RNA–Protein interactions for RNA: ENSMUST00000152225.1

Smarcal1-207, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smarcal1, Length 2,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1-207ENSMUST00000152225 NischQ80TM9 1593 aa14.37□□□□□ -0.11
Smarcal1-207ENSMUST00000152225 Gm35339A0A140LHH9 1649 aa14.26□□□□□ -0.13
Smarcal1-207ENSMUST00000152225 Rtl1Q7M732 1744 aa14.06□□□□□ -0.16
Smarcal1-207ENSMUST00000152225 Abcc9P70170 1546 aa14.06□□□□□ -0.16
Smarcal1-207ENSMUST00000152225 Ccdc180J3QNE4 1664 aa13.72□□□□□ -0.21
Smarcal1-207ENSMUST00000152225 Abcc8B2RUS7 1588 aa13.6□□□□□ -0.23
Smarcal1-207ENSMUST00000152225 Rpgrip1Q9EPQ2 1331 aa13.56□□□□□ -0.24
Smarcal1-207ENSMUST00000152225 Rhox8Q6VSS7 320 aa13.2□□□□□ -0.3
Smarcal1-207ENSMUST00000152225 Zcchc6Q5BLK4 1491 aaKnown RBP13.2□□□□□ -0.3
Smarcal1-207ENSMUST00000152225 Acin1Q9JIX8 1338 aaKnown RBP12.99□□□□□ -0.33
Smarcal1-207ENSMUST00000152225 Dcaf1Q80TR8 1506 aa12.97□□□□□ -0.33
Smarcal1-207ENSMUST00000152225 HrcG5E8J6 738 aa12.9□□□□□ -0.34
Smarcal1-207ENSMUST00000152225 Rb1cc1Q9ESK9 1588 aa12.61□□□□□ -0.39
Smarcal1-207ENSMUST00000152225 Baz1aO88379 1555 aa12.55□□□□□ -0.4
Smarcal1-207ENSMUST00000152225 Pcgf6Q99NA9 353 aa12.52□□□□□ -0.41
Smarcal1-207ENSMUST00000152225 ScribQ80U72 1612 aa12.48□□□□□ -0.41
Smarcal1-207ENSMUST00000152225 Trim41Q5NCC3 630 aa12.43□□□□□ -0.42
Smarcal1-207ENSMUST00000152225 Crybg2B7ZCC2 1516 aa12.43□□□□□ -0.42
Smarcal1-207ENSMUST00000152225 Cep164Q5DU05 1446 aa12.39□□□□□ -0.43
Smarcal1-207ENSMUST00000152225 Smarca2Q6DIC0 1577 aa12.31□□□□□ -0.44
Smarcal1-207ENSMUST00000152225 Kdm5dQ62240 1548 aa12.29□□□□□ -0.44
Smarcal1-207ENSMUST00000152225 Ehmt2Q9Z148 1263 aaKnown RBP12.23□□□□□ -0.45
Smarcal1-207ENSMUST00000152225 NacadQ5SWP3 1504 aa12.23□□□□□ -0.45
Smarcal1-207ENSMUST00000152225 Ccdc136Q3TVA9 1136 aa12.18□□□□□ -0.46
Smarcal1-207ENSMUST00000152225 Supt5hO55201 1082 aaKnown RBP12.12□□□□□ -0.47
Smarcal1-207ENSMUST00000152225 NefmP08553 848 aa12.11□□□□□ -0.47
Smarcal1-207ENSMUST00000152225 Las1lA2BE28 776 aaKnown RBP12.07□□□□□ -0.48
Smarcal1-207ENSMUST00000152225 Cngb1E1AZ71 1325 aa12.04□□□□□ -0.48
Smarcal1-207ENSMUST00000152225 Myt1Q8CFC2 1127 aa12.02□□□□□ -0.49
Smarcal1-207ENSMUST00000152225 Neurod1Q60867 357 aa12□□□□□ -0.49
Smarcal1-207ENSMUST00000152225 Brd4Q9ESU6 1400 aaKnown RBP11.96□□□□□ -0.49
Smarcal1-207ENSMUST00000152225 Rsf1E9PWW9 1441 aaKnown RBP11.96□□□□□ -0.49
