RNA–Protein interactions for RNA: ENSMUST00000154292.8

Ush1c-206, Transcript of Harmonin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ush1c, Length 2,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1c-206ENSMUST00000154292 NischQ80TM9 1593 aa22.98■■□□□ 1.27
Ush1c-206ENSMUST00000154292 Gm35339A0A140LHH9 1649 aa22.75■■□□□ 1.23
Ush1c-206ENSMUST00000154292 Abcc9P70170 1546 aa22.3■■□□□ 1.16
Ush1c-206ENSMUST00000154292 Abcc8B2RUS7 1588 aa21.89■■□□□ 1.09
Ush1c-206ENSMUST00000154292 Rhox8Q6VSS7 320 aa20.98■□□□□ 0.95
Ush1c-206ENSMUST00000154292 ScribQ80U72 1612 aa20.62■□□□□ 0.89
Ush1c-206ENSMUST00000154292 Rpgrip1Q9EPQ2 1331 aa20.51■□□□□ 0.87
Ush1c-206ENSMUST00000154292 Rtl1Q7M732 1744 aa20.44■□□□□ 0.86
Ush1c-206ENSMUST00000154292 Dcaf1Q80TR8 1506 aa20.3■□□□□ 0.84
Ush1c-206ENSMUST00000154292 Ccdc180J3QNE4 1664 aa20.24■□□□□ 0.83
Ush1c-206ENSMUST00000154292 Rb1cc1Q9ESK9 1588 aa20.15■□□□□ 0.82
Ush1c-206ENSMUST00000154292 Kdm5dQ62240 1548 aa20.15■□□□□ 0.82
Ush1c-206ENSMUST00000154292 NacadQ5SWP3 1504 aa19.97■□□□□ 0.79
Ush1c-206ENSMUST00000154292 Acin1Q9JIX8 1338 aaKnown RBP19.96■□□□□ 0.79
Ush1c-206ENSMUST00000154292 Baz1aO88379 1555 aa19.87■□□□□ 0.77
Ush1c-206ENSMUST00000154292 Zcchc6Q5BLK4 1491 aaKnown RBP19.79■□□□□ 0.76
Ush1c-206ENSMUST00000154292 Ehmt2Q9Z148 1263 aaKnown RBP19.72■□□□□ 0.75
Ush1c-206ENSMUST00000154292 Pcgf6Q99NA9 353 aa19.6■□□□□ 0.73
Ush1c-206ENSMUST00000154292 Sycp2Q9CUU3 1500 aa19.55■□□□□ 0.72
Ush1c-206ENSMUST00000154292 Ccdc136Q3TVA9 1136 aa19.49■□□□□ 0.71
Ush1c-206ENSMUST00000154292 Crybg2B7ZCC2 1516 aa19.46■□□□□ 0.71
Ush1c-206ENSMUST00000154292 Smarca2Q6DIC0 1577 aa19.4■□□□□ 0.7
Ush1c-206ENSMUST00000154292 HrcG5E8J6 738 aa19.21■□□□□ 0.67
Ush1c-206ENSMUST00000154292 BicraF8VPZ9 1578 aa19.2■□□□□ 0.66
Ush1c-206ENSMUST00000154292 Supt5hO55201 1082 aaKnown RBP19.1■□□□□ 0.65
Ush1c-206ENSMUST00000154292 Trim41Q5NCC3 630 aa19.02■□□□□ 0.64
Ush1c-206ENSMUST00000154292 Cecr2E9Q2Z1 1453 aa19.01■□□□□ 0.63
Ush1c-206ENSMUST00000154292 Neurod1Q60867 357 aa18.91■□□□□ 0.62
Ush1c-206ENSMUST00000154292 Brd4Q9ESU6 1400 aaKnown RBP18.87■□□□□ 0.61
Ush1c-206ENSMUST00000154292 Synj1Q8CHC4 1574 aa18.82■□□□□ 0.6
Ush1c-206ENSMUST00000154292 CftrP26361 1476 aa18.68■□□□□ 0.58
Ush1c-206ENSMUST00000154292 Cngb1E1AZ71 1325 aa18.68■□□□□ 0.58
