RNA–Protein interactions for RNA: ENSMUST00000165015.8

Trim13-202, Transcript of E3 ubiquitin-protein ligase TRIM13, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim13, Length 1,619 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13-202ENSMUST00000165015 Chic1Q8CBW7 227 aa21.58■■□□□ 1.05
Trim13-202ENSMUST00000165015 NischQ80TM9 1593 aa21.06■□□□□ 0.96
Trim13-202ENSMUST00000165015 Gm35339A0A140LHH9 1649 aa21.05■□□□□ 0.96
Trim13-202ENSMUST00000165015 Mapk8ip2Q9ERE9 830 aa20.62■□□□□ 0.89
Trim13-202ENSMUST00000165015 Abcc9P70170 1546 aa20.45■□□□□ 0.86
Trim13-202ENSMUST00000165015 Abcc8B2RUS7 1588 aa20.19■□□□□ 0.82
Trim13-202ENSMUST00000165015 Plppr3Q7TPB0 716 aa19.62■□□□□ 0.73
Trim13-202ENSMUST00000165015 Phf23Q8BSN5 401 aa19.52■□□□□ 0.72
Trim13-202ENSMUST00000165015 ScribQ80U72 1612 aa19.03■□□□□ 0.64
Trim13-202ENSMUST00000165015 Gab3Q8BSM5 595 aa19■□□□□ 0.63
Trim13-202ENSMUST00000165015 Dcaf1Q80TR8 1506 aa18.85■□□□□ 0.61
Trim13-202ENSMUST00000165015 Rhox8Q6VSS7 320 aa18.79■□□□□ 0.6
Trim13-202ENSMUST00000165015 NacadQ5SWP3 1504 aa18.6■□□□□ 0.57
Trim13-202ENSMUST00000165015 Kdm5dQ62240 1548 aa18.58■□□□□ 0.56
Trim13-202ENSMUST00000165015 Kcna4Q61423 654 aa18.57■□□□□ 0.56
Trim13-202ENSMUST00000165015 Rb1cc1Q9ESK9 1588 aa18.39■□□□□ 0.53
Trim13-202ENSMUST00000165015 Ccdc180J3QNE4 1664 aa18.31■□□□□ 0.52
Trim13-202ENSMUST00000165015 Senp3Q9EP97 568 aaKnown RBP18.27■□□□□ 0.51
Trim13-202ENSMUST00000165015 Baz1aO88379 1555 aa18.2■□□□□ 0.5
Trim13-202ENSMUST00000165015 Sycp2Q9CUU3 1500 aa18.19■□□□□ 0.5
Trim13-202ENSMUST00000165015 Rtl1Q7M732 1744 aa18.19■□□□□ 0.5
Trim13-202ENSMUST00000165015 Crybg2B7ZCC2 1516 aa18.12■□□□□ 0.49
Trim13-202ENSMUST00000165015 Zcchc6Q5BLK4 1491 aaKnown RBP17.8■□□□□ 0.44
Trim13-202ENSMUST00000165015 BicraF8VPZ9 1578 aa17.78■□□□□ 0.44
Trim13-202ENSMUST00000165015 Smarca2Q6DIC0 1577 aa17.73■□□□□ 0.43
Trim13-202ENSMUST00000165015 Ccdc136Q3TVA9 1136 aa17.47■□□□□ 0.39
Trim13-202ENSMUST00000165015 Cecr2E9Q2Z1 1453 aa17.38■□□□□ 0.37
Trim13-202ENSMUST00000165015 Trim41Q5NCC3 630 aa17.34■□□□□ 0.37
Trim13-202ENSMUST00000165015 Brd4Q9ESU6 1400 aaKnown RBP17.33■□□□□ 0.36
Trim13-202ENSMUST00000165015 Smarca4Q3TKT4 1613 aaKnown RBP17.27■□□□□ 0.35
Trim13-202ENSMUST00000165015 Pds5bQ4VA53 1446 aaKnown RBP17.24■□□□□ 0.35