Smarcal1-207ENSMUST00000152225 Sycp2Q9CUU3 1500 aa11.93□□□□□ -0.5
Smarcal1-207ENSMUST00000152225 Golga3P55937 1487 aa11.91□□□□□ -0.5
Smarcal1-207ENSMUST00000152225 Anks4bQ8K3X6 423 aa11.89□□□□□ -0.51
Smarcal1-207ENSMUST00000152225 Top2bQ64511 1612 aa11.87□□□□□ -0.51
Smarcal1-207ENSMUST00000152225 Mier1Q5UAK0 511 aa11.82□□□□□ -0.52
Smarcal1-207ENSMUST00000152225 Ccdc88bQ4QRL3 1481 aa11.81□□□□□ -0.52
Smarcal1-207ENSMUST00000152225 CenpbP27790 599 aa11.8□□□□□ -0.52
Smarcal1-207ENSMUST00000152225 Chic1Q8CBW7 227 aa11.79□□□□□ -0.52
Smarcal1-207ENSMUST00000152225 Synj1Q8CHC4 1574 aa11.77□□□□□ -0.53
Smarcal1-207ENSMUST00000152225 DiexfQ8BTT6 772 aaKnown RBP11.76□□□□□ -0.53
Smarcal1-207ENSMUST00000152225 Sall2Q9QX96 1004 aa11.76□□□□□ -0.53
Smarcal1-207ENSMUST00000152225 Zeb1Q64318 1117 aa11.72□□□□□ -0.53
Smarcal1-207ENSMUST00000152225 Cttnbp2B9EJA2 1648 aa11.72□□□□□ -0.53
Smarcal1-207ENSMUST00000152225 Rapgef2Q8CHG7 1496 aa11.71□□□□□ -0.54
Smarcal1-207ENSMUST00000152225 Cecr2E9Q2Z1 1453 aa11.7□□□□□ -0.54
Smarcal1-207ENSMUST00000152225 Aplp2Q06335 707 aa11.7□□□□□ -0.54
Smarcal1-207ENSMUST00000152225 CftrP26361 1476 aa11.68□□□□□ -0.54
Smarcal1-207ENSMUST00000152225 1700123L14RikQ3V2K7 440 aa11.67□□□□□ -0.54
Smarcal1-207ENSMUST00000152225 ClspnQ80YR7 1315 aa11.65□□□□□ -0.54
Smarcal1-207ENSMUST00000152225 Top2aQ01320 1528 aaKnown RBP11.62□□□□□ -0.55
Smarcal1-207ENSMUST00000152225 Gab3Q8BSM5 595 aa11.59□□□□□ -0.55
Smarcal1-207ENSMUST00000152225 Fmn1Q05860 1466 aa11.59□□□□□ -0.55
Smarcal1-207ENSMUST00000152225 BicraF8VPZ9 1578 aa11.59□□□□□ -0.55
Smarcal1-207ENSMUST00000152225 Cc2d2aQ8CFW7 1633 aa11.59□□□□□ -0.55
Smarcal1-207ENSMUST00000152225 Cdk11bP24788 784 aaKnown RBP11.59□□□□□ -0.55
Smarcal1-207ENSMUST00000152225 Eif4g1Q6NZJ6 1600 aaKnown RBP11.58□□□□□ -0.56
Smarcal1-207ENSMUST00000152225 Csrnp3P59055 597 aa11.55□□□□□ -0.56
Smarcal1-207ENSMUST00000152225 Bcl11aQ9QYE3 773 aa11.55□□□□□ -0.56
Smarcal1-207ENSMUST00000152225 Nop58Q6DFW4 536 aaKnown RBP11.53□□□□□ -0.56
Smarcal1-207ENSMUST00000152225 Cep162Q6ZQ06 1403 aa11.52□□□□□ -0.57
Smarcal1-207ENSMUST00000152225 Smarca4Q3TKT4 1613 aaKnown RBP11.5□□□□□ -0.57
Smarcal1-207ENSMUST00000152225 Ncapd3Q6ZQK0 1506 aa11.49□□□□□ -0.57
Smarcal1-207ENSMUST00000152225 Aebp2Q9Z248 504 aaKnown RBP11.49□□□□□ -0.57
Smarcal1-207ENSMUST00000152225 TonslQ6NZL6 1363 aa11.45□□□□□ -0.58
