RNA–Protein interactions for RNA: ENSMUST00000163255.8

Trim43c-201, Transcript of Tripartite motif-containing protein 43C, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim43c, Length 1,990 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43c-201ENSMUST00000163255 Rpgrip1Q9EPQ2 1331 aa13.16□□□□□ -0.3
Trim43c-201ENSMUST00000163255 Rtl1Q7M732 1744 aa13.05□□□□□ -0.32
Trim43c-201ENSMUST00000163255 NischQ80TM9 1593 aa13.03□□□□□ -0.32
Trim43c-201ENSMUST00000163255 Ccdc180J3QNE4 1664 aa12.85□□□□□ -0.35
Trim43c-201ENSMUST00000163255 Abcc9P70170 1546 aa12.68□□□□□ -0.38
Trim43c-201ENSMUST00000163255 Gm35339A0A140LHH9 1649 aa12.61□□□□□ -0.39
Trim43c-201ENSMUST00000163255 Acin1Q9JIX8 1338 aaKnown RBP12.59□□□□□ -0.39
Trim43c-201ENSMUST00000163255 Rhox8Q6VSS7 320 aa12.57□□□□□ -0.4
Trim43c-201ENSMUST00000163255 Ube2uB1AUC4 352 aa12.41□□□□□ -0.42
Trim43c-201ENSMUST00000163255 Pcgf6Q99NA9 353 aa12.33□□□□□ -0.44
Trim43c-201ENSMUST00000163255 Chic1Q8CBW7 227 aa12.31□□□□□ -0.44
Trim43c-201ENSMUST00000163255 Dcaf1Q80TR8 1506 aa12.22□□□□□ -0.45
Trim43c-201ENSMUST00000163255 Abcc8B2RUS7 1588 aa12.21□□□□□ -0.46
Trim43c-201ENSMUST00000163255 Zcchc6Q5BLK4 1491 aaKnown RBP12.2□□□□□ -0.46
Trim43c-201ENSMUST00000163255 Ehmt2Q9Z148 1263 aaKnown RBP12.09□□□□□ -0.47
Trim43c-201ENSMUST00000163255 HrcG5E8J6 738 aa12.07□□□□□ -0.48
Trim43c-201ENSMUST00000163255 Las1lA2BE28 776 aaKnown RBP12□□□□□ -0.49
Trim43c-201ENSMUST00000163255 Trim41Q5NCC3 630 aa11.98□□□□□ -0.49
Trim43c-201ENSMUST00000163255 Supt5hO55201 1082 aaKnown RBP11.93□□□□□ -0.5
Trim43c-201ENSMUST00000163255 Neurod1Q60867 357 aa11.87□□□□□ -0.51
Trim43c-201ENSMUST00000163255 Myt1Q8CFC2 1127 aa11.77□□□□□ -0.53
Trim43c-201ENSMUST00000163255 CenpbP27790 599 aa11.63□□□□□ -0.55
Trim43c-201ENSMUST00000163255 Cngb1E1AZ71 1325 aa11.62□□□□□ -0.55
Trim43c-201ENSMUST00000163255 Anks4bQ8K3X6 423 aa11.62□□□□□ -0.55
Trim43c-201ENSMUST00000163255 NefmP08553 848 aa11.61□□□□□ -0.55
Trim43c-201ENSMUST00000163255 1700123L14RikQ3V2K7 440 aa11.59□□□□□ -0.55
Trim43c-201ENSMUST00000163255 Zeb1Q64318 1117 aa11.58□□□□□ -0.56
Trim43c-201ENSMUST00000163255 Cep164Q5DU05 1446 aa11.55□□□□□ -0.56
Trim43c-201ENSMUST00000163255 Ccdc136Q3TVA9 1136 aa11.54□□□□□ -0.56
Trim43c-201ENSMUST00000163255 Mapk8ip2Q9ERE9 830 aa11.54□□□□□ -0.56
Trim43c-201ENSMUST00000163255 Csrnp3P59055 597 aa11.49□□□□□ -0.57
Trim43c-201ENSMUST00000163255 Aplp2Q06335 707 aa11.48□□□□□ -0.57
Trim43c-201ENSMUST00000163255 Rb1cc1Q9ESK9 1588 aa11.48□□□□□ -0.57
Trim43c-201ENSMUST00000163255 Sall2Q9QX96 1004 aa11.48□□□□□ -0.57
Trim43c-201ENSMUST00000163255 Mier1Q5UAK0 511 aa11.36□□□□□ -0.59
Trim43c-201ENSMUST00000163255 Baz1aO88379 1555 aa11.36□□□□□ -0.59
Trim43c-201ENSMUST00000163255 Cdk11bP24788 784 aaKnown RBP11.35□□□□□ -0.59
Trim43c-201ENSMUST00000163255 DiexfQ8BTT6 772 aaKnown RBP11.32□□□□□ -0.6
Trim43c-201ENSMUST00000163255 Nop58Q6DFW4 536 aaKnown RBP11.28□□□□□ -0.6
Trim43c-201ENSMUST00000163255 Wdr66E9Q743 1299 aa11.27□□□□□ -0.61
Trim43c-201ENSMUST00000163255 ClspnQ80YR7 1315 aa11.24□□□□□ -0.61
Trim43c-201ENSMUST00000163255 Kcna4Q61423 654 aa11.22□□□□□ -0.61
Trim43c-201ENSMUST00000163255 Plppr3Q7TPB0 716 aa11.2□□□□□ -0.62
Trim43c-201ENSMUST00000163255 Phf23Q8BSN5 401 aa11.16□□□□□ -0.62
Trim43c-201ENSMUST00000163255 Bcl11aQ9QYE3 773 aa11.16□□□□□ -0.62
Trim43c-201ENSMUST00000163255 Gab3Q8BSM5 595 aa11.14□□□□□ -0.63
Trim43c-201ENSMUST00000163255 Aebp2Q9Z248 504 aaKnown RBP11.14□□□□□ -0.63
Trim43c-201ENSMUST00000163255 Smarca2Q6DIC0 1577 aa11.13□□□□□ -0.63
Trim43c-201ENSMUST00000163255 Rsf1E9PWW9 1441 aaKnown RBP11.13□□□□□ -0.63
Trim43c-201ENSMUST00000163255 ScribQ80U72 1612 aa11.12□□□□□ -0.63
Trim43c-201ENSMUST00000163255 Gm38655A0A286YDK6 273 aa11.07□□□□□ -0.64
Trim43c-201ENSMUST00000163255 Tnnt3Q9QZ47 272 aa11.07□□□□□ -0.64
Trim43c-201ENSMUST00000163255 Crybg2B7ZCC2 1516 aa11.05□□□□□ -0.64
Trim43c-201ENSMUST00000163255 Kdm5dQ62240 1548 aa11.04□□□□□ -0.64
Trim43c-201ENSMUST00000163255 Fam71e1A1L3C1 212 aa11.01□□□□□ -0.65
Trim43c-201ENSMUST00000163255 TonslQ6NZL6 1363 aa11.01□□□□□ -0.65
Trim43c-201ENSMUST00000163255 Ppargc1bQ8VHJ7 1014 aa11□□□□□ -0.65
Trim43c-201ENSMUST00000163255 UbtfP25976 765 aaKnown RBP10.98□□□□□ -0.65
Trim43c-201ENSMUST00000163255 Ccdc88bQ4QRL3 1481 aa10.97□□□□□ -0.65
Trim43c-201ENSMUST00000163255 Rtl5Q5DTT4 599 aa10.95□□□□□ -0.66
Trim43c-201ENSMUST00000163255 Golga3P55937 1487 aa10.95□□□□□ -0.66
Trim43c-201ENSMUST00000163255 Brd4Q9ESU6 1400 aaKnown RBP10.92□□□□□ -0.66
Trim43c-201ENSMUST00000163255 NacadQ5SWP3 1504 aa10.92□□□□□ -0.66
Trim43c-201ENSMUST00000163255 Anp32aO35381 247 aa10.89□□□□□ -0.67
Trim43c-201ENSMUST00000163255 Hnrnpul2Q00PI9 745 aaKnown RBP10.88□□□□□ -0.67
Trim43c-201ENSMUST00000163255 Pelp1Q9DBD5 1123 aaKnown RBP10.87□□□□□ -0.67