Trim13-202ENSMUST00000165015 Atad2bE9Q166 1460 aaKnown RBP17.2■□□□□ 0.34
Trim13-202ENSMUST00000165015 CftrP26361 1476 aa17.15■□□□□ 0.34
Trim13-202ENSMUST00000165015 Ube2uB1AUC4 352 aa17.13■□□□□ 0.33
Trim13-202ENSMUST00000165015 Ppargc1bQ8VHJ7 1014 aa17.13■□□□□ 0.33
Trim13-202ENSMUST00000165015 Synj1Q8CHC4 1574 aa17.12■□□□□ 0.33
Trim13-202ENSMUST00000165015 Cttnbp2B9EJA2 1648 aa17.09■□□□□ 0.33
Trim13-202ENSMUST00000165015 Iqgap2Q3UQ44 1575 aa17.07■□□□□ 0.32
Trim13-202ENSMUST00000165015 HrcG5E8J6 738 aa17.01■□□□□ 0.31
Trim13-202ENSMUST00000165015 Golga3P55937 1487 aa16.92■□□□□ 0.3
Trim13-202ENSMUST00000165015 Esf1Q3V1V3 845 aaKnown RBP16.88■□□□□ 0.29
Trim13-202ENSMUST00000165015 Ercc6F8VPZ5 1481 aa16.87■□□□□ 0.29
Trim13-202ENSMUST00000165015 Wdr62Q3U3T8 1523 aa16.84■□□□□ 0.29
Trim13-202ENSMUST00000165015 Frmpd1A2AKB4 1549 aa16.81■□□□□ 0.28
Trim13-202ENSMUST00000165015 Thoc2B1AZI6 1594 aaKnown RBP16.79■□□□□ 0.28
Trim13-202ENSMUST00000165015 Cngb1E1AZ71 1325 aa16.78■□□□□ 0.28
Trim13-202ENSMUST00000165015 Top2bQ64511 1612 aa16.77■□□□□ 0.28
Trim13-202ENSMUST00000165015 Cep164Q5DU05 1446 aa16.65■□□□□ 0.26
Trim13-202ENSMUST00000165015 Dmrt2Q8BG36 561 aa16.64■□□□□ 0.25
Trim13-202ENSMUST00000165015 Phldb1Q6PDH0 1371 aaKnown RBP16.62■□□□□ 0.25
Trim13-202ENSMUST00000165015 Fmn1Q05860 1466 aa16.6■□□□□ 0.25
Trim13-202ENSMUST00000165015 Rsf1E9PWW9 1441 aaKnown RBP16.6■□□□□ 0.25
Trim13-202ENSMUST00000165015 Fam135aQ6NS59 1506 aa16.57■□□□□ 0.24
Trim13-202ENSMUST00000165015 Ccdc88bQ4QRL3 1481 aa16.56■□□□□ 0.24
Trim13-202ENSMUST00000165015 Cc2d2aQ8CFW7 1633 aa16.54■□□□□ 0.24
Trim13-202ENSMUST00000165015 Unc13aQ4KUS2 1712 aa16.52■□□□□ 0.24
Trim13-202ENSMUST00000165015 Baz1bQ9Z277 1479 aa16.51■□□□□ 0.23
Trim13-202ENSMUST00000165015 Lamc3Q9R0B6 1581 aa16.5■□□□□ 0.23
Trim13-202ENSMUST00000165015 TnnQ80Z71 1560 aa16.5■□□□□ 0.23
Trim13-202ENSMUST00000165015 Slc4a1apE9PX68 744 aa16.44■□□□□ 0.22
Trim13-202ENSMUST00000165015 Kif15Q6P9L6 1387 aa16.44■□□□□ 0.22
Trim13-202ENSMUST00000165015 Ubl4bQ9CQ84 188 aa16.41■□□□□ 0.22
Trim13-202ENSMUST00000165015 Top2aQ01320 1528 aaKnown RBP16.39■□□□□ 0.21
Trim13-202ENSMUST00000165015 Dnajc5bQ9CQ94 199 aa16.33■□□□□ 0.2
Trim13-202ENSMUST00000165015 Ccdc18Q640L5 1455 aa16.28■□□□□ 0.2
Trim13-202ENSMUST00000165015 Cux2P70298 1426 aa16.28■□□□□ 0.2