Ush1c-206ENSMUST00000154292 Smarca4Q3TKT4 1613 aaKnown RBP18.68■□□□□ 0.58
Ush1c-206ENSMUST00000154292 Las1lA2BE28 776 aaKnown RBP18.66■□□□□ 0.58
Ush1c-206ENSMUST00000154292 Cttnbp2B9EJA2 1648 aa18.65■□□□□ 0.58
Ush1c-206ENSMUST00000154292 Zeb1Q64318 1117 aa18.64■□□□□ 0.57
Ush1c-206ENSMUST00000154292 Cep164Q5DU05 1446 aa18.6■□□□□ 0.57
Ush1c-206ENSMUST00000154292 Golga3P55937 1487 aa18.6■□□□□ 0.57
Ush1c-206ENSMUST00000154292 Rsf1E9PWW9 1441 aaKnown RBP18.53■□□□□ 0.56
Ush1c-206ENSMUST00000154292 Esf1Q3V1V3 845 aaKnown RBP18.53■□□□□ 0.56
Ush1c-206ENSMUST00000154292 Chic1Q8CBW7 227 aa18.48■□□□□ 0.55
Ush1c-206ENSMUST00000154292 Top2bQ64511 1612 aa18.48■□□□□ 0.55
Ush1c-206ENSMUST00000154292 Iqgap2Q3UQ44 1575 aa18.47■□□□□ 0.55
Ush1c-206ENSMUST00000154292 Ccdc88bQ4QRL3 1481 aa18.47■□□□□ 0.55
Ush1c-206ENSMUST00000154292 1700123L14RikQ3V2K7 440 aa18.4■□□□□ 0.54
Ush1c-206ENSMUST00000154292 Sall2Q9QX96 1004 aa18.39■□□□□ 0.53
Ush1c-206ENSMUST00000154292 NefmP08553 848 aa18.38■□□□□ 0.53
Ush1c-206ENSMUST00000154292 Cc2d2aQ8CFW7 1633 aa18.38■□□□□ 0.53
Ush1c-206ENSMUST00000154292 Atad2bE9Q166 1460 aaKnown RBP18.38■□□□□ 0.53
Ush1c-206ENSMUST00000154292 Pds5bQ4VA53 1446 aaKnown RBP18.33■□□□□ 0.52
Ush1c-206ENSMUST00000154292 Csrnp3P59055 597 aa18.31■□□□□ 0.52
Ush1c-206ENSMUST00000154292 Gab3Q8BSM5 595 aa18.3■□□□□ 0.52
Ush1c-206ENSMUST00000154292 Anks4bQ8K3X6 423 aa18.3■□□□□ 0.52
Ush1c-206ENSMUST00000154292 Mier1Q5UAK0 511 aa18.27■□□□□ 0.51
Ush1c-206ENSMUST00000154292 Fmn1Q05860 1466 aa18.16■□□□□ 0.5
Ush1c-206ENSMUST00000154292 Wdr62Q3U3T8 1523 aa18.12■□□□□ 0.49
Ush1c-206ENSMUST00000154292 Frmpd1A2AKB4 1549 aa18.12■□□□□ 0.49
Ush1c-206ENSMUST00000154292 CenpbP27790 599 aa18.11■□□□□ 0.49
Ush1c-206ENSMUST00000154292 Wdr66E9Q743 1299 aa18.07■□□□□ 0.48
Ush1c-206ENSMUST00000154292 Top2aQ01320 1528 aaKnown RBP18.06■□□□□ 0.48
Ush1c-206ENSMUST00000154292 Ercc6F8VPZ5 1481 aa18.05■□□□□ 0.48
Ush1c-206ENSMUST00000154292 Myt1Q8CFC2 1127 aa18.03■□□□□ 0.48
Ush1c-206ENSMUST00000154292 Unc13aQ4KUS2 1712 aa18.02■□□□□ 0.48
Ush1c-206ENSMUST00000154292 Cdk11bP24788 784 aaKnown RBP18■□□□□ 0.47
Ush1c-206ENSMUST00000154292 Aplp2Q06335 707 aa18■□□□□ 0.47
Ush1c-206ENSMUST00000154292 TnnQ80Z71 1560 aa17.98■□□□□ 0.47
