RNA–Protein interactions for RNA: ENSMUST00000167924.1

Tnf-202, Transcript of Tumor necrosis factor, mousemouse

TSL 1 (best) BASIC

Gene Tnf, Length 1,462 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tnf-202ENSMUST00000167924 Mapk8ip2Q9ERE9 830 aa19.7■□□□□ 0.74
Tnf-202ENSMUST00000167924 Chic1Q8CBW7 227 aa19.04■□□□□ 0.64
Tnf-202ENSMUST00000167924 NischQ80TM9 1593 aa18.05■□□□□ 0.48
Tnf-202ENSMUST00000167924 Gm35339A0A140LHH9 1649 aa18.01■□□□□ 0.47
Tnf-202ENSMUST00000167924 Abcc9P70170 1546 aa17.56■□□□□ 0.4
Tnf-202ENSMUST00000167924 Abcc8B2RUS7 1588 aa17.24■□□□□ 0.35
Tnf-202ENSMUST00000167924 Phf23Q8BSN5 401 aa17.03■□□□□ 0.32
Tnf-202ENSMUST00000167924 Rhox8Q6VSS7 320 aa16.28■□□□□ 0.2
Tnf-202ENSMUST00000167924 ScribQ80U72 1612 aa16.26■□□□□ 0.19
Tnf-202ENSMUST00000167924 Dcaf1Q80TR8 1506 aa16.05■□□□□ 0.16
Tnf-202ENSMUST00000167924 Rtl1Q7M732 1744 aa15.99■□□□□ 0.15
Tnf-202ENSMUST00000167924 Gab3Q8BSM5 595 aa15.99■□□□□ 0.15
Tnf-202ENSMUST00000167924 Kdm5dQ62240 1548 aa15.88■□□□□ 0.13
Tnf-202ENSMUST00000167924 Rb1cc1Q9ESK9 1588 aa15.82■□□□□ 0.12
Tnf-202ENSMUST00000167924 NacadQ5SWP3 1504 aa15.78■□□□□ 0.12
Tnf-202ENSMUST00000167924 Ccdc180J3QNE4 1664 aa15.71■□□□□ 0.1
Tnf-202ENSMUST00000167924 Baz1aO88379 1555 aa15.63■□□□□ 0.09
Tnf-202ENSMUST00000167924 Plppr3Q7TPB0 716 aa15.59■□□□□ 0.09
Tnf-202ENSMUST00000167924 Zcchc6Q5BLK4 1491 aaKnown RBP15.44■□□□□ 0.06
Tnf-202ENSMUST00000167924 Sycp2Q9CUU3 1500 aa15.44■□□□□ 0.06
Tnf-202ENSMUST00000167924 Crybg2B7ZCC2 1516 aa15.38■□□□□ 0.05
Tnf-202ENSMUST00000167924 Smarca2Q6DIC0 1577 aa15.25■□□□□ 0.03
Tnf-202ENSMUST00000167924 Senp3Q9EP97 568 aaKnown RBP15.21■□□□□ 0.03
Tnf-202ENSMUST00000167924 BicraF8VPZ9 1578 aa15.14■□□□□ 0.01
Tnf-202ENSMUST00000167924 Ccdc136Q3TVA9 1136 aa15.1■□□□□ 0.01
Tnf-202ENSMUST00000167924 Fam163aQ8CAA5 168 aa15.07■□□□□ 0
Tnf-202ENSMUST00000167924 Cecr2E9Q2Z1 1453 aa14.9□□□□□ -0.02
Tnf-202ENSMUST00000167924 Trim41Q5NCC3 630 aa14.86□□□□□ -0.03
Tnf-202ENSMUST00000167924 Brd4Q9ESU6 1400 aaKnown RBP14.81□□□□□ -0.04
Tnf-202ENSMUST00000167924 Synj1Q8CHC4 1574 aa14.77□□□□□ -0.04
Tnf-202ENSMUST00000167924 HrcG5E8J6 738 aa14.76□□□□□ -0.05
Tnf-202ENSMUST00000167924 Smarca4Q3TKT4 1613 aaKnown RBP14.74□□□□□ -0.05
Tnf-202ENSMUST00000167924 Dnajc5bQ9CQ94 199 aa14.7□□□□□ -0.06
Tnf-202ENSMUST00000167924 Cttnbp2B9EJA2 1648 aa14.68□□□□□ -0.06
Tnf-202ENSMUST00000167924 CftrP26361 1476 aa14.67□□□□□ -0.06
Tnf-202ENSMUST00000167924 Golga3P55937 1487 aa14.58□□□□□ -0.08
Tnf-202ENSMUST00000167924 Iqgap2Q3UQ44 1575 aa14.56□□□□□ -0.08
Tnf-202ENSMUST00000167924 Atad2bE9Q166 1460 aaKnown RBP14.53□□□□□ -0.08
Tnf-202ENSMUST00000167924 Cngb1E1AZ71 1325 aa14.51□□□□□ -0.09
Tnf-202ENSMUST00000167924 Pds5bQ4VA53 1446 aaKnown RBP14.51□□□□□ -0.09
Tnf-202ENSMUST00000167924 Top2bQ64511 1612 aa14.51□□□□□ -0.09
Tnf-202ENSMUST00000167924 Cep164Q5DU05 1446 aa14.5□□□□□ -0.09
Tnf-202ENSMUST00000167924 Esf1Q3V1V3 845 aaKnown RBP14.44□□□□□ -0.1
Tnf-202ENSMUST00000167924 Rsf1E9PWW9 1441 aaKnown RBP14.43□□□□□ -0.1
Tnf-202ENSMUST00000167924 Cc2d2aQ8CFW7 1633 aa14.39□□□□□ -0.11
Tnf-202ENSMUST00000167924 Ccdc88bQ4QRL3 1481 aa14.38□□□□□ -0.11
Tnf-202ENSMUST00000167924 Wdr62Q3U3T8 1523 aa14.32□□□□□ -0.12
Tnf-202ENSMUST00000167924 Frmpd1A2AKB4 1549 aa14.28□□□□□ -0.12
Tnf-202ENSMUST00000167924 Ercc6F8VPZ5 1481 aa14.28□□□□□ -0.12
Tnf-202ENSMUST00000167924 Fmn1Q05860 1466 aa14.26□□□□□ -0.13
Tnf-202ENSMUST00000167924 Unc13aQ4KUS2 1712 aa14.2□□□□□ -0.14
Tnf-202ENSMUST00000167924 Thoc2B1AZI6 1594 aaKnown RBP14.19□□□□□ -0.14
Tnf-202ENSMUST00000167924 TnnQ80Z71 1560 aa14.18□□□□□ -0.14
Tnf-202ENSMUST00000167924 Top2aQ01320 1528 aaKnown RBP14.16□□□□□ -0.14
Tnf-202ENSMUST00000167924 Lamc3Q9R0B6 1581 aa14.1□□□□□ -0.15
Tnf-202ENSMUST00000167924 Ehmt2Q9Z148 1263 aaKnown RBP14.05□□□□□ -0.16
Tnf-202ENSMUST00000167924 Rapgef2Q8CHG7 1496 aa14.02□□□□□ -0.17
Tnf-202ENSMUST00000167924 Fam135aQ6NS59 1506 aa14□□□□□ -0.17
Tnf-202ENSMUST00000167924 Kif15Q6P9L6 1387 aa13.99□□□□□ -0.17
Tnf-202ENSMUST00000167924 Phldb1Q6PDH0 1371 aaKnown RBP13.99□□□□□ -0.17
Tnf-202ENSMUST00000167924 Camsap1A2AHC3 1581 aa13.95□□□□□ -0.18
Tnf-202ENSMUST00000167924 Rpgrip1Q9EPQ2 1331 aa13.9□□□□□ -0.18
Tnf-202ENSMUST00000167924 Acin1Q9JIX8 1338 aaKnown RBP13.9□□□□□ -0.18
Tnf-202ENSMUST00000167924 Eif4g1Q6NZJ6 1600 aaKnown RBP13.88□□□□□ -0.19
Tnf-202ENSMUST00000167924 Cep162Q6ZQ06 1403 aa13.88□□□□□ -0.19
Tnf-202ENSMUST00000167924 Ccdc18Q640L5 1455 aa13.85□□□□□ -0.19
Tnf-202ENSMUST00000167924 Cux2P70298 1426 aa13.83□□□□□ -0.2
Tnf-202ENSMUST00000167924 Ubl4bQ9CQ84 188 aa13.82□□□□□ -0.2
Tnf-202ENSMUST00000167924 Il27Q8K3I6 234 aa13.81□□□□□ -0.2
Tnf-202ENSMUST00000167924 Shroom4Q1W617 1475 aa13.81□□□□□ -0.2
Tnf-202ENSMUST00000167924 NrkQ9R0G8 1455 aa13.81□□□□□ -0.2
Tnf-202ENSMUST00000167924 Npm2Q80W85 207 aa13.8□□□□□ -0.2
Tnf-202ENSMUST00000167924 PtprkP35822 1457 aa13.8□□□□□ -0.2
Tnf-202ENSMUST00000167924 Grin2bQ01097 1482 aa13.8□□□□□ -0.2
Tnf-202ENSMUST00000167924 Arhgap35Q91YM2 1499 aa13.76□□□□□ -0.21
Tnf-202ENSMUST00000167924 Baz1bQ9Z277 1479 aa13.75□□□□□ -0.21
Tnf-202ENSMUST00000167924 Hoxd11P23813 323 aa13.73□□□□□ -0.21
Tnf-202ENSMUST00000167924 Dnajc5P60904 198 aa13.73□□□□□ -0.21
Tnf-202ENSMUST00000167924 Myt1lP97500 1187 aa13.72□□□□□ -0.21
Tnf-202ENSMUST00000167924 ArsiQ32KI9 573 aa13.69□□□□□ -0.22
Tnf-202ENSMUST00000167924 Npm1Q61937 292 aaKnown RBP13.69□□□□□ -0.22
Tnf-202ENSMUST00000167924 Map3k1P53349 1493 aa13.69□□□□□ -0.22
Tnf-202ENSMUST00000167924 Mrc2Q64449 1479 aa13.66□□□□□ -0.22
Tnf-202ENSMUST00000167924 PogzQ8BZH4 1409 aaKnown RBP13.66□□□□□ -0.22
Tnf-202ENSMUST00000167924 LrpprcQ6PB66 1392 aaKnown RBP13.66□□□□□ -0.22
Tnf-202ENSMUST00000167924 Kif21aQ9QXL2 1672 aa13.63□□□□□ -0.23
Tnf-202ENSMUST00000167924 Mroh2bQ7M6Y6 1581 aa13.63□□□□□ -0.23
Tnf-202ENSMUST00000167924 Duox2A2AQ99 1517 aa13.62□□□□□ -0.23
Tnf-202ENSMUST00000167924 GapdhsQ64467 440 aa13.61□□□□□ -0.23
Tnf-202ENSMUST00000167924 Efcab5A0JP43 1406 aa13.61□□□□□ -0.23
Tnf-202ENSMUST00000167924 AqrQ8CFQ3 1481 aaKnown RBP13.61□□□□□ -0.23
Tnf-202ENSMUST00000167924 Clip1Q922J3 1391 aa13.59□□□□□ -0.23
Tnf-202ENSMUST00000167924 Dhx29Q6PGC1 1365 aaKnown RBP13.58□□□□□ -0.24
Tnf-202ENSMUST00000167924 Samd9lQ69Z37 1561 aa13.58□□□□□ -0.24
Tnf-202ENSMUST00000167924 Crocc2F6XLV1 1638 aa13.57□□□□□ -0.24
Tnf-202ENSMUST00000167924 Zeb1Q64318 1117 aa13.56□□□□□ -0.24
Tnf-202ENSMUST00000167924 Erich3F6QRE9 1637 aa13.54□□□□□ -0.24
Tnf-202ENSMUST00000167924 SynmQ70IV5 1561 aa13.53□□□□□ -0.24
Tnf-202ENSMUST00000167924 Eea1Q8BL66 1411 aa13.53□□□□□ -0.24
Tnf-202ENSMUST00000167924 Ankrd26Q811D2 1581 aa13.53□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms