RNA–Protein interactions for RNA: ENSMUST00000127569.7

Usp3-205, Transcript of Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp3, Length 5,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3-205ENSMUST00000127569 Rhox8Q6VSS7 320 aa22.52■■□□□ 1.2
Usp3-205ENSMUST00000127569 NischQ80TM9 1593 aa21.14■□□□□ 0.97
Usp3-205ENSMUST00000127569 Ccdc136Q3TVA9 1136 aa20.28■□□□□ 0.84
Usp3-205ENSMUST00000127569 Esf1Q3V1V3 845 aaKnown RBP19.96■□□□□ 0.79
Usp3-205ENSMUST00000127569 Cngb1E1AZ71 1325 aa19.91■□□□□ 0.78
Usp3-205ENSMUST00000127569 Abcc9P70170 1546 aa19.89■□□□□ 0.78
Usp3-205ENSMUST00000127569 Trim41Q5NCC3 630 aa19.87■□□□□ 0.77
Usp3-205ENSMUST00000127569 Ehmt2Q9Z148 1263 aaKnown RBP19.78■□□□□ 0.76
Usp3-205ENSMUST00000127569 Rpgrip1Q9EPQ2 1331 aa19.7■□□□□ 0.74
Usp3-205ENSMUST00000127569 Gab3Q8BSM5 595 aa19.56■□□□□ 0.72
Usp3-205ENSMUST00000127569 Abcc8B2RUS7 1588 aa19.54■□□□□ 0.72
Usp3-205ENSMUST00000127569 Npm2Q80W85 207 aa19.34■□□□□ 0.69
Usp3-205ENSMUST00000127569 Zeb1Q64318 1117 aa19.31■□□□□ 0.68
Usp3-205ENSMUST00000127569 Gm35339A0A140LHH9 1649 aa19.24■□□□□ 0.67
Usp3-205ENSMUST00000127569 Ccdc180J3QNE4 1664 aa19.23■□□□□ 0.67
Usp3-205ENSMUST00000127569 Zcchc6Q5BLK4 1491 aaKnown RBP19.23■□□□□ 0.67
Usp3-205ENSMUST00000127569 Myt1lP97500 1187 aa19.19■□□□□ 0.66
Usp3-205ENSMUST00000127569 Rtl1Q7M732 1744 aa19.17■□□□□ 0.66
Usp3-205ENSMUST00000127569 HrcG5E8J6 738 aa19.07■□□□□ 0.64
Usp3-205ENSMUST00000127569 Las1lA2BE28 776 aaKnown RBP18.96■□□□□ 0.63
Usp3-205ENSMUST00000127569 Ube2uB1AUC4 352 aa18.94■□□□□ 0.62
Usp3-205ENSMUST00000127569 Wdr66E9Q743 1299 aa18.87■□□□□ 0.61
Usp3-205ENSMUST00000127569 Il27Q8K3I6 234 aa18.86■□□□□ 0.61
Usp3-205ENSMUST00000127569 Acin1Q9JIX8 1338 aaKnown RBP18.73■□□□□ 0.59
Usp3-205ENSMUST00000127569 UbtfP25976 765 aaKnown RBP18.72■□□□□ 0.59
Usp3-205ENSMUST00000127569 Rb1cc1Q9ESK9 1588 aa18.56■□□□□ 0.56
Usp3-205ENSMUST00000127569 NefmP08553 848 aa18.54■□□□□ 0.56
Usp3-205ENSMUST00000127569 NacadQ5SWP3 1504 aa18.42■□□□□ 0.54
Usp3-205ENSMUST00000127569 Ap3b1Q9Z1T1 1105 aa18.39■□□□□ 0.53
Usp3-205ENSMUST00000127569 Brd4Q9ESU6 1400 aaKnown RBP18.38■□□□□ 0.53
Usp3-205ENSMUST00000127569 Npm1Q61937 292 aaKnown RBP18.29■□□□□ 0.52
Usp3-205ENSMUST00000127569 Dcaf1Q80TR8 1506 aa18.27■□□□□ 0.52
Usp3-205ENSMUST00000127569 Fam50aQ9WV03 339 aaKnown RBP18.18■□□□□ 0.5
Usp3-205ENSMUST00000127569 Baz1aO88379 1555 aa18.17■□□□□ 0.5
Usp3-205ENSMUST00000127569 Chic1Q8CBW7 227 aa18.11■□□□□ 0.49
Usp3-205ENSMUST00000127569 Kdm5dQ62240 1548 aa18.1■□□□□ 0.49
Usp3-205ENSMUST00000127569 Cep164Q5DU05 1446 aa18.04■□□□□ 0.48
Usp3-205ENSMUST00000127569 Mier1Q5UAK0 511 aa17.99■□□□□ 0.47
Usp3-205ENSMUST00000127569 Plekhg3Q4VAC9 1341 aa17.96■□□□□ 0.47
Usp3-205ENSMUST00000127569 Pelp1Q9DBD5 1123 aaKnown RBP17.96■□□□□ 0.47
Usp3-205ENSMUST00000127569 Ubl4bQ9CQ84 188 aa17.96■□□□□ 0.47
Usp3-205ENSMUST00000127569 Lmod2Q3UHZ5 550 aa17.94■□□□□ 0.46
Usp3-205ENSMUST00000127569 Stra8P70278 393 aa17.88■□□□□ 0.45
Usp3-205ENSMUST00000127569 NclP09405 707 aaKnown RBP17.88■□□□□ 0.45
Usp3-205ENSMUST00000127569 Neurod1Q60867 357 aa17.87■□□□□ 0.45
Usp3-205ENSMUST00000127569 Slc24a1Q91WD8 1130 aa17.86■□□□□ 0.45
Usp3-205ENSMUST00000127569 Pcgf6Q99NA9 353 aa17.85■□□□□ 0.45
Usp3-205ENSMUST00000127569 TonslQ6NZL6 1363 aa17.85■□□□□ 0.45
Usp3-205ENSMUST00000127569 Clip1Q922J3 1391 aa17.8■□□□□ 0.44
Usp3-205ENSMUST00000127569 Golga3P55937 1487 aa17.78■□□□□ 0.44
Usp3-205ENSMUST00000127569 Cdk11bP24788 784 aaKnown RBP17.74■□□□□ 0.43
Usp3-205ENSMUST00000127569 Ppargc1bQ8VHJ7 1014 aa17.74■□□□□ 0.43
Usp3-205ENSMUST00000127569 CenpbP27790 599 aa17.73■□□□□ 0.43
Usp3-205ENSMUST00000127569 Supt5hO55201 1082 aaKnown RBP17.68■□□□□ 0.42
Usp3-205ENSMUST00000127569 Sycp2Q9CUU3 1500 aa17.65■□□□□ 0.42
Usp3-205ENSMUST00000127569 Rsf1E9PWW9 1441 aaKnown RBP17.65■□□□□ 0.42
Usp3-205ENSMUST00000127569 Kif15Q6P9L6 1387 aa17.64■□□□□ 0.41
Usp3-205ENSMUST00000127569 Ercc6F8VPZ5 1481 aa17.64■□□□□ 0.41
Usp3-205ENSMUST00000127569 Os9Q8K2C7 672 aa17.64■□□□□ 0.41
Usp3-205ENSMUST00000127569 Nop58Q6DFW4 536 aaKnown RBP17.62■□□□□ 0.41
Usp3-205ENSMUST00000127569 Zbtb7cQ8VCZ7 619 aa17.61■□□□□ 0.41
Usp3-205ENSMUST00000127569 Ifnlr1Q8CGK5 535 aa17.6■□□□□ 0.41
Usp3-205ENSMUST00000127569 NrdcQ8BHG1 1161 aa17.58■□□□□ 0.41
Usp3-205ENSMUST00000127569 ScribQ80U72 1612 aa17.58■□□□□ 0.4
Usp3-205ENSMUST00000127569 Anp32bQ9EST5 272 aaKnown RBP17.58■□□□□ 0.4
Usp3-205ENSMUST00000127569 Fkbp15Q6P9Q6 1216 aaKnown RBP17.56■□□□□ 0.4
Usp3-205ENSMUST00000127569 Hnrnpul2Q00PI9 745 aaKnown RBP17.52■□□□□ 0.4
Usp3-205ENSMUST00000127569 Crybg2B7ZCC2 1516 aa17.51■□□□□ 0.39
Usp3-205ENSMUST00000127569 Pds5bQ4VA53 1446 aaKnown RBP17.5■□□□□ 0.39
Usp3-205ENSMUST00000127569 Eid3Q3V124 375 aa17.49■□□□□ 0.39
Usp3-205ENSMUST00000127569 Ccdc18Q640L5 1455 aa17.46■□□□□ 0.39
Usp3-205ENSMUST00000127569 Setd5Q5XJV7 1441 aa17.44■□□□□ 0.38
Usp3-205ENSMUST00000127569 BlmO88700 1416 aa17.43■□□□□ 0.38
Usp3-205ENSMUST00000127569 ClspnQ80YR7 1315 aa17.41■□□□□ 0.38
Usp3-205ENSMUST00000127569 Tnnt3Q9QZ47 272 aa17.38■□□□□ 0.37
Usp3-205ENSMUST00000127569 Ccer2J3QPU5 274 aa17.36■□□□□ 0.37
Usp3-205ENSMUST00000127569 Eif5bQ05D44 1216 aaKnown RBP17.34■□□□□ 0.37
Usp3-205ENSMUST00000127569 Cecr2E9Q2Z1 1453 aa17.33■□□□□ 0.36
Usp3-205ENSMUST00000127569 Chic2Q9D9G3 165 aa17.32■□□□□ 0.36
Usp3-205ENSMUST00000127569 Ccdc88bQ4QRL3 1481 aa17.31■□□□□ 0.36
Usp3-205ENSMUST00000127569 Erich6D3Z6S9 713 aa17.31■□□□□ 0.36
Usp3-205ENSMUST00000127569 Smarca2Q6DIC0 1577 aa17.31■□□□□ 0.36
Usp3-205ENSMUST00000127569 CftrP26361 1476 aa17.29■□□□□ 0.36
Usp3-205ENSMUST00000127569 Eea1Q8BL66 1411 aa17.27■□□□□ 0.36
Usp3-205ENSMUST00000127569 Gm13697A2AK42 830 aa17.27■□□□□ 0.35
Usp3-205ENSMUST00000127569 Fmn1Q05860 1466 aa17.26■□□□□ 0.35
Usp3-205ENSMUST00000127569 Zbtb4Q5F293 982 aa17.24■□□□□ 0.35
Usp3-205ENSMUST00000127569 Mapk8ip2Q9ERE9 830 aa17.22■□□□□ 0.35
Usp3-205ENSMUST00000127569 Sall2Q9QX96 1004 aa17.2■□□□□ 0.34
Usp3-205ENSMUST00000127569 Hdac5Q9Z2V6 1113 aa17.2■□□□□ 0.34
Usp3-205ENSMUST00000127569 NeflP08551 543 aa17.19■□□□□ 0.34
Usp3-205ENSMUST00000127569 Amer1Q7TS75 1132 aa17.18■□□□□ 0.34
Usp3-205ENSMUST00000127569 Arhgap27A2AB59 869 aa17.16■□□□□ 0.34
Usp3-205ENSMUST00000127569 Synj1Q8CHC4 1574 aa17.16■□□□□ 0.34
Usp3-205ENSMUST00000127569 Atad2bE9Q166 1460 aaKnown RBP17.16■□□□□ 0.34
Usp3-205ENSMUST00000127569 Atp1b4Q99ME6 356 aa17.14■□□□□ 0.33
Usp3-205ENSMUST00000127569 Smarca4Q3TKT4 1613 aaKnown RBP17.11■□□□□ 0.33
Usp3-205ENSMUST00000127569 Cep162Q6ZQ06 1403 aa17.11■□□□□ 0.33
Usp3-205ENSMUST00000127569 Ttbk1Q6PCN3 1308 aa17.08■□□□□ 0.32
Usp3-205ENSMUST00000127569 Clstn2Q9ER65 966 aa17.07■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 8.9 ms