RNA–Protein interactions for RNA: ENSMUST00000159955.1

Lamb3-202, Transcript of Laminin subunit beta-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lamb3, Length 4,013 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lamb3-202ENSMUST00000159955 NischQ80TM9 1593 aa14.78□□□□□ -0.04
Lamb3-202ENSMUST00000159955 Rhox8Q6VSS7 320 aa14.48□□□□□ -0.09
Lamb3-202ENSMUST00000159955 Gm35339A0A140LHH9 1649 aa14.31□□□□□ -0.12
Lamb3-202ENSMUST00000159955 Abcc9P70170 1546 aa14.2□□□□□ -0.14
Lamb3-202ENSMUST00000159955 Abcc8B2RUS7 1588 aa13.97□□□□□ -0.17
Lamb3-202ENSMUST00000159955 Ccdc136Q3TVA9 1136 aa13.34□□□□□ -0.27
Lamb3-202ENSMUST00000159955 Rtl1Q7M732 1744 aa13.3□□□□□ -0.28
Lamb3-202ENSMUST00000159955 ScribQ80U72 1612 aa13.24□□□□□ -0.29
Lamb3-202ENSMUST00000159955 Ccdc180J3QNE4 1664 aa13.12□□□□□ -0.31
Lamb3-202ENSMUST00000159955 DiexfQ8BTT6 772 aaKnown RBP13.1□□□□□ -0.31
Lamb3-202ENSMUST00000159955 Ehmt2Q9Z148 1263 aaKnown RBP13.1□□□□□ -0.31
Lamb3-202ENSMUST00000159955 Amer1Q7TS75 1132 aa13.06□□□□□ -0.32
Lamb3-202ENSMUST00000159955 Rpgrip1Q9EPQ2 1331 aa13□□□□□ -0.33
Lamb3-202ENSMUST00000159955 Dcaf1Q80TR8 1506 aa13□□□□□ -0.33
Lamb3-202ENSMUST00000159955 Kdm5dQ62240 1548 aa12.97□□□□□ -0.33
Lamb3-202ENSMUST00000159955 NacadQ5SWP3 1504 aa12.96□□□□□ -0.33
Lamb3-202ENSMUST00000159955 Rb1cc1Q9ESK9 1588 aa12.94□□□□□ -0.34
Lamb3-202ENSMUST00000159955 Trim41Q5NCC3 630 aa12.93□□□□□ -0.34
Lamb3-202ENSMUST00000159955 Zcchc6Q5BLK4 1491 aaKnown RBP12.86□□□□□ -0.35
Lamb3-202ENSMUST00000159955 Cngb1E1AZ71 1325 aa12.81□□□□□ -0.36
Lamb3-202ENSMUST00000159955 Las1lA2BE28 776 aaKnown RBP12.8□□□□□ -0.36
Lamb3-202ENSMUST00000159955 Baz1aO88379 1555 aa12.77□□□□□ -0.37
Lamb3-202ENSMUST00000159955 HrcG5E8J6 738 aa12.74□□□□□ -0.37
Lamb3-202ENSMUST00000159955 CenpbP27790 599 aa12.73□□□□□ -0.37
Lamb3-202ENSMUST00000159955 Gab3Q8BSM5 595 aa12.71□□□□□ -0.37
Lamb3-202ENSMUST00000159955 Esf1Q3V1V3 845 aaKnown RBP12.68□□□□□ -0.38
Lamb3-202ENSMUST00000159955 Sycp2Q9CUU3 1500 aa12.67□□□□□ -0.38
Lamb3-202ENSMUST00000159955 Acin1Q9JIX8 1338 aaKnown RBP12.61□□□□□ -0.39
Lamb3-202ENSMUST00000159955 Pcgf6Q99NA9 353 aa12.55□□□□□ -0.4
Lamb3-202ENSMUST00000159955 Myt1Q8CFC2 1127 aa12.53□□□□□ -0.4
Lamb3-202ENSMUST00000159955 Crybg2B7ZCC2 1516 aa12.53□□□□□ -0.4
Lamb3-202ENSMUST00000159955 Brd4Q9ESU6 1400 aaKnown RBP12.46□□□□□ -0.41
Lamb3-202ENSMUST00000159955 BicraF8VPZ9 1578 aa12.41□□□□□ -0.42
Lamb3-202ENSMUST00000159955 Ttbk1Q6PCN3 1308 aa12.4□□□□□ -0.42
Lamb3-202ENSMUST00000159955 Chic1Q8CBW7 227 aa12.37□□□□□ -0.43
Lamb3-202ENSMUST00000159955 Smarca2Q6DIC0 1577 aa12.35□□□□□ -0.43
Lamb3-202ENSMUST00000159955 Bcl11aQ9QYE3 773 aa12.34□□□□□ -0.43
Lamb3-202ENSMUST00000159955 Myt1lP97500 1187 aa12.31□□□□□ -0.44
Lamb3-202ENSMUST00000159955 Cep164Q5DU05 1446 aa12.27□□□□□ -0.45
Lamb3-202ENSMUST00000159955 Npm2Q80W85 207 aa12.25□□□□□ -0.45
Lamb3-202ENSMUST00000159955 Zeb1Q64318 1117 aa12.23□□□□□ -0.45
Lamb3-202ENSMUST00000159955 Cecr2E9Q2Z1 1453 aa12.2□□□□□ -0.46
Lamb3-202ENSMUST00000159955 Golga3P55937 1487 aa12.17□□□□□ -0.46
Lamb3-202ENSMUST00000159955 UbtfP25976 765 aaKnown RBP12.16□□□□□ -0.46
Lamb3-202ENSMUST00000159955 Rsf1E9PWW9 1441 aaKnown RBP12.15□□□□□ -0.46
Lamb3-202ENSMUST00000159955 Pds5bQ4VA53 1446 aaKnown RBP12.13□□□□□ -0.47
Lamb3-202ENSMUST00000159955 Il27Q8K3I6 234 aa12.13□□□□□ -0.47
Lamb3-202ENSMUST00000159955 PrkcshO08795 521 aa12.12□□□□□ -0.47
Lamb3-202ENSMUST00000159955 Supt5hO55201 1082 aaKnown RBP12.11□□□□□ -0.47
Lamb3-202ENSMUST00000159955 Ccdc88bQ4QRL3 1481 aa12.07□□□□□ -0.48
Lamb3-202ENSMUST00000159955 Neurod1Q60867 357 aa12.07□□□□□ -0.48
Lamb3-202ENSMUST00000159955 CftrP26361 1476 aa12.07□□□□□ -0.48
Lamb3-202ENSMUST00000159955 Atad2bE9Q166 1460 aaKnown RBP12.05□□□□□ -0.48
Lamb3-202ENSMUST00000159955 Dnajc5bQ9CQ94 199 aa12.03□□□□□ -0.48
Lamb3-202ENSMUST00000159955 Synj1Q8CHC4 1574 aa12.02□□□□□ -0.48
Lamb3-202ENSMUST00000159955 Mier1Q5UAK0 511 aa12.02□□□□□ -0.49
Lamb3-202ENSMUST00000159955 Smarca4Q3TKT4 1613 aaKnown RBP12.01□□□□□ -0.49
Lamb3-202ENSMUST00000159955 Wdr66E9Q743 1299 aa11.99□□□□□ -0.49
Lamb3-202ENSMUST00000159955 NefmP08553 848 aa11.97□□□□□ -0.49
Lamb3-202ENSMUST00000159955 Cttnbp2B9EJA2 1648 aa11.95□□□□□ -0.5
Lamb3-202ENSMUST00000159955 Ercc6F8VPZ5 1481 aa11.94□□□□□ -0.5
Lamb3-202ENSMUST00000159955 Iqgap2Q3UQ44 1575 aa11.94□□□□□ -0.5
Lamb3-202ENSMUST00000159955 Ap3b1Q9Z1T1 1105 aa11.94□□□□□ -0.5
Lamb3-202ENSMUST00000159955 Plppr3Q7TPB0 716 aa11.91□□□□□ -0.5
Lamb3-202ENSMUST00000159955 1700123L14RikQ3V2K7 440 aa11.9□□□□□ -0.5
Lamb3-202ENSMUST00000159955 Gm38655A0A286YDK6 273 aa11.89□□□□□ -0.51
