RNA–Protein interactions for RNA: ENSMUST00000174387.1

Usp3-211, Transcript of Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

TSL 5 BASIC

Gene Usp3, Length 1,901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3-211ENSMUST00000174387 NischQ80TM9 1593 aa24.89■■□□□ 1.58
Usp3-211ENSMUST00000174387 Gm35339A0A140LHH9 1649 aa24.79■■□□□ 1.56
Usp3-211ENSMUST00000174387 Abcc9P70170 1546 aa24.21■■□□□ 1.47
Usp3-211ENSMUST00000174387 Abcc8B2RUS7 1588 aa23.77■■□□□ 1.4
Usp3-211ENSMUST00000174387 Rhox8Q6VSS7 320 aa22.47■■□□□ 1.19
Usp3-211ENSMUST00000174387 Dcaf1Q80TR8 1506 aa22.29■■□□□ 1.16
Usp3-211ENSMUST00000174387 ScribQ80U72 1612 aa22.28■■□□□ 1.16
Usp3-211ENSMUST00000174387 Rtl1Q7M732 1744 aa22.18■■□□□ 1.14
Usp3-211ENSMUST00000174387 Kdm5dQ62240 1548 aa21.81■■□□□ 1.08
Usp3-211ENSMUST00000174387 NacadQ5SWP3 1504 aa21.78■■□□□ 1.08
Usp3-211ENSMUST00000174387 Rb1cc1Q9ESK9 1588 aa21.77■■□□□ 1.08
Usp3-211ENSMUST00000174387 Ccdc180J3QNE4 1664 aa21.76■■□□□ 1.07
Usp3-211ENSMUST00000174387 Baz1aO88379 1555 aa21.58■■□□□ 1.04
Usp3-211ENSMUST00000174387 Crybg2B7ZCC2 1516 aa21.41■■□□□ 1.02
Usp3-211ENSMUST00000174387 Zcchc6Q5BLK4 1491 aaKnown RBP21.33■■□□□ 1
Usp3-211ENSMUST00000174387 Sycp2Q9CUU3 1500 aa21.29■■□□□ 1
Usp3-211ENSMUST00000174387 Smarca2Q6DIC0 1577 aa21.04■□□□□ 0.96
Usp3-211ENSMUST00000174387 Ccdc136Q3TVA9 1136 aa20.83■□□□□ 0.93
Usp3-211ENSMUST00000174387 BicraF8VPZ9 1578 aa20.79■□□□□ 0.92
Usp3-211ENSMUST00000174387 Trim41Q5NCC3 630 aa20.68■□□□□ 0.9
Usp3-211ENSMUST00000174387 HrcG5E8J6 738 aa20.65■□□□□ 0.9
Usp3-211ENSMUST00000174387 Brd4Q9ESU6 1400 aaKnown RBP20.55■□□□□ 0.88
Usp3-211ENSMUST00000174387 Cecr2E9Q2Z1 1453 aa20.49■□□□□ 0.87
Usp3-211ENSMUST00000174387 Synj1Q8CHC4 1574 aa20.29■□□□□ 0.84
Usp3-211ENSMUST00000174387 Smarca4Q3TKT4 1613 aaKnown RBP20.29■□□□□ 0.84
Usp3-211ENSMUST00000174387 CftrP26361 1476 aa20.27■□□□□ 0.84
Usp3-211ENSMUST00000174387 Cttnbp2B9EJA2 1648 aa20.23■□□□□ 0.83
Usp3-211ENSMUST00000174387 Golga3P55937 1487 aa20.16■□□□□ 0.82
Usp3-211ENSMUST00000174387 Cep164Q5DU05 1446 aa20.13■□□□□ 0.81
Usp3-211ENSMUST00000174387 Atad2bE9Q166 1460 aaKnown RBP20.08■□□□□ 0.8
Usp3-211ENSMUST00000174387 Pds5bQ4VA53 1446 aaKnown RBP20.07■□□□□ 0.8
