RNA–Protein interactions for RNA: ENSMUST00000164071.1

Tro-208, Transcript of Tro protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Tro, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-208ENSMUST00000164071 Gm35339A0A140LHH9 1649 aa25.62■■□□□ 1.69
Tro-208ENSMUST00000164071 NischQ80TM9 1593 aa25.29■■□□□ 1.64
Tro-208ENSMUST00000164071 Abcc9P70170 1546 aa24.51■■□□□ 1.51
Tro-208ENSMUST00000164071 Abcc8B2RUS7 1588 aa24.46■■□□□ 1.51
Tro-208ENSMUST00000164071 ScribQ80U72 1612 aa23.52■■□□□ 1.36
Tro-208ENSMUST00000164071 NacadQ5SWP3 1504 aa22.8■■□□□ 1.24
Tro-208ENSMUST00000164071 Kdm5dQ62240 1548 aa22.76■■□□□ 1.23
Tro-208ENSMUST00000164071 Dcaf1Q80TR8 1506 aa22.57■■□□□ 1.2
Tro-208ENSMUST00000164071 Sycp2Q9CUU3 1500 aa22.36■■□□□ 1.17
Tro-208ENSMUST00000164071 Rb1cc1Q9ESK9 1588 aa22.04■■□□□ 1.12
Tro-208ENSMUST00000164071 BicraF8VPZ9 1578 aa22.02■■□□□ 1.12
Tro-208ENSMUST00000164071 Rhox8Q6VSS7 320 aa21.85■■□□□ 1.09
Tro-208ENSMUST00000164071 Ccdc180J3QNE4 1664 aa21.79■■□□□ 1.08
Tro-208ENSMUST00000164071 Baz1aO88379 1555 aa21.76■■□□□ 1.07
Tro-208ENSMUST00000164071 Crybg2B7ZCC2 1516 aa21.73■■□□□ 1.07
Tro-208ENSMUST00000164071 Pds5bQ4VA53 1446 aaKnown RBP21.39■■□□□ 1.02
Tro-208ENSMUST00000164071 Zcchc6Q5BLK4 1491 aaKnown RBP21.38■■□□□ 1.01
Tro-208ENSMUST00000164071 Dnajc5bQ9CQ94 199 aa21.27■■□□□ 1
Tro-208ENSMUST00000164071 Atad2bE9Q166 1460 aaKnown RBP21.21■□□□□ 0.99
Tro-208ENSMUST00000164071 Thoc2B1AZI6 1594 aaKnown RBP21.19■□□□□ 0.98
Tro-208ENSMUST00000164071 Smarca2Q6DIC0 1577 aa21.14■□□□□ 0.97
Tro-208ENSMUST00000164071 Smarca4Q3TKT4 1613 aaKnown RBP21.05■□□□□ 0.96
Tro-208ENSMUST00000164071 Cecr2E9Q2Z1 1453 aa21.03■□□□□ 0.96
Tro-208ENSMUST00000164071 Iqgap2Q3UQ44 1575 aa20.92■□□□□ 0.94
Tro-208ENSMUST00000164071 Ercc6F8VPZ5 1481 aa20.9■□□□□ 0.94
Tro-208ENSMUST00000164071 Rtl1Q7M732 1744 aa20.81■□□□□ 0.92
Tro-208ENSMUST00000164071 Cc2d2aQ8CFW7 1633 aa20.81■□□□□ 0.92
Tro-208ENSMUST00000164071 Wdr62Q3U3T8 1523 aa20.75■□□□□ 0.91
Tro-208ENSMUST00000164071 Fam135aQ6NS59 1506 aa20.73■□□□□ 0.91
Tro-208ENSMUST00000164071 Frmpd1A2AKB4 1549 aa20.72■□□□□ 0.91
Tro-208ENSMUST00000164071 Phldb1Q6PDH0 1371 aaKnown RBP20.59■□□□□ 0.89