Ush1c-206ENSMUST00000154292 Aebp2Q9Z248 504 aaKnown RBP17.96■□□□□ 0.47
Ush1c-206ENSMUST00000154292 Nop58Q6DFW4 536 aaKnown RBP17.96■□□□□ 0.46
Ush1c-206ENSMUST00000154292 Rapgef2Q8CHG7 1496 aa17.92■□□□□ 0.46
Ush1c-206ENSMUST00000154292 Thoc2B1AZI6 1594 aaKnown RBP17.88■□□□□ 0.45
Ush1c-206ENSMUST00000154292 Lamc3Q9R0B6 1581 aa17.88■□□□□ 0.45
Ush1c-206ENSMUST00000154292 Gm38655A0A286YDK6 273 aa17.87■□□□□ 0.45
Ush1c-206ENSMUST00000154292 Ppargc1bQ8VHJ7 1014 aa17.87■□□□□ 0.45
Ush1c-206ENSMUST00000154292 ClspnQ80YR7 1315 aa17.85■□□□□ 0.45
Ush1c-206ENSMUST00000154292 Kif15Q6P9L6 1387 aa17.83■□□□□ 0.44
Ush1c-206ENSMUST00000154292 UbtfP25976 765 aaKnown RBP17.8■□□□□ 0.44
Ush1c-206ENSMUST00000154292 Cep162Q6ZQ06 1403 aa17.78■□□□□ 0.44
Ush1c-206ENSMUST00000154292 Npm2Q80W85 207 aa17.75■□□□□ 0.43
Ush1c-206ENSMUST00000154292 Il27Q8K3I6 234 aa17.74■□□□□ 0.43
Ush1c-206ENSMUST00000154292 Camsap1A2AHC3 1581 aa17.73■□□□□ 0.43
Ush1c-206ENSMUST00000154292 Myt1lP97500 1187 aa17.72■□□□□ 0.43
Ush1c-206ENSMUST00000154292 Phldb1Q6PDH0 1371 aaKnown RBP17.71■□□□□ 0.43
Ush1c-206ENSMUST00000154292 Eif4g1Q6NZJ6 1600 aaKnown RBP17.71■□□□□ 0.43
Ush1c-206ENSMUST00000154292 PtprkP35822 1457 aa17.67■□□□□ 0.42
Ush1c-206ENSMUST00000154292 Fam135aQ6NS59 1506 aa17.64■□□□□ 0.41
Ush1c-206ENSMUST00000154292 Ccdc18Q640L5 1455 aa17.63■□□□□ 0.41
Ush1c-206ENSMUST00000154292 DiexfQ8BTT6 772 aaKnown RBP17.6■□□□□ 0.41
Ush1c-206ENSMUST00000154292 Ubl4bQ9CQ84 188 aa17.59■□□□□ 0.41
Ush1c-206ENSMUST00000154292 TonslQ6NZL6 1363 aa17.59■□□□□ 0.41
Ush1c-206ENSMUST00000154292 Cux2P70298 1426 aa17.58■□□□□ 0.41
Ush1c-206ENSMUST00000154292 Shroom4Q1W617 1475 aa17.58■□□□□ 0.4
Ush1c-206ENSMUST00000154292 Arhgap35Q91YM2 1499 aa17.58■□□□□ 0.4
Ush1c-206ENSMUST00000154292 NrkQ9R0G8 1455 aa17.58■□□□□ 0.4
Ush1c-206ENSMUST00000154292 Grin2bQ01097 1482 aa17.56■□□□□ 0.4
Ush1c-206ENSMUST00000154292 Fam71e1A1L3C1 212 aa17.48■□□□□ 0.39
Ush1c-206ENSMUST00000154292 Clip1Q922J3 1391 aa17.46■□□□□ 0.38
Ush1c-206ENSMUST00000154292 Npm1Q61937 292 aaKnown RBP17.45■□□□□ 0.38
Ush1c-206ENSMUST00000154292 Bcl11aQ9QYE3 773 aa17.45■□□□□ 0.38
Ush1c-206ENSMUST00000154292 Mapk8ip2Q9ERE9 830 aa17.45■□□□□ 0.38
Ush1c-206ENSMUST00000154292 SafbD3YXK2 937 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms