RNA–Protein interactions for RNA: ENSMUST00000160218.1

Smim17-202, Transcript of MCG116182, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smim17, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17-202ENSMUST00000160218 Gm35339A0A140LHH9 1649 aa13.83□□□□□ -0.2
Smim17-202ENSMUST00000160218 NischQ80TM9 1593 aa13.75□□□□□ -0.21
Smim17-202ENSMUST00000160218 Mapk8ip2Q9ERE9 830 aa13.75□□□□□ -0.21
Smim17-202ENSMUST00000160218 Chic1Q8CBW7 227 aa13.5□□□□□ -0.25
Smim17-202ENSMUST00000160218 Abcc9P70170 1546 aa13.41□□□□□ -0.26
Smim17-202ENSMUST00000160218 Rpgrip1Q9EPQ2 1331 aa13.34□□□□□ -0.27
Smim17-202ENSMUST00000160218 Pcgf6Q99NA9 353 aa13.22□□□□□ -0.29
Smim17-202ENSMUST00000160218 Abcc8B2RUS7 1588 aa13.18□□□□□ -0.3
Smim17-202ENSMUST00000160218 Rhox8Q6VSS7 320 aa13.08□□□□□ -0.32
Smim17-202ENSMUST00000160218 Dnajc5P60904 198 aa12.92□□□□□ -0.34
Smim17-202ENSMUST00000160218 Rtl1Q7M732 1744 aa12.91□□□□□ -0.34
Smim17-202ENSMUST00000160218 Ehmt2Q9Z148 1263 aaKnown RBP12.91□□□□□ -0.34
Smim17-202ENSMUST00000160218 Acin1Q9JIX8 1338 aaKnown RBP12.9□□□□□ -0.34
Smim17-202ENSMUST00000160218 Ccdc180J3QNE4 1664 aa12.83□□□□□ -0.36
Smim17-202ENSMUST00000160218 Neurod1Q60867 357 aa12.82□□□□□ -0.36
Smim17-202ENSMUST00000160218 DiexfQ8BTT6 772 aaKnown RBP12.81□□□□□ -0.36
Smim17-202ENSMUST00000160218 Supt5hO55201 1082 aaKnown RBP12.69□□□□□ -0.38
Smim17-202ENSMUST00000160218 CenpbP27790 599 aa12.65□□□□□ -0.38
Smim17-202ENSMUST00000160218 1700123L14RikQ3V2K7 440 aa12.65□□□□□ -0.39
Smim17-202ENSMUST00000160218 Las1lA2BE28 776 aaKnown RBP12.64□□□□□ -0.39
Smim17-202ENSMUST00000160218 Bcl11aQ9QYE3 773 aa12.54□□□□□ -0.4
Smim17-202ENSMUST00000160218 Zcchc6Q5BLK4 1491 aaKnown RBP12.5□□□□□ -0.41
Smim17-202ENSMUST00000160218 Csrnp3P59055 597 aa12.48□□□□□ -0.41
Smim17-202ENSMUST00000160218 Baz1bQ9Z277 1479 aa12.48□□□□□ -0.41
Smim17-202ENSMUST00000160218 Ube2uB1AUC4 352 aa12.43□□□□□ -0.42
Smim17-202ENSMUST00000160218 Myt1Q8CFC2 1127 aa12.43□□□□□ -0.42
Smim17-202ENSMUST00000160218 ScribQ80U72 1612 aa12.4□□□□□ -0.42
Smim17-202ENSMUST00000160218 PrkcshO08795 521 aa12.4□□□□□ -0.42
Smim17-202ENSMUST00000160218 Dcaf1Q80TR8 1506 aa12.36□□□□□ -0.43
Smim17-202ENSMUST00000160218 Trim41Q5NCC3 630 aa12.34□□□□□ -0.43
Smim17-202ENSMUST00000160218 Gm38655A0A286YDK6 273 aa12.31□□□□□ -0.44
Smim17-202ENSMUST00000160218 Thoc2B1AZI6 1594 aaKnown RBP12.22□□□□□ -0.45
Smim17-202ENSMUST00000160218 Zeb1Q64318 1117 aa12.2□□□□□ -0.46
Smim17-202ENSMUST00000160218 HrcG5E8J6 738 aa12.19□□□□□ -0.46
Smim17-202ENSMUST00000160218 Amer1Q7TS75 1132 aa12.17□□□□□ -0.46
Smim17-202ENSMUST00000160218 Ifnlr1Q8CGK5 535 aa12.17□□□□□ -0.46
Smim17-202ENSMUST00000160218 Anks4bQ8K3X6 423 aa12.13□□□□□ -0.47
Smim17-202ENSMUST00000160218 Ccdc136Q3TVA9 1136 aa12.12□□□□□ -0.47
Smim17-202ENSMUST00000160218 Kdm5dQ62240 1548 aa12.08□□□□□ -0.48
Smim17-202ENSMUST00000160218 Cngb1E1AZ71 1325 aa12.08□□□□□ -0.48
Smim17-202ENSMUST00000160218 Cypt1Q8CH20 168 aa12.06□□□□□ -0.48
Smim17-202ENSMUST00000160218 Aplp2Q06335 707 aa12.06□□□□□ -0.48
Smim17-202ENSMUST00000160218 NacadQ5SWP3 1504 aa12.04□□□□□ -0.48
Smim17-202ENSMUST00000160218 Rb1cc1Q9ESK9 1588 aa12.03□□□□□ -0.48
Smim17-202ENSMUST00000160218 Dnajc5bQ9CQ94 199 aa12.01□□□□□ -0.49
Smim17-202ENSMUST00000160218 Sall2Q9QX96 1004 aa12□□□□□ -0.49
Smim17-202ENSMUST00000160218 Baz1aO88379 1555 aa11.92□□□□□ -0.5
Smim17-202ENSMUST00000160218 Fam71e1A1L3C1 212 aa11.92□□□□□ -0.5
Smim17-202ENSMUST00000160218 Plppr3Q7TPB0 716 aa11.86□□□□□ -0.51
Smim17-202ENSMUST00000160218 Crybg2B7ZCC2 1516 aa11.86□□□□□ -0.51
Smim17-202ENSMUST00000160218 Kcna4Q61423 654 aa11.85□□□□□ -0.51
Smim17-202ENSMUST00000160218 Sycp2Q9CUU3 1500 aa11.79□□□□□ -0.52
Smim17-202ENSMUST00000160218 Phf23Q8BSN5 401 aa11.79□□□□□ -0.52
Smim17-202ENSMUST00000160218 Ppargc1bQ8VHJ7 1014 aa11.79□□□□□ -0.52
Smim17-202ENSMUST00000160218 Cdk11bP24788 784 aaKnown RBP11.77□□□□□ -0.53
Smim17-202ENSMUST00000160218 Cep164Q5DU05 1446 aa11.75□□□□□ -0.53
Smim17-202ENSMUST00000160218 Nop58Q6DFW4 536 aaKnown RBP11.72□□□□□ -0.53
Smim17-202ENSMUST00000160218 Shroom2A2ALU4 1481 aa11.72□□□□□ -0.53
Smim17-202ENSMUST00000160218 Wdr66E9Q743 1299 aa11.71□□□□□ -0.53
Smim17-202ENSMUST00000160218 SafbD3YXK2 937 aaKnown RBP11.7□□□□□ -0.54
Smim17-202ENSMUST00000160218 Fam135aQ6NS59 1506 aa11.69□□□□□ -0.54
Smim17-202ENSMUST00000160218 Ttbk1Q6PCN3 1308 aa11.67□□□□□ -0.54
Smim17-202ENSMUST00000160218 Smarca2Q6DIC0 1577 aa11.66□□□□□ -0.54
Smim17-202ENSMUST00000160218 Gab3Q8BSM5 595 aa11.65□□□□□ -0.54
Smim17-202ENSMUST00000160218 Mier1Q5UAK0 511 aa11.64□□□□□ -0.55
Smim17-202ENSMUST00000160218 Hdac5Q9Z2V6 1113 aa11.64□□□□□ -0.55
Smim17-202ENSMUST00000160218 NefmP08553 848 aa11.61□□□□□ -0.55
Smim17-202ENSMUST00000160218 Pknox2Q8BG99 474 aa11.58□□□□□ -0.56
Smim17-202ENSMUST00000160218 Aebp2Q9Z248 504 aaKnown RBP11.57□□□□□ -0.56
Smim17-202ENSMUST00000160218 BicraF8VPZ9 1578 aa11.56□□□□□ -0.56
Smim17-202ENSMUST00000160218 Rsf1E9PWW9 1441 aaKnown RBP11.55□□□□□ -0.56
Smim17-202ENSMUST00000160218 Pds5bQ4VA53 1446 aaKnown RBP11.54□□□□□ -0.56
Smim17-202ENSMUST00000160218 Zcchc11B2RX14 1644 aaKnown RBP11.52□□□□□ -0.57
Smim17-202ENSMUST00000160218 Hnrnpul2Q00PI9 745 aaKnown RBP11.51□□□□□ -0.57
Smim17-202ENSMUST00000160218 Col17a1Q07563 1470 aa11.49□□□□□ -0.57
Smim17-202ENSMUST00000160218 Fgd1P52734 960 aa11.48□□□□□ -0.57
Smim17-202ENSMUST00000160218 Il27Q8K3I6 234 aa11.44□□□□□ -0.58
Smim17-202ENSMUST00000160218 Plcd4Q8K3R3 807 aa11.43□□□□□ -0.58
Smim17-202ENSMUST00000160218 Ccdc88bQ4QRL3 1481 aa11.43□□□□□ -0.58
Smim17-202ENSMUST00000160218 Cc2d2aQ8CFW7 1633 aa11.42□□□□□ -0.58
Smim17-202ENSMUST00000160218 NrdcQ8BHG1 1161 aa11.36□□□□□ -0.59
Smim17-202ENSMUST00000160218 UbtfP25976 765 aaKnown RBP11.36□□□□□ -0.59
Smim17-202ENSMUST00000160218 Ap3b1Q9Z1T1 1105 aa11.35□□□□□ -0.59
Smim17-202ENSMUST00000160218 ClspnQ80YR7 1315 aa11.34□□□□□ -0.59
Smim17-202ENSMUST00000160218 Gtf3c3Q3TMP1 882 aa11.33□□□□□ -0.6
Smim17-202ENSMUST00000160218 Cecr2E9Q2Z1 1453 aa11.32□□□□□ -0.6
Smim17-202ENSMUST00000160218 Anp32aO35381 247 aa11.31□□□□□ -0.6
Smim17-202ENSMUST00000160218 Brd4Q9ESU6 1400 aaKnown RBP11.29□□□□□ -0.6
Smim17-202ENSMUST00000160218 Nolc1E9Q5C9 702 aaKnown RBP11.27□□□□□ -0.61
Smim17-202ENSMUST00000160218 Golga3P55937 1487 aa11.25□□□□□ -0.61
Smim17-202ENSMUST00000160218 Rtl5Q5DTT4 599 aa11.23□□□□□ -0.61
Smim17-202ENSMUST00000160218 Smarca4Q3TKT4 1613 aaKnown RBP11.23□□□□□ -0.61
Smim17-202ENSMUST00000160218 Pelp1Q9DBD5 1123 aaKnown RBP11.22□□□□□ -0.61
Smim17-202ENSMUST00000160218 Synj1Q8CHC4 1574 aa11.22□□□□□ -0.61
Smim17-202ENSMUST00000160218 Tnnt3Q9QZ47 272 aa11.2□□□□□ -0.62
Smim17-202ENSMUST00000160218 Zfp777B9EKF4 885 aa11.19□□□□□ -0.62
Smim17-202ENSMUST00000160218 Cttnbp2B9EJA2 1648 aa11.19□□□□□ -0.62
Smim17-202ENSMUST00000160218 CftrP26361 1476 aa11.19□□□□□ -0.62
Smim17-202ENSMUST00000160218 Upf2A2AT37 1269 aaKnown RBP11.18□□□□□ -0.62
Smim17-202ENSMUST00000160218 TonslQ6NZL6 1363 aa11.16□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 137.8 ms