RNA–Protein interactions for RNA: ENSMUST00000151403.8

Tro-205, Transcript of Tro protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Tro, Length 2,715 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-205ENSMUST00000151403 NischQ80TM9 1593 aa16.7■□□□□ 0.26
Tro-205ENSMUST00000151403 Gm35339A0A140LHH9 1649 aa16.61■□□□□ 0.25
Tro-205ENSMUST00000151403 Abcc9P70170 1546 aa16.29■□□□□ 0.2
Tro-205ENSMUST00000151403 Abcc8B2RUS7 1588 aa15.92■□□□□ 0.14
Tro-205ENSMUST00000151403 Rtl1Q7M732 1744 aa15.27■□□□□ 0.03
Tro-205ENSMUST00000151403 Rhox8Q6VSS7 320 aa15.15■□□□□ 0.02
Tro-205ENSMUST00000151403 Dcaf1Q80TR8 1506 aa14.93□□□□□ -0.02
Tro-205ENSMUST00000151403 Ccdc180J3QNE4 1664 aa14.9□□□□□ -0.02
Tro-205ENSMUST00000151403 ScribQ80U72 1612 aa14.86□□□□□ -0.03
Tro-205ENSMUST00000151403 Zcchc6Q5BLK4 1491 aaKnown RBP14.69□□□□□ -0.06
Tro-205ENSMUST00000151403 Rb1cc1Q9ESK9 1588 aa14.63□□□□□ -0.07
Tro-205ENSMUST00000151403 Kdm5dQ62240 1548 aa14.55□□□□□ -0.08
Tro-205ENSMUST00000151403 Baz1aO88379 1555 aa14.5□□□□□ -0.09
Tro-205ENSMUST00000151403 NacadQ5SWP3 1504 aa14.45□□□□□ -0.1
Tro-205ENSMUST00000151403 Rpgrip1Q9EPQ2 1331 aa14.42□□□□□ -0.1
Tro-205ENSMUST00000151403 Crybg2B7ZCC2 1516 aa14.3□□□□□ -0.12
Tro-205ENSMUST00000151403 Smarca2Q6DIC0 1577 aa14.18□□□□□ -0.14
Tro-205ENSMUST00000151403 Sycp2Q9CUU3 1500 aa14.15□□□□□ -0.15
Tro-205ENSMUST00000151403 HrcG5E8J6 738 aa14.12□□□□□ -0.15
Tro-205ENSMUST00000151403 Acin1Q9JIX8 1338 aaKnown RBP14.1□□□□□ -0.15
Tro-205ENSMUST00000151403 Ccdc136Q3TVA9 1136 aa14.04□□□□□ -0.16
Tro-205ENSMUST00000151403 Trim41Q5NCC3 630 aa13.88□□□□□ -0.19
Tro-205ENSMUST00000151403 Ehmt2Q9Z148 1263 aaKnown RBP13.88□□□□□ -0.19
Tro-205ENSMUST00000151403 BicraF8VPZ9 1578 aa13.83□□□□□ -0.2
Tro-205ENSMUST00000151403 Brd4Q9ESU6 1400 aaKnown RBP13.77□□□□□ -0.21
Tro-205ENSMUST00000151403 Cep164Q5DU05 1446 aa13.76□□□□□ -0.21
Tro-205ENSMUST00000151403 Cecr2E9Q2Z1 1453 aa13.74□□□□□ -0.21
Tro-205ENSMUST00000151403 Synj1Q8CHC4 1574 aa13.67□□□□□ -0.22
Tro-205ENSMUST00000151403 Pcgf6Q99NA9 353 aa13.66□□□□□ -0.22
Tro-205ENSMUST00000151403 Golga3P55937 1487 aa13.62□□□□□ -0.23
Tro-205ENSMUST00000151403 CftrP26361 1476 aa13.59□□□□□ -0.23
Tro-205ENSMUST00000151403 Cttnbp2B9EJA2 1648 aa13.57□□□□□ -0.24
Tro-205ENSMUST00000151403 Rsf1E9PWW9 1441 aaKnown RBP13.57□□□□□ -0.24
Tro-205ENSMUST00000151403 Top2bQ64511 1612 aa13.54□□□□□ -0.24
Tro-205ENSMUST00000151403 Smarca4Q3TKT4 1613 aaKnown RBP13.53□□□□□ -0.24
Tro-205ENSMUST00000151403 Ccdc88bQ4QRL3 1481 aa13.48□□□□□ -0.25
Tro-205ENSMUST00000151403 Cngb1E1AZ71 1325 aa13.45□□□□□ -0.26
Tro-205ENSMUST00000151403 Chic1Q8CBW7 227 aa13.45□□□□□ -0.26
Tro-205ENSMUST00000151403 Supt5hO55201 1082 aaKnown RBP13.37□□□□□ -0.27
Tro-205ENSMUST00000151403 Cc2d2aQ8CFW7 1633 aa13.34□□□□□ -0.27
Tro-205ENSMUST00000151403 Iqgap2Q3UQ44 1575 aa13.33□□□□□ -0.28
Tro-205ENSMUST00000151403 Fmn1Q05860 1466 aa13.29□□□□□ -0.28
Tro-205ENSMUST00000151403 Esf1Q3V1V3 845 aaKnown RBP13.28□□□□□ -0.28
Tro-205ENSMUST00000151403 Atad2bE9Q166 1460 aaKnown RBP13.27□□□□□ -0.28
Tro-205ENSMUST00000151403 Top2aQ01320 1528 aaKnown RBP13.24□□□□□ -0.29
Tro-205ENSMUST00000151403 Gab3Q8BSM5 595 aa13.22□□□□□ -0.29
Tro-205ENSMUST00000151403 Pds5bQ4VA53 1446 aaKnown RBP13.2□□□□□ -0.3
Tro-205ENSMUST00000151403 Rapgef2Q8CHG7 1496 aa13.2□□□□□ -0.3
Tro-205ENSMUST00000151403 TnnQ80Z71 1560 aa13.15□□□□□ -0.3
Tro-205ENSMUST00000151403 Neurod1Q60867 357 aa13.14□□□□□ -0.31
Tro-205ENSMUST00000151403 NefmP08553 848 aa13.1□□□□□ -0.31
Tro-205ENSMUST00000151403 Zeb1Q64318 1117 aa13.1□□□□□ -0.31
Tro-205ENSMUST00000151403 Wdr62Q3U3T8 1523 aa13.09□□□□□ -0.31
Tro-205ENSMUST00000151403 Eif4g1Q6NZJ6 1600 aaKnown RBP13.07□□□□□ -0.32
Tro-205ENSMUST00000151403 Mier1Q5UAK0 511 aa13.05□□□□□ -0.32
Tro-205ENSMUST00000151403 Frmpd1A2AKB4 1549 aa13.05□□□□□ -0.32
Tro-205ENSMUST00000151403 Cep162Q6ZQ06 1403 aa13.04□□□□□ -0.32
Tro-205ENSMUST00000151403 Lamc3Q9R0B6 1581 aa13.01□□□□□ -0.33
Tro-205ENSMUST00000151403 Unc13aQ4KUS2 1712 aa12.97□□□□□ -0.33
Tro-205ENSMUST00000151403 Sall2Q9QX96 1004 aa12.97□□□□□ -0.33
Tro-205ENSMUST00000151403 Ercc6F8VPZ5 1481 aa12.94□□□□□ -0.34
Tro-205ENSMUST00000151403 NrkQ9R0G8 1455 aa12.91□□□□□ -0.34
Tro-205ENSMUST00000151403 Las1lA2BE28 776 aaKnown RBP12.9□□□□□ -0.34
Tro-205ENSMUST00000151403 Camsap1A2AHC3 1581 aa12.88□□□□□ -0.35
Tro-205ENSMUST00000151403 Arhgap35Q91YM2 1499 aa12.86□□□□□ -0.35
Tro-205ENSMUST00000151403 PtprkP35822 1457 aa12.83□□□□□ -0.36
Tro-205ENSMUST00000151403 Shroom4Q1W617 1475 aa12.83□□□□□ -0.36
Tro-205ENSMUST00000151403 Thoc2B1AZI6 1594 aaKnown RBP12.83□□□□□ -0.36
Tro-205ENSMUST00000151403 Kif15Q6P9L6 1387 aa12.82□□□□□ -0.36
Tro-205ENSMUST00000151403 Map3k1P53349 1493 aa12.82□□□□□ -0.36
Tro-205ENSMUST00000151403 Anks4bQ8K3X6 423 aa12.81□□□□□ -0.36
Tro-205ENSMUST00000151403 Npm2Q80W85 207 aa12.79□□□□□ -0.36
Tro-205ENSMUST00000151403 Clip1Q922J3 1391 aa12.77□□□□□ -0.37
Tro-205ENSMUST00000151403 Grin2bQ01097 1482 aa12.77□□□□□ -0.37
Tro-205ENSMUST00000151403 Myt1lP97500 1187 aa12.75□□□□□ -0.37
Tro-205ENSMUST00000151403 UbtfP25976 765 aaKnown RBP12.75□□□□□ -0.37
Tro-205ENSMUST00000151403 Ccdc18Q640L5 1455 aa12.75□□□□□ -0.37
Tro-205ENSMUST00000151403 Phldb1Q6PDH0 1371 aaKnown RBP12.74□□□□□ -0.37
Tro-205ENSMUST00000151403 DiexfQ8BTT6 772 aaKnown RBP12.73□□□□□ -0.37
Tro-205ENSMUST00000151403 Wdr66E9Q743 1299 aa12.73□□□□□ -0.37
Tro-205ENSMUST00000151403 Aebp2Q9Z248 504 aaKnown RBP12.73□□□□□ -0.37
Tro-205ENSMUST00000151403 1700123L14RikQ3V2K7 440 aa12.71□□□□□ -0.37
Tro-205ENSMUST00000151403 Arap1Q4LDD4 1452 aa12.71□□□□□ -0.37
Tro-205ENSMUST00000151403 Fam135aQ6NS59 1506 aa12.71□□□□□ -0.38
Tro-205ENSMUST00000151403 Eea1Q8BL66 1411 aa12.7□□□□□ -0.38
Tro-205ENSMUST00000151403 AqrQ8CFQ3 1481 aaKnown RBP12.7□□□□□ -0.38
Tro-205ENSMUST00000151403 Csrnp3P59055 597 aa12.7□□□□□ -0.38
Tro-205ENSMUST00000151403 Arhgef5E9Q7D5 1581 aa12.7□□□□□ -0.38
Tro-205ENSMUST00000151403 Erich3F6QRE9 1637 aa12.69□□□□□ -0.38
Tro-205ENSMUST00000151403 Mroh2bQ7M6Y6 1581 aa12.69□□□□□ -0.38
Tro-205ENSMUST00000151403 Ncapd3Q6ZQK0 1506 aa12.69□□□□□ -0.38
Tro-205ENSMUST00000151403 ClspnQ80YR7 1315 aa12.68□□□□□ -0.38
Tro-205ENSMUST00000151403 Cdk11bP24788 784 aaKnown RBP12.64□□□□□ -0.39
Tro-205ENSMUST00000151403 Cux2P70298 1426 aa12.63□□□□□ -0.39
Tro-205ENSMUST00000151403 Ankrd26Q811D2 1581 aa12.63□□□□□ -0.39
Tro-205ENSMUST00000151403 Tiam1Q60610 1591 aa12.62□□□□□ -0.39
Tro-205ENSMUST00000151403 Nop58Q6DFW4 536 aaKnown RBP12.62□□□□□ -0.39
Tro-205ENSMUST00000151403 Il27Q8K3I6 234 aa12.61□□□□□ -0.39
Tro-205ENSMUST00000151403 Efcab5A0JP43 1406 aa12.61□□□□□ -0.39
Tro-205ENSMUST00000151403 Baz1bQ9Z277 1479 aa12.61□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 41.6 ms