Tro-208ENSMUST00000164071 CftrP26361 1476 aa20.59■□□□□ 0.89
Tro-208ENSMUST00000164071 Baz1bQ9Z277 1479 aa20.54■□□□□ 0.88
Tro-208ENSMUST00000164071 Brd4Q9ESU6 1400 aaKnown RBP20.53■□□□□ 0.88
Tro-208ENSMUST00000164071 Cttnbp2B9EJA2 1648 aa20.53■□□□□ 0.88
Tro-208ENSMUST00000164071 Synj1Q8CHC4 1574 aa20.52■□□□□ 0.88
Tro-208ENSMUST00000164071 Ccdc136Q3TVA9 1136 aa20.45■□□□□ 0.86
Tro-208ENSMUST00000164071 Unc13aQ4KUS2 1712 aa20.41■□□□□ 0.86
Tro-208ENSMUST00000164071 Ubl4bQ9CQ84 188 aa20.36■□□□□ 0.85
Tro-208ENSMUST00000164071 Chic1Q8CBW7 227 aa20.24■□□□□ 0.83
Tro-208ENSMUST00000164071 Mrc2Q64449 1479 aa20.22■□□□□ 0.83
Tro-208ENSMUST00000164071 Trim41Q5NCC3 630 aa20.2■□□□□ 0.82
Tro-208ENSMUST00000164071 Esf1Q3V1V3 845 aaKnown RBP20.14■□□□□ 0.81
Tro-208ENSMUST00000164071 Rsf1E9PWW9 1441 aaKnown RBP20.04■□□□□ 0.8
Tro-208ENSMUST00000164071 Kif15Q6P9L6 1387 aa19.98■□□□□ 0.79
Tro-208ENSMUST00000164071 Lamc3Q9R0B6 1581 aa19.95■□□□□ 0.78
Tro-208ENSMUST00000164071 Cux2P70298 1426 aa19.95■□□□□ 0.78
Tro-208ENSMUST00000164071 Golga3P55937 1487 aa19.85■□□□□ 0.77
Tro-208ENSMUST00000164071 Top2bQ64511 1612 aa19.82■□□□□ 0.76
Tro-208ENSMUST00000164071 TnnQ80Z71 1560 aa19.77■□□□□ 0.76
Tro-208ENSMUST00000164071 Kif21aQ9QXL2 1672 aa19.76■□□□□ 0.75
Tro-208ENSMUST00000164071 Lrriq1Q0P5X1 1673 aa19.74■□□□□ 0.75
Tro-208ENSMUST00000164071 Npm1Q61937 292 aaKnown RBP19.73■□□□□ 0.75
Tro-208ENSMUST00000164071 Cep164Q5DU05 1446 aa19.69■□□□□ 0.74
Tro-208ENSMUST00000164071 Cngb1E1AZ71 1325 aa19.68■□□□□ 0.74
Tro-208ENSMUST00000164071 Ccdc18Q640L5 1455 aa19.63■□□□□ 0.73
Tro-208ENSMUST00000164071 Fmn1Q05860 1466 aa19.61■□□□□ 0.73
Tro-208ENSMUST00000164071 Camsap1A2AHC3 1581 aa19.6■□□□□ 0.73
Tro-208ENSMUST00000164071 Dhx29Q6PGC1 1365 aaKnown RBP19.56■□□□□ 0.72
Tro-208ENSMUST00000164071 LrpprcQ6PB66 1392 aaKnown RBP19.55■□□□□ 0.72
Tro-208ENSMUST00000164071 Il27Q8K3I6 234 aa19.51■□□□□ 0.71
Tro-208ENSMUST00000164071 Urb2E9Q7L1 1524 aaKnown RBP19.49■□□□□ 0.71
Tro-208ENSMUST00000164071 Eif4g3Q80XI3 1579 aaKnown RBP19.48■□□□□ 0.71
Tro-208ENSMUST00000164071 Plb1Q3TTY0 1478 aa19.47■□□□□ 0.71
Tro-208ENSMUST00000164071 PogzQ8BZH4 1409 aaKnown RBP19.45■□□□□ 0.7
Tro-208ENSMUST00000164071 Crocc2F6XLV1 1638 aa19.43■□□□□ 0.7