Smarcal1-207ENSMUST00000152225 Wdr66E9Q743 1299 aa11.42□□□□□ -0.58
Smarcal1-207ENSMUST00000152225 TchhA0A0B4J1F9 1599 aa11.4□□□□□ -0.58
Smarcal1-207ENSMUST00000152225 TnnQ80Z71 1560 aa11.39□□□□□ -0.59
Smarcal1-207ENSMUST00000152225 Kdm5bQ80Y84 1544 aa11.39□□□□□ -0.59
Smarcal1-207ENSMUST00000152225 UbtfP25976 765 aaKnown RBP11.39□□□□□ -0.59
Smarcal1-207ENSMUST00000152225 Tnnt3Q9QZ47 272 aa11.38□□□□□ -0.59
Smarcal1-207ENSMUST00000152225 Ccdc18Q640L5 1455 aa11.38□□□□□ -0.59
Smarcal1-207ENSMUST00000152225 Esf1Q3V1V3 845 aaKnown RBP11.37□□□□□ -0.59
Smarcal1-207ENSMUST00000152225 Clip1Q922J3 1391 aa11.31□□□□□ -0.6
Smarcal1-207ENSMUST00000152225 NrkQ9R0G8 1455 aa11.3□□□□□ -0.6
Smarcal1-207ENSMUST00000152225 PrkcshO08795 521 aa11.28□□□□□ -0.6
Smarcal1-207ENSMUST00000152225 Arhgef5E9Q7D5 1581 aa11.28□□□□□ -0.6
Smarcal1-207ENSMUST00000152225 Map3k1P53349 1493 aa11.27□□□□□ -0.61
Smarcal1-207ENSMUST00000152225 Iqgap2Q3UQ44 1575 aa11.26□□□□□ -0.61
Smarcal1-207ENSMUST00000152225 Arhgap35Q91YM2 1499 aa11.25□□□□□ -0.61
Smarcal1-207ENSMUST00000152225 Erich3F6QRE9 1637 aa11.24□□□□□ -0.61
Smarcal1-207ENSMUST00000152225 Eea1Q8BL66 1411 aa11.24□□□□□ -0.61
Smarcal1-207ENSMUST00000152225 Arap1Q4LDD4 1452 aa11.21□□□□□ -0.61
Smarcal1-207ENSMUST00000152225 Tiam1Q60610 1591 aa11.21□□□□□ -0.61
Smarcal1-207ENSMUST00000152225 UacaQ8CGB3 1411 aa11.2□□□□□ -0.62
Smarcal1-207ENSMUST00000152225 Camsap2Q8C1B1 1461 aa11.2□□□□□ -0.62
Smarcal1-207ENSMUST00000152225 Stra8P70278 393 aa11.19□□□□□ -0.62
Smarcal1-207ENSMUST00000152225 Gm38655A0A286YDK6 273 aa11.18□□□□□ -0.62
Smarcal1-207ENSMUST00000152225 Baz1bQ9Z277 1479 aa11.18□□□□□ -0.62
Smarcal1-207ENSMUST00000152225 Amer1Q7TS75 1132 aa11.17□□□□□ -0.62
Smarcal1-207ENSMUST00000152225 Lamc3Q9R0B6 1581 aa11.16□□□□□ -0.62
Smarcal1-207ENSMUST00000152225 Rtl5Q5DTT4 599 aa11.16□□□□□ -0.62
Smarcal1-207ENSMUST00000152225 Ankrd36D3Z4K0 1415 aa11.14□□□□□ -0.63
Smarcal1-207ENSMUST00000152225 Atad2bE9Q166 1460 aaKnown RBP11.14□□□□□ -0.63
Smarcal1-207ENSMUST00000152225 Shroom4Q1W617 1475 aa11.14□□□□□ -0.63
Smarcal1-207ENSMUST00000152225 AqrQ8CFQ3 1481 aaKnown RBP11.13□□□□□ -0.63
Smarcal1-207ENSMUST00000152225 Ppargc1bQ8VHJ7 1014 aa11.12□□□□□ -0.63
Smarcal1-207ENSMUST00000152225 Peg3Q3URU2 1571 aa11.12□□□□□ -0.63
Smarcal1-207ENSMUST00000152225 Myt1lP97500 1187 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 117 ms