Usp3-211ENSMUST00000174387 Iqgap2Q3UQ44 1575 aa20.03■□□□□ 0.8
Usp3-211ENSMUST00000174387 Cngb1E1AZ71 1325 aa20■□□□□ 0.79
Usp3-211ENSMUST00000174387 Top2bQ64511 1612 aa19.99■□□□□ 0.79
Usp3-211ENSMUST00000174387 Esf1Q3V1V3 845 aaKnown RBP19.96■□□□□ 0.79
Usp3-211ENSMUST00000174387 Rsf1E9PWW9 1441 aaKnown RBP19.91■□□□□ 0.78
Usp3-211ENSMUST00000174387 Ccdc88bQ4QRL3 1481 aa19.83■□□□□ 0.76
Usp3-211ENSMUST00000174387 Chic1Q8CBW7 227 aa19.8■□□□□ 0.76
Usp3-211ENSMUST00000174387 Fmn1Q05860 1466 aa19.75■□□□□ 0.75
Usp3-211ENSMUST00000174387 Wdr62Q3U3T8 1523 aa19.71■□□□□ 0.75
Usp3-211ENSMUST00000174387 Cc2d2aQ8CFW7 1633 aa19.69■□□□□ 0.74
Usp3-211ENSMUST00000174387 Frmpd1A2AKB4 1549 aa19.66■□□□□ 0.74
Usp3-211ENSMUST00000174387 Ercc6F8VPZ5 1481 aa19.66■□□□□ 0.74
Usp3-211ENSMUST00000174387 Rpgrip1Q9EPQ2 1331 aa19.6■□□□□ 0.73
Usp3-211ENSMUST00000174387 Top2aQ01320 1528 aaKnown RBP19.56■□□□□ 0.72
Usp3-211ENSMUST00000174387 TnnQ80Z71 1560 aa19.54■□□□□ 0.72
Usp3-211ENSMUST00000174387 Gab3Q8BSM5 595 aa19.47■□□□□ 0.71
Usp3-211ENSMUST00000174387 Thoc2B1AZI6 1594 aaKnown RBP19.46■□□□□ 0.71
Usp3-211ENSMUST00000174387 Lamc3Q9R0B6 1581 aa19.46■□□□□ 0.71
Usp3-211ENSMUST00000174387 Rapgef2Q8CHG7 1496 aa19.4■□□□□ 0.7
Usp3-211ENSMUST00000174387 Unc13aQ4KUS2 1712 aa19.39■□□□□ 0.69
Usp3-211ENSMUST00000174387 Acin1Q9JIX8 1338 aaKnown RBP19.38■□□□□ 0.69
Usp3-211ENSMUST00000174387 Phldb1Q6PDH0 1371 aaKnown RBP19.36■□□□□ 0.69
Usp3-211ENSMUST00000174387 Kif15Q6P9L6 1387 aa19.3■□□□□ 0.68
Usp3-211ENSMUST00000174387 Ehmt2Q9Z148 1263 aaKnown RBP19.26■□□□□ 0.67
Usp3-211ENSMUST00000174387 Fam135aQ6NS59 1506 aa19.26■□□□□ 0.67
Usp3-211ENSMUST00000174387 Cep162Q6ZQ06 1403 aa19.21■□□□□ 0.67
Usp3-211ENSMUST00000174387 Camsap1A2AHC3 1581 aa19.21■□□□□ 0.67
Usp3-211ENSMUST00000174387 Ccdc18Q640L5 1455 aa19.19■□□□□ 0.66
Usp3-211ENSMUST00000174387 Baz1bQ9Z277 1479 aa19.17■□□□□ 0.66
Usp3-211ENSMUST00000174387 Eif4g1Q6NZJ6 1600 aaKnown RBP19.15■□□□□ 0.66
Usp3-211ENSMUST00000174387 NrkQ9R0G8 1455 aa19.14■□□□□ 0.65
Usp3-211ENSMUST00000174387 Ubl4bQ9CQ84 188 aa19.1■□□□□ 0.65
Usp3-211ENSMUST00000174387 Npm2Q80W85 207 aa19.09■□□□□ 0.65
Usp3-211ENSMUST00000174387 Shroom4Q1W617 1475 aa19.07■□□□□ 0.64
Usp3-211ENSMUST00000174387 Cux2P70298 1426 aa19.06■□□□□ 0.64