Lamb3-202ENSMUST00000159955 Plekhg3Q4VAC9 1341 aa11.88□□□□□ -0.51
Lamb3-202ENSMUST00000159955 Ubl4bQ9CQ84 188 aa11.87□□□□□ -0.51
Lamb3-202ENSMUST00000159955 Fmn1Q05860 1466 aa11.87□□□□□ -0.51
Lamb3-202ENSMUST00000159955 Ppargc1bQ8VHJ7 1014 aa11.83□□□□□ -0.51
Lamb3-202ENSMUST00000159955 Npm1Q61937 292 aaKnown RBP11.83□□□□□ -0.52
Lamb3-202ENSMUST00000159955 Frmpd1A2AKB4 1549 aa11.8□□□□□ -0.52
Lamb3-202ENSMUST00000159955 Csrnp3P59055 597 aa11.8□□□□□ -0.52
Lamb3-202ENSMUST00000159955 Kif15Q6P9L6 1387 aa11.79□□□□□ -0.52
Lamb3-202ENSMUST00000159955 Clip1Q922J3 1391 aa11.76□□□□□ -0.53
Lamb3-202ENSMUST00000159955 Phldb1Q6PDH0 1371 aaKnown RBP11.75□□□□□ -0.53
Lamb3-202ENSMUST00000159955 Wdr62Q3U3T8 1523 aa11.74□□□□□ -0.53
Lamb3-202ENSMUST00000159955 Thoc2B1AZI6 1594 aaKnown RBP11.73□□□□□ -0.53
Lamb3-202ENSMUST00000159955 Cc2d2aQ8CFW7 1633 aa11.73□□□□□ -0.53
Lamb3-202ENSMUST00000159955 Ube2uB1AUC4 352 aa11.71□□□□□ -0.53
Lamb3-202ENSMUST00000159955 Pelp1Q9DBD5 1123 aaKnown RBP11.7□□□□□ -0.54
Lamb3-202ENSMUST00000159955 Ccdc18Q640L5 1455 aa11.69□□□□□ -0.54
Lamb3-202ENSMUST00000159955 Top2bQ64511 1612 aa11.69□□□□□ -0.54
Lamb3-202ENSMUST00000159955 Sall2Q9QX96 1004 aa11.68□□□□□ -0.54
Lamb3-202ENSMUST00000159955 Lmod2Q3UHZ5 550 aa11.68□□□□□ -0.54
Lamb3-202ENSMUST00000159955 Fam50aQ9WV03 339 aaKnown RBP11.67□□□□□ -0.54
Lamb3-202ENSMUST00000159955 Cep162Q6ZQ06 1403 aa11.67□□□□□ -0.54
Lamb3-202ENSMUST00000159955 Pknox2Q8BG99 474 aa11.66□□□□□ -0.54
Lamb3-202ENSMUST00000159955 Anks4bQ8K3X6 423 aa11.65□□□□□ -0.54
Lamb3-202ENSMUST00000159955 Rapgef2Q8CHG7 1496 aa11.65□□□□□ -0.55
Lamb3-202ENSMUST00000159955 Eid3Q3V124 375 aa11.64□□□□□ -0.55
Lamb3-202ENSMUST00000159955 TonslQ6NZL6 1363 aa11.63□□□□□ -0.55
Lamb3-202ENSMUST00000159955 Top2aQ01320 1528 aaKnown RBP11.6□□□□□ -0.55
Lamb3-202ENSMUST00000159955 Ifnlr1Q8CGK5 535 aa11.57□□□□□ -0.56
Lamb3-202ENSMUST00000159955 Cux2P70298 1426 aa11.56□□□□□ -0.56
Lamb3-202ENSMUST00000159955 Aebp2Q9Z248 504 aaKnown RBP11.56□□□□□ -0.56
Lamb3-202ENSMUST00000159955 Setd5Q5XJV7 1441 aa11.56□□□□□ -0.56
Lamb3-202ENSMUST00000159955 Fam135aQ6NS59 1506 aa11.56□□□□□ -0.56
Lamb3-202ENSMUST00000159955 Eea1Q8BL66 1411 aa11.55□□□□□ -0.56
Lamb3-202ENSMUST00000159955 Nop58Q6DFW4 536 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 72.5 ms