RNA–Protein interactions for RNA: ENSMUST00000143047.7

Smim1-208, Transcript of Small integral membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smim1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1-208ENSMUST00000143047 NischQ80TM9 1593 aa22.85■■□□□ 1.25
Smim1-208ENSMUST00000143047 Abcc9P70170 1546 aa22.04■■□□□ 1.12
Smim1-208ENSMUST00000143047 Gm35339A0A140LHH9 1649 aa22.03■■□□□ 1.12
Smim1-208ENSMUST00000143047 Rhox8Q6VSS7 320 aa21.86■■□□□ 1.09
Smim1-208ENSMUST00000143047 Abcc8B2RUS7 1588 aa21.61■■□□□ 1.05
Smim1-208ENSMUST00000143047 Rtl1Q7M732 1744 aa20.52■□□□□ 0.88
Smim1-208ENSMUST00000143047 Ccdc180J3QNE4 1664 aa20.33■□□□□ 0.85
Smim1-208ENSMUST00000143047 Ccdc136Q3TVA9 1136 aa20.29■□□□□ 0.84
Smim1-208ENSMUST00000143047 ScribQ80U72 1612 aa20.18■□□□□ 0.82
Smim1-208ENSMUST00000143047 Zcchc6Q5BLK4 1491 aaKnown RBP20.04■□□□□ 0.8
Smim1-208ENSMUST00000143047 Rb1cc1Q9ESK9 1588 aa20.04■□□□□ 0.8
Smim1-208ENSMUST00000143047 Ehmt2Q9Z148 1263 aaKnown RBP19.95■□□□□ 0.78
Smim1-208ENSMUST00000143047 Kdm5dQ62240 1548 aa19.87■□□□□ 0.77
Smim1-208ENSMUST00000143047 Dcaf1Q80TR8 1506 aa19.86■□□□□ 0.77
Smim1-208ENSMUST00000143047 Rpgrip1Q9EPQ2 1331 aa19.7■□□□□ 0.74
Smim1-208ENSMUST00000143047 Baz1aO88379 1555 aa19.7■□□□□ 0.74
Smim1-208ENSMUST00000143047 NacadQ5SWP3 1504 aa19.62■□□□□ 0.73
Smim1-208ENSMUST00000143047 Trim41Q5NCC3 630 aa19.61■□□□□ 0.73
Smim1-208ENSMUST00000143047 HrcG5E8J6 738 aa19.55■□□□□ 0.72
Smim1-208ENSMUST00000143047 Cngb1E1AZ71 1325 aa19.38■□□□□ 0.69
Smim1-208ENSMUST00000143047 Acin1Q9JIX8 1338 aaKnown RBP19.26■□□□□ 0.67
Smim1-208ENSMUST00000143047 Gab3Q8BSM5 595 aa19.26■□□□□ 0.67
Smim1-208ENSMUST00000143047 Smarca2Q6DIC0 1577 aa19.22■□□□□ 0.67
Smim1-208ENSMUST00000143047 Sycp2Q9CUU3 1500 aa19.2■□□□□ 0.66
Smim1-208ENSMUST00000143047 Chic1Q8CBW7 227 aa19.12■□□□□ 0.65
Smim1-208ENSMUST00000143047 Crybg2B7ZCC2 1516 aa19.07■□□□□ 0.64
Smim1-208ENSMUST00000143047 Esf1Q3V1V3 845 aaKnown RBP19.06■□□□□ 0.64
Smim1-208ENSMUST00000143047 Cecr2E9Q2Z1 1453 aa19.05■□□□□ 0.64
Smim1-208ENSMUST00000143047 Cep164Q5DU05 1446 aa18.99■□□□□ 0.63
Smim1-208ENSMUST00000143047 Pcgf6Q99NA9 353 aa18.97■□□□□ 0.63
Smim1-208ENSMUST00000143047 Rsf1E9PWW9 1441 aaKnown RBP18.94■□□□□ 0.62
Smim1-208ENSMUST00000143047 Brd4Q9ESU6 1400 aaKnown RBP18.9■□□□□ 0.62
Smim1-208ENSMUST00000143047 Ccdc88bQ4QRL3 1481 aa18.83■□□□□ 0.61
Smim1-208ENSMUST00000143047 BicraF8VPZ9 1578 aa18.82■□□□□ 0.6
Smim1-208ENSMUST00000143047 Synj1Q8CHC4 1574 aa18.79■□□□□ 0.6
Smim1-208ENSMUST00000143047 Golga3P55937 1487 aa18.73■□□□□ 0.59
Smim1-208ENSMUST00000143047 CftrP26361 1476 aa18.64■□□□□ 0.57
Smim1-208ENSMUST00000143047 Myt1lP97500 1187 aa18.55■□□□□ 0.56
Smim1-208ENSMUST00000143047 Supt5hO55201 1082 aaKnown RBP18.52■□□□□ 0.56
Smim1-208ENSMUST00000143047 Zeb1Q64318 1117 aa18.51■□□□□ 0.55
Smim1-208ENSMUST00000143047 Mier1Q5UAK0 511 aa18.45■□□□□ 0.54
Smim1-208ENSMUST00000143047 UbtfP25976 765 aaKnown RBP18.43■□□□□ 0.54
Smim1-208ENSMUST00000143047 Cttnbp2B9EJA2 1648 aa18.4■□□□□ 0.54
Smim1-208ENSMUST00000143047 Npm2Q80W85 207 aa18.39■□□□□ 0.54
Smim1-208ENSMUST00000143047 Smarca4Q3TKT4 1613 aaKnown RBP18.39■□□□□ 0.53
Smim1-208ENSMUST00000143047 Cc2d2aQ8CFW7 1633 aa18.39■□□□□ 0.53
Smim1-208ENSMUST00000143047 Top2bQ64511 1612 aa18.33■□□□□ 0.52
Smim1-208ENSMUST00000143047 Neurod1Q60867 357 aa18.31■□□□□ 0.52
Smim1-208ENSMUST00000143047 Il27Q8K3I6 234 aa18.3■□□□□ 0.52
Smim1-208ENSMUST00000143047 Iqgap2Q3UQ44 1575 aa18.2■□□□□ 0.5
Smim1-208ENSMUST00000143047 Fmn1Q05860 1466 aa18.17■□□□□ 0.5
Smim1-208ENSMUST00000143047 NefmP08553 848 aa18.15■□□□□ 0.5
Smim1-208ENSMUST00000143047 Plekhg3Q4VAC9 1341 aa18.15■□□□□ 0.5
Smim1-208ENSMUST00000143047 Rapgef2Q8CHG7 1496 aa18.13■□□□□ 0.49
Smim1-208ENSMUST00000143047 Ap3b1Q9Z1T1 1105 aa18.1■□□□□ 0.49
Smim1-208ENSMUST00000143047 Cep162Q6ZQ06 1403 aa18.08■□□□□ 0.49
Smim1-208ENSMUST00000143047 Las1lA2BE28 776 aaKnown RBP18.07■□□□□ 0.48
Smim1-208ENSMUST00000143047 Atad2bE9Q166 1460 aaKnown RBP18.06■□□□□ 0.48
Smim1-208ENSMUST00000143047 Ppargc1bQ8VHJ7 1014 aa18.06■□□□□ 0.48
Smim1-208ENSMUST00000143047 Top2aQ01320 1528 aaKnown RBP18.05■□□□□ 0.48
Smim1-208ENSMUST00000143047 Wdr66E9Q743 1299 aa18.02■□□□□ 0.48
Smim1-208ENSMUST00000143047 Sall2Q9QX96 1004 aa18■□□□□ 0.47
Smim1-208ENSMUST00000143047 Clip1Q922J3 1391 aa17.98■□□□□ 0.47
Smim1-208ENSMUST00000143047 Pds5bQ4VA53 1446 aaKnown RBP17.98■□□□□ 0.47
Smim1-208ENSMUST00000143047 Kif15Q6P9L6 1387 aa17.92■□□□□ 0.46
Smim1-208ENSMUST00000143047 Frmpd1A2AKB4 1549 aa17.88■□□□□ 0.45
Smim1-208ENSMUST00000143047 Aebp2Q9Z248 504 aaKnown RBP17.87■□□□□ 0.45
Smim1-208ENSMUST00000143047 PtprkP35822 1457 aa17.86■□□□□ 0.45
Smim1-208ENSMUST00000143047 1700123L14RikQ3V2K7 440 aa17.8■□□□□ 0.44
Smim1-208ENSMUST00000143047 Csrnp3P59055 597 aa17.78■□□□□ 0.44
Smim1-208ENSMUST00000143047 Ercc6F8VPZ5 1481 aa17.76■□□□□ 0.43
Smim1-208ENSMUST00000143047 Wdr62Q3U3T8 1523 aa17.76■□□□□ 0.43
Smim1-208ENSMUST00000143047 Eid3Q3V124 375 aa17.75■□□□□ 0.43
Smim1-208ENSMUST00000143047 Arhgap35Q91YM2 1499 aa17.73■□□□□ 0.43
Smim1-208ENSMUST00000143047 Lmod2Q3UHZ5 550 aa17.71■□□□□ 0.43
Smim1-208ENSMUST00000143047 Setd5Q5XJV7 1441 aa17.7■□□□□ 0.42
Smim1-208ENSMUST00000143047 Ubl4bQ9CQ84 188 aa17.7■□□□□ 0.42
Smim1-208ENSMUST00000143047 TonslQ6NZL6 1363 aa17.69■□□□□ 0.42
Smim1-208ENSMUST00000143047 TnnQ80Z71 1560 aa17.68■□□□□ 0.42
Smim1-208ENSMUST00000143047 Npm1Q61937 292 aaKnown RBP17.66■□□□□ 0.42
Smim1-208ENSMUST00000143047 Anks4bQ8K3X6 423 aa17.65■□□□□ 0.42
Smim1-208ENSMUST00000143047 Eea1Q8BL66 1411 aa17.64■□□□□ 0.41
Smim1-208ENSMUST00000143047 Arap1Q4LDD4 1452 aa17.62■□□□□ 0.41
Smim1-208ENSMUST00000143047 Eif4g1Q6NZJ6 1600 aaKnown RBP17.62■□□□□ 0.41
Smim1-208ENSMUST00000143047 Lamc3Q9R0B6 1581 aa17.62■□□□□ 0.41
Smim1-208ENSMUST00000143047 Fam50aQ9WV03 339 aaKnown RBP17.6■□□□□ 0.41
Smim1-208ENSMUST00000143047 Ccdc18Q640L5 1455 aa17.58■□□□□ 0.41
Smim1-208ENSMUST00000143047 Camsap1A2AHC3 1581 aa17.58■□□□□ 0.4
Smim1-208ENSMUST00000143047 Shroom4Q1W617 1475 aa17.58■□□□□ 0.4
Smim1-208ENSMUST00000143047 Unc13aQ4KUS2 1712 aa17.56■□□□□ 0.4
Smim1-208ENSMUST00000143047 NrkQ9R0G8 1455 aa17.56■□□□□ 0.4
Smim1-208ENSMUST00000143047 Cux2P70298 1426 aa17.56■□□□□ 0.4
Smim1-208ENSMUST00000143047 Baz1bQ9Z277 1479 aa17.56■□□□□ 0.4
Smim1-208ENSMUST00000143047 BlmO88700 1416 aa17.55■□□□□ 0.4
Smim1-208ENSMUST00000143047 CenpbP27790 599 aa17.53■□□□□ 0.4
Smim1-208ENSMUST00000143047 ClspnQ80YR7 1315 aa17.52■□□□□ 0.4
Smim1-208ENSMUST00000143047 Ncapd3Q6ZQK0 1506 aa17.52■□□□□ 0.4
Smim1-208ENSMUST00000143047 Ube2uB1AUC4 352 aa17.51■□□□□ 0.39
Smim1-208ENSMUST00000143047 Grin2bQ01097 1482 aa17.5■□□□□ 0.39
Smim1-208ENSMUST00000143047 Gm38655A0A286YDK6 273 aa17.5■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 85.8 ms