Trim43c-201ENSMUST00000163255 SafbD3YXK2 937 aaKnown RBP10.85□□□□□ -0.67
Trim43c-201ENSMUST00000163255 Stra8P70278 393 aa10.81□□□□□ -0.68
Trim43c-201ENSMUST00000163255 Rapgef2Q8CHG7 1496 aa10.79□□□□□ -0.68
Trim43c-201ENSMUST00000163255 PrkcshO08795 521 aa10.77□□□□□ -0.68
Trim43c-201ENSMUST00000163255 Top2bQ64511 1612 aa10.77□□□□□ -0.68
Trim43c-201ENSMUST00000163255 Ttbk1Q6PCN3 1308 aa10.75□□□□□ -0.69
Trim43c-201ENSMUST00000163255 Ncapd3Q6ZQK0 1506 aa10.74□□□□□ -0.69
Trim43c-201ENSMUST00000163255 Synj1Q8CHC4 1574 aa10.73□□□□□ -0.69
Trim43c-201ENSMUST00000163255 Amer1Q7TS75 1132 aa10.72□□□□□ -0.69
Trim43c-201ENSMUST00000163255 Ifnlr1Q8CGK5 535 aa10.7□□□□□ -0.7
Trim43c-201ENSMUST00000163255 Ap3b1Q9Z1T1 1105 aa10.7□□□□□ -0.7
Trim43c-201ENSMUST00000163255 Cep162Q6ZQ06 1403 aa10.67□□□□□ -0.7
Trim43c-201ENSMUST00000163255 Znf710Q3U288 666 aa10.66□□□□□ -0.7
Trim43c-201ENSMUST00000163255 Esf1Q3V1V3 845 aaKnown RBP10.66□□□□□ -0.7
Trim43c-201ENSMUST00000163255 Cc2d2aQ8CFW7 1633 aa10.66□□□□□ -0.7
Trim43c-201ENSMUST00000163255 Calr4Q3TQS0 420 aa10.65□□□□□ -0.7
Trim43c-201ENSMUST00000163255 Cecr2E9Q2Z1 1453 aa10.65□□□□□ -0.7
Trim43c-201ENSMUST00000163255 Myt1lP97500 1187 aa10.64□□□□□ -0.71
Trim43c-201ENSMUST00000163255 Sycp2Q9CUU3 1500 aa10.64□□□□□ -0.71
Trim43c-201ENSMUST00000163255 Clip1Q922J3 1391 aa10.63□□□□□ -0.71
Trim43c-201ENSMUST00000163255 Nolc1E9Q5C9 702 aaKnown RBP10.63□□□□□ -0.71
Trim43c-201ENSMUST00000163255 Top2aQ01320 1528 aaKnown RBP10.61□□□□□ -0.71
Trim43c-201ENSMUST00000163255 ArxO35085 564 aa10.6□□□□□ -0.71
Trim43c-201ENSMUST00000163255 Supt16hQ920B9 1047 aa10.59□□□□□ -0.71
Trim43c-201ENSMUST00000163255 Rpap1Q80TE0 1409 aa10.59□□□□□ -0.71
Trim43c-201ENSMUST00000163255 CftrP26361 1476 aa10.59□□□□□ -0.71
Trim43c-201ENSMUST00000163255 Cttnbp2B9EJA2 1648 aa10.59□□□□□ -0.71
Trim43c-201ENSMUST00000163255 Fmn1Q05860 1466 aa10.59□□□□□ -0.71
Trim43c-201ENSMUST00000163255 Plekhg3Q4VAC9 1341 aa10.59□□□□□ -0.71
Trim43c-201ENSMUST00000163255 Kdm5bQ80Y84 1544 aa10.56□□□□□ -0.72
Trim43c-201ENSMUST00000163255 CatipB9EKE5 520 aa10.55□□□□□ -0.72
Trim43c-201ENSMUST00000163255 Ccdc9Q8VC31 543 aaKnown RBP10.54□□□□□ -0.72
Trim43c-201ENSMUST00000163255 Eif4g1Q6NZJ6 1600 aaKnown RBP10.53□□□□□ -0.72
Trim43c-201ENSMUST00000163255 Npm2Q80W85 207 aa10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 66.3 ms