Trim13-202ENSMUST00000165015 Camsap1A2AHC3 1581 aa16.25■□□□□ 0.19
Trim13-202ENSMUST00000165015 Mrc2Q64449 1479 aa16.2■□□□□ 0.18
Trim13-202ENSMUST00000165015 Trap1aP19473 224 aa16.19■□□□□ 0.18
Trim13-202ENSMUST00000165015 Npm1Q61937 292 aaKnown RBP16.18■□□□□ 0.18
Trim13-202ENSMUST00000165015 Rapgef2Q8CHG7 1496 aa16.17■□□□□ 0.18
Trim13-202ENSMUST00000165015 NrkQ9R0G8 1455 aa16.14■□□□□ 0.17
Trim13-202ENSMUST00000165015 Il27Q8K3I6 234 aa16.14■□□□□ 0.17
Trim13-202ENSMUST00000165015 Grin2bQ01097 1482 aa16.12■□□□□ 0.17
Trim13-202ENSMUST00000165015 LrpprcQ6PB66 1392 aaKnown RBP16.1■□□□□ 0.17
Trim13-202ENSMUST00000165015 Shroom4Q1W617 1475 aa16.05■□□□□ 0.16
Trim13-202ENSMUST00000165015 PogzQ8BZH4 1409 aaKnown RBP16.05■□□□□ 0.16
Trim13-202ENSMUST00000165015 Efcab5A0JP43 1406 aa16.03■□□□□ 0.16
Trim13-202ENSMUST00000165015 Cep162Q6ZQ06 1403 aa16.03■□□□□ 0.16
Trim13-202ENSMUST00000165015 Npm2Q80W85 207 aa16.02■□□□□ 0.16
Trim13-202ENSMUST00000165015 PtprkP35822 1457 aa16.01■□□□□ 0.15
Trim13-202ENSMUST00000165015 Dhx29Q6PGC1 1365 aaKnown RBP15.99■□□□□ 0.15
Trim13-202ENSMUST00000165015 Eif4g1Q6NZJ6 1600 aaKnown RBP15.97■□□□□ 0.15
Trim13-202ENSMUST00000165015 Duox2A2AQ99 1517 aa15.97■□□□□ 0.15
Trim13-202ENSMUST00000165015 Kif21aQ9QXL2 1672 aa15.95■□□□□ 0.14
Trim13-202ENSMUST00000165015 Map3k1P53349 1493 aa15.93■□□□□ 0.14
Trim13-202ENSMUST00000165015 Arhgap35Q91YM2 1499 aa15.92■□□□□ 0.14
Trim13-202ENSMUST00000165015 Crocc2F6XLV1 1638 aa15.89■□□□□ 0.13
Trim13-202ENSMUST00000165015 Mroh2bQ7M6Y6 1581 aa15.88■□□□□ 0.13
Trim13-202ENSMUST00000165015 Fam71e1A1L3C1 212 aa15.85■□□□□ 0.13
Trim13-202ENSMUST00000165015 AqrQ8CFQ3 1481 aaKnown RBP15.82■□□□□ 0.12
Trim13-202ENSMUST00000165015 Myt1lP97500 1187 aa15.82■□□□□ 0.12
Trim13-202ENSMUST00000165015 Samd9lQ69Z37 1561 aa15.8■□□□□ 0.12
Trim13-202ENSMUST00000165015 Zeb1Q64318 1117 aa15.8■□□□□ 0.12
Trim13-202ENSMUST00000165015 Clip1Q922J3 1391 aa15.8■□□□□ 0.12
Trim13-202ENSMUST00000165015 Plb1Q3TTY0 1478 aa15.79■□□□□ 0.12
Trim13-202ENSMUST00000165015 SynmQ70IV5 1561 aa15.77■□□□□ 0.12
Trim13-202ENSMUST00000165015 Urb2E9Q7L1 1524 aaKnown RBP15.77■□□□□ 0.12
Trim13-202ENSMUST00000165015 Carmil1Q6EDY6 1374 aa15.77■□□□□ 0.11
Trim13-202ENSMUST00000165015 Ift140E9PY46 1464 aa15.74■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 193.9 ms