Tro-208ENSMUST00000164071 Grin2bQ01097 1482 aa19.35■□□□□ 0.69
Tro-208ENSMUST00000164071 Duox2A2AQ99 1517 aa19.34■□□□□ 0.69
Tro-208ENSMUST00000164071 Ccdc88bQ4QRL3 1481 aa19.33■□□□□ 0.68
Tro-208ENSMUST00000164071 Ift140E9PY46 1464 aa19.32■□□□□ 0.68
Tro-208ENSMUST00000164071 Top2aQ01320 1528 aaKnown RBP19.25■□□□□ 0.67
Tro-208ENSMUST00000164071 Efcab5A0JP43 1406 aa19.25■□□□□ 0.67
Tro-208ENSMUST00000164071 Shroom2A2ALU4 1481 aa19.22■□□□□ 0.67
Tro-208ENSMUST00000164071 Rusc2Q80U22 1514 aa19.21■□□□□ 0.67
Tro-208ENSMUST00000164071 Mapk8ip2Q9ERE9 830 aa19.21■□□□□ 0.67
Tro-208ENSMUST00000164071 Disp1Q3TDN0 1521 aa19.2■□□□□ 0.66
Tro-208ENSMUST00000164071 Samd9lQ69Z37 1561 aa19.19■□□□□ 0.66
Tro-208ENSMUST00000164071 NrkQ9R0G8 1455 aa19.18■□□□□ 0.66
Tro-208ENSMUST00000164071 Dnajc5P60904 198 aa19.16■□□□□ 0.66
Tro-208ENSMUST00000164071 Nup160Q9Z0W3 1402 aaKnown RBP19.13■□□□□ 0.65
Tro-208ENSMUST00000164071 Pbrm1Q8BSQ9 1634 aaKnown RBP19.11■□□□□ 0.65
Tro-208ENSMUST00000164071 Cc2d2bA0A286YDU8 1405 aa19.08■□□□□ 0.65
Tro-208ENSMUST00000164071 Setd1bQ8CFT2 1985 aa19.08■□□□□ 0.65
Tro-208ENSMUST00000164071 Shroom4Q1W617 1475 aa19.07■□□□□ 0.64
Tro-208ENSMUST00000164071 PtprkP35822 1457 aa19.05■□□□□ 0.64
Tro-208ENSMUST00000164071 Rad54l2Q99NG0 1466 aa19.03■□□□□ 0.64
Tro-208ENSMUST00000164071 Magi3Q9EQJ9 1476 aa19.02■□□□□ 0.63
Tro-208ENSMUST00000164071 Pabpn1Q8CCS6 302 aaKnown RBP19■□□□□ 0.63
Tro-208ENSMUST00000164071 Grin2aP35436 1464 aa19■□□□□ 0.63
Tro-208ENSMUST00000164071 Gpatch8A2A6A1 1505 aa18.95■□□□□ 0.62
Tro-208ENSMUST00000164071 AqrQ8CFQ3 1481 aaKnown RBP18.94■□□□□ 0.62
Tro-208ENSMUST00000164071 SynmQ70IV5 1561 aa18.93■□□□□ 0.62
Tro-208ENSMUST00000164071 Col17a1Q07563 1470 aa18.92■□□□□ 0.62
Tro-208ENSMUST00000164071 Pla2r1Q62028 1487 aa18.91■□□□□ 0.62
Tro-208ENSMUST00000164071 HrcG5E8J6 738 aa18.91■□□□□ 0.62
Tro-208ENSMUST00000164071 Fgd6Q69ZL1 1399 aa18.85■□□□□ 0.61
Tro-208ENSMUST00000164071 Pelp1Q9DBD5 1123 aaKnown RBP18.85■□□□□ 0.61
Tro-208ENSMUST00000164071 Mroh2bQ7M6Y6 1581 aa18.83■□□□□ 0.6
Tro-208ENSMUST00000164071 Zeb1Q64318 1117 aa18.78■□□□□ 0.6
Tro-208ENSMUST00000164071 Zcchc11B2RX14 1644 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 85.5 ms