RNA–Protein interactions for RNA: ENSMUST00000163969.7

Tro-207, Transcript of Tro protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Tro, Length 2,644 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-207ENSMUST00000163969 NischQ80TM9 1593 aa16.98■□□□□ 0.31
Tro-207ENSMUST00000163969 Abcc9P70170 1546 aa16.41■□□□□ 0.22
Tro-207ENSMUST00000163969 Gm35339A0A140LHH9 1649 aa16.38■□□□□ 0.21
Tro-207ENSMUST00000163969 Rhox8Q6VSS7 320 aa16.22■□□□□ 0.19
Tro-207ENSMUST00000163969 Abcc8B2RUS7 1588 aa16.05■□□□□ 0.16
Tro-207ENSMUST00000163969 Rtl1Q7M732 1744 aa15.48■□□□□ 0.07
Tro-207ENSMUST00000163969 Ccdc180J3QNE4 1664 aa15.37■□□□□ 0.05
Tro-207ENSMUST00000163969 Zcchc6Q5BLK4 1491 aaKnown RBP15.13■□□□□ 0.01
Tro-207ENSMUST00000163969 Ccdc136Q3TVA9 1136 aa15.08■□□□□ 0
Tro-207ENSMUST00000163969 Ehmt2Q9Z148 1263 aaKnown RBP15.01□□□□□ -0.01
Tro-207ENSMUST00000163969 ScribQ80U72 1612 aa14.92□□□□□ -0.02
Tro-207ENSMUST00000163969 Rb1cc1Q9ESK9 1588 aa14.88□□□□□ -0.03
Tro-207ENSMUST00000163969 Chic1Q8CBW7 227 aa14.86□□□□□ -0.03
Tro-207ENSMUST00000163969 Dcaf1Q80TR8 1506 aa14.81□□□□□ -0.04
Tro-207ENSMUST00000163969 Rpgrip1Q9EPQ2 1331 aa14.79□□□□□ -0.04
Tro-207ENSMUST00000163969 HrcG5E8J6 738 aa14.76□□□□□ -0.05
Tro-207ENSMUST00000163969 Acin1Q9JIX8 1338 aaKnown RBP14.72□□□□□ -0.05
Tro-207ENSMUST00000163969 Kdm5dQ62240 1548 aa14.7□□□□□ -0.06
Tro-207ENSMUST00000163969 Ube2uB1AUC4 352 aa14.66□□□□□ -0.06
Tro-207ENSMUST00000163969 Trim41Q5NCC3 630 aa14.66□□□□□ -0.06
Tro-207ENSMUST00000163969 Baz1aO88379 1555 aa14.65□□□□□ -0.06
Tro-207ENSMUST00000163969 NacadQ5SWP3 1504 aa14.5□□□□□ -0.09
Tro-207ENSMUST00000163969 DiexfQ8BTT6 772 aaKnown RBP14.4□□□□□ -0.1
Tro-207ENSMUST00000163969 Cngb1E1AZ71 1325 aa14.36□□□□□ -0.11
Tro-207ENSMUST00000163969 Gab3Q8BSM5 595 aa14.33□□□□□ -0.11
Tro-207ENSMUST00000163969 Smarca2Q6DIC0 1577 aa14.33□□□□□ -0.12
Tro-207ENSMUST00000163969 Pcgf6Q99NA9 353 aa14.28□□□□□ -0.12
Tro-207ENSMUST00000163969 Cep164Q5DU05 1446 aa14.28□□□□□ -0.12
Tro-207ENSMUST00000163969 Crybg2B7ZCC2 1516 aa14.22□□□□□ -0.13
Tro-207ENSMUST00000163969 Sycp2Q9CUU3 1500 aa14.19□□□□□ -0.14
Tro-207ENSMUST00000163969 Rsf1E9PWW9 1441 aaKnown RBP14.18□□□□□ -0.14
Tro-207ENSMUST00000163969 Cecr2E9Q2Z1 1453 aa14.15□□□□□ -0.14
Tro-207ENSMUST00000163969 Supt5hO55201 1082 aaKnown RBP14.1□□□□□ -0.15
Tro-207ENSMUST00000163969 Ccdc88bQ4QRL3 1481 aa14.08□□□□□ -0.16
Tro-207ENSMUST00000163969 Esf1Q3V1V3 845 aaKnown RBP14.07□□□□□ -0.16
Tro-207ENSMUST00000163969 Brd4Q9ESU6 1400 aaKnown RBP14.05□□□□□ -0.16
Tro-207ENSMUST00000163969 Zeb1Q64318 1117 aa13.99□□□□□ -0.17
Tro-207ENSMUST00000163969 Synj1Q8CHC4 1574 aa13.98□□□□□ -0.17
Tro-207ENSMUST00000163969 Golga3P55937 1487 aa13.98□□□□□ -0.17
Tro-207ENSMUST00000163969 CatipB9EKE5 520 aa13.96□□□□□ -0.17
Tro-207ENSMUST00000163969 Mier1Q5UAK0 511 aa13.94□□□□□ -0.18
Tro-207ENSMUST00000163969 BicraF8VPZ9 1578 aa13.9□□□□□ -0.18
Tro-207ENSMUST00000163969 CftrP26361 1476 aa13.85□□□□□ -0.19
Tro-207ENSMUST00000163969 UbtfP25976 765 aaKnown RBP13.8□□□□□ -0.2
Tro-207ENSMUST00000163969 Myt1lP97500 1187 aa13.77□□□□□ -0.21
Tro-207ENSMUST00000163969 NefmP08553 848 aa13.76□□□□□ -0.21
Tro-207ENSMUST00000163969 Neurod1Q60867 357 aa13.73□□□□□ -0.21
Tro-207ENSMUST00000163969 Sall2Q9QX96 1004 aa13.71□□□□□ -0.22
Tro-207ENSMUST00000163969 Top2bQ64511 1612 aa13.7□□□□□ -0.22
Tro-207ENSMUST00000163969 Plppr3Q7TPB0 716 aa13.69□□□□□ -0.22
Tro-207ENSMUST00000163969 Ttbk1Q6PCN3 1308 aa13.69□□□□□ -0.22
Tro-207ENSMUST00000163969 Cc2d2aQ8CFW7 1633 aa13.69□□□□□ -0.22
Tro-207ENSMUST00000163969 Cttnbp2B9EJA2 1648 aa13.66□□□□□ -0.22
Tro-207ENSMUST00000163969 Npm2Q80W85 207 aa13.62□□□□□ -0.23
Tro-207ENSMUST00000163969 Ppargc1bQ8VHJ7 1014 aa13.61□□□□□ -0.23
Tro-207ENSMUST00000163969 Smarca4Q3TKT4 1613 aaKnown RBP13.6□□□□□ -0.23
Tro-207ENSMUST00000163969 Mapk8ip2Q9ERE9 830 aa13.59□□□□□ -0.23
Tro-207ENSMUST00000163969 Rapgef2Q8CHG7 1496 aa13.58□□□□□ -0.24
Tro-207ENSMUST00000163969 Wdr66E9Q743 1299 aa13.58□□□□□ -0.24
Tro-207ENSMUST00000163969 Phf23Q8BSN5 401 aa13.58□□□□□ -0.24
Tro-207ENSMUST00000163969 Aebp2Q9Z248 504 aaKnown RBP13.57□□□□□ -0.24
Tro-207ENSMUST00000163969 Plekhg3Q4VAC9 1341 aa13.54□□□□□ -0.24
Tro-207ENSMUST00000163969 Cep162Q6ZQ06 1403 aa13.53□□□□□ -0.24
Tro-207ENSMUST00000163969 Fmn1Q05860 1466 aa13.53□□□□□ -0.24
Tro-207ENSMUST00000163969 Top2aQ01320 1528 aaKnown RBP13.5□□□□□ -0.25
Tro-207ENSMUST00000163969 Las1lA2BE28 776 aaKnown RBP13.49□□□□□ -0.25
Tro-207ENSMUST00000163969 Il27Q8K3I6 234 aa13.45□□□□□ -0.26
Tro-207ENSMUST00000163969 Iqgap2Q3UQ44 1575 aa13.44□□□□□ -0.26
Tro-207ENSMUST00000163969 Clip1Q922J3 1391 aa13.44□□□□□ -0.26
Tro-207ENSMUST00000163969 Ap3b1Q9Z1T1 1105 aa13.43□□□□□ -0.26
Tro-207ENSMUST00000163969 TonslQ6NZL6 1363 aa13.35□□□□□ -0.27
Tro-207ENSMUST00000163969 ClspnQ80YR7 1315 aa13.32□□□□□ -0.28
Tro-207ENSMUST00000163969 Atad2bE9Q166 1460 aaKnown RBP13.31□□□□□ -0.28
Tro-207ENSMUST00000163969 PtprkP35822 1457 aa13.31□□□□□ -0.28
Tro-207ENSMUST00000163969 Eid3Q3V124 375 aa13.3□□□□□ -0.28
Tro-207ENSMUST00000163969 Csrnp3P59055 597 aa13.3□□□□□ -0.28
Tro-207ENSMUST00000163969 Nop58Q6DFW4 536 aaKnown RBP13.28□□□□□ -0.28
Tro-207ENSMUST00000163969 Anks4bQ8K3X6 423 aa13.28□□□□□ -0.28
Tro-207ENSMUST00000163969 ArxO35085 564 aa13.27□□□□□ -0.29
Tro-207ENSMUST00000163969 Cdk11bP24788 784 aaKnown RBP13.26□□□□□ -0.29
Tro-207ENSMUST00000163969 Arhgap35Q91YM2 1499 aa13.25□□□□□ -0.29
Tro-207ENSMUST00000163969 Eif4g1Q6NZJ6 1600 aaKnown RBP13.24□□□□□ -0.29
Tro-207ENSMUST00000163969 Kcna4Q61423 654 aa13.23□□□□□ -0.29
Tro-207ENSMUST00000163969 Ncapd3Q6ZQK0 1506 aa13.23□□□□□ -0.29
Tro-207ENSMUST00000163969 Myt1Q8CFC2 1127 aa13.22□□□□□ -0.29
Tro-207ENSMUST00000163969 Kif15Q6P9L6 1387 aa13.22□□□□□ -0.29
Tro-207ENSMUST00000163969 Pds5bQ4VA53 1446 aaKnown RBP13.21□□□□□ -0.29
Tro-207ENSMUST00000163969 Amer1Q7TS75 1132 aa13.21□□□□□ -0.29
Tro-207ENSMUST00000163969 Frmpd1A2AKB4 1549 aa13.2□□□□□ -0.3
Tro-207ENSMUST00000163969 1700123L14RikQ3V2K7 440 aa13.2□□□□□ -0.3
Tro-207ENSMUST00000163969 Arap1Q4LDD4 1452 aa13.2□□□□□ -0.3
Tro-207ENSMUST00000163969 Setd5Q5XJV7 1441 aa13.19□□□□□ -0.3
Tro-207ENSMUST00000163969 TnnQ80Z71 1560 aa13.18□□□□□ -0.3
Tro-207ENSMUST00000163969 Eea1Q8BL66 1411 aa13.18□□□□□ -0.3
Tro-207ENSMUST00000163969 Gm38655A0A286YDK6 273 aa13.13□□□□□ -0.31
Tro-207ENSMUST00000163969 Lmod2Q3UHZ5 550 aa13.13□□□□□ -0.31
Tro-207ENSMUST00000163969 NrkQ9R0G8 1455 aa13.13□□□□□ -0.31
Tro-207ENSMUST00000163969 Wdr62Q3U3T8 1523 aa13.12□□□□□ -0.31
Tro-207ENSMUST00000163969 Fam50aQ9WV03 339 aaKnown RBP13.1□□□□□ -0.31
Tro-207ENSMUST00000163969 Shroom4Q1W617 1475 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 82.3 ms