Usp3-211ENSMUST00000174387 Grin2bQ01097 1482 aa19.05■□□□□ 0.64
Usp3-211ENSMUST00000174387 PtprkP35822 1457 aa19■□□□□ 0.63
Usp3-211ENSMUST00000174387 Il27Q8K3I6 234 aa19■□□□□ 0.63
Usp3-211ENSMUST00000174387 Map3k1P53349 1493 aa18.99■□□□□ 0.63
Usp3-211ENSMUST00000174387 Arhgap35Q91YM2 1499 aa18.99■□□□□ 0.63
Usp3-211ENSMUST00000174387 Npm1Q61937 292 aaKnown RBP18.96■□□□□ 0.63
Usp3-211ENSMUST00000174387 Efcab5A0JP43 1406 aa18.92■□□□□ 0.62
Usp3-211ENSMUST00000174387 Myt1lP97500 1187 aa18.92■□□□□ 0.62
Usp3-211ENSMUST00000174387 LrpprcQ6PB66 1392 aaKnown RBP18.91■□□□□ 0.62
Usp3-211ENSMUST00000174387 PogzQ8BZH4 1409 aaKnown RBP18.87■□□□□ 0.61
Usp3-211ENSMUST00000174387 Mroh2bQ7M6Y6 1581 aa18.87■□□□□ 0.61
Usp3-211ENSMUST00000174387 AqrQ8CFQ3 1481 aaKnown RBP18.83■□□□□ 0.61
Usp3-211ENSMUST00000174387 Clip1Q922J3 1391 aa18.82■□□□□ 0.6
Usp3-211ENSMUST00000174387 Mrc2Q64449 1479 aa18.81■□□□□ 0.6
Usp3-211ENSMUST00000174387 Duox2A2AQ99 1517 aa18.8■□□□□ 0.6
Usp3-211ENSMUST00000174387 Eea1Q8BL66 1411 aa18.79■□□□□ 0.6
Usp3-211ENSMUST00000174387 Dhx29Q6PGC1 1365 aaKnown RBP18.74■□□□□ 0.59
Usp3-211ENSMUST00000174387 Zeb1Q64318 1117 aa18.72■□□□□ 0.59
Usp3-211ENSMUST00000174387 Carmil1Q6EDY6 1374 aa18.7■□□□□ 0.58
Usp3-211ENSMUST00000174387 Setd5Q5XJV7 1441 aa18.67■□□□□ 0.58
Usp3-211ENSMUST00000174387 Crocc2F6XLV1 1638 aa18.67■□□□□ 0.58
Usp3-211ENSMUST00000174387 Erich3F6QRE9 1637 aa18.66■□□□□ 0.58
Usp3-211ENSMUST00000174387 NefmP08553 848 aa18.66■□□□□ 0.58
Usp3-211ENSMUST00000174387 Mier1Q5UAK0 511 aa18.66■□□□□ 0.58
Usp3-211ENSMUST00000174387 SynmQ70IV5 1561 aa18.65■□□□□ 0.58
Usp3-211ENSMUST00000174387 Arap1Q4LDD4 1452 aa18.65■□□□□ 0.58
Usp3-211ENSMUST00000174387 Kif21aQ9QXL2 1672 aa18.65■□□□□ 0.58
Usp3-211ENSMUST00000174387 Arhgef5E9Q7D5 1581 aa18.65■□□□□ 0.58
Usp3-211ENSMUST00000174387 Dnajc5bQ9CQ94 199 aa18.64■□□□□ 0.57
Usp3-211ENSMUST00000174387 Samd9lQ69Z37 1561 aa18.63■□□□□ 0.57
Usp3-211ENSMUST00000174387 Ankrd26Q811D2 1581 aa18.61■□□□□ 0.57
Usp3-211ENSMUST00000174387 UbtfP25976 765 aaKnown RBP18.59■□□□□ 0.57
Usp3-211ENSMUST00000174387 Polr1aO35134 1717 aaKnown RBP18.59■□□□□ 0.57
Usp3-211ENSMUST00000174387 Rpap1Q80TE0 1409 aa18.58■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms