top2bQ64511 1612 aa13.35□□□□□ -0.27
Scn3b-206ENSMUST00000176185 Tnnt3Q9QZ47 272 aa13.33□□□□□ -0.28
Scn3b-206ENSMUST00000176185 Top2aQ01320 1528 aaKnown RBP13.33□□□□□ -0.28
Scn3b-206ENSMUST00000176185 Gm38655A0A286YDK6 273 aa13.31□□□□□ -0.28
Scn3b-206ENSMUST00000176185 Chic2Q9D9G3 165 aa13.31□□□□□ -0.28
Scn3b-206ENSMUST00000176185 Ccer2J3QPU5 274 aa13.26□□□□□ -0.29
Scn3b-206ENSMUST00000176185 Eif5bQ05D44 1216 aaKnown RBP13.21□□□□□ -0.29
Scn3b-206ENSMUST00000176185 Baz1bQ9Z277 1479 aa13.2□□□□□ -0.3
Scn3b-206ENSMUST00000176185 NrdcQ8BHG1 1161 aa13.2□□□□□ -0.3
Scn3b-206ENSMUST00000176185 1700123L14RikQ3V2K7 440 aa13.2□□□□□ -0.3
Scn3b-206ENSMUST00000176185 Cux2P70298 1426 aa13.19□□□□□ -0.3
Scn3b-206ENSMUST00000176185 Zbtb7cQ8VCZ7 619 aa13.17□□□□□ -0.3
Scn3b-206ENSMUST00000176185 Arhgap35Q91YM2 1499 aa13.16□□□□□ -0.3
Scn3b-206ENSMUST00000176185 PtprkP35822 1457 aa13.15□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 273.3 ms