RNA–Protein interactions for RNA: ENSMUST00000124488.6

Trdmt1-202, Transcript of tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trdmt1, Length 3,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1-202ENSMUST00000124488 NischQ80TM9 1593 aa14.9□□□□□ -0.02
Trdmt1-202ENSMUST00000124488 Gm35339A0A140LHH9 1649 aa14.46□□□□□ -0.09
Trdmt1-202ENSMUST00000124488 Abcc9P70170 1546 aa14.34□□□□□ -0.11
Trdmt1-202ENSMUST00000124488 Abcc8B2RUS7 1588 aa14.14□□□□□ -0.15
Trdmt1-202ENSMUST00000124488 Rhox8Q6VSS7 320 aa14.07□□□□□ -0.16
Trdmt1-202ENSMUST00000124488 ScribQ80U72 1612 aa13.28□□□□□ -0.28
Trdmt1-202ENSMUST00000124488 Kdm5dQ62240 1548 aa13.06□□□□□ -0.32
Trdmt1-202ENSMUST00000124488 Ccdc136Q3TVA9 1136 aa13.05□□□□□ -0.32
Trdmt1-202ENSMUST00000124488 Rb1cc1Q9ESK9 1588 aa13.04□□□□□ -0.32
Trdmt1-202ENSMUST00000124488 Dcaf1Q80TR8 1506 aa13□□□□□ -0.33
Trdmt1-202ENSMUST00000124488 Rtl1Q7M732 1744 aa12.99□□□□□ -0.33
Trdmt1-202ENSMUST00000124488 NacadQ5SWP3 1504 aa12.98□□□□□ -0.33
Trdmt1-202ENSMUST00000124488 Zcchc6Q5BLK4 1491 aaKnown RBP12.86□□□□□ -0.35
Trdmt1-202ENSMUST00000124488 Baz1aO88379 1555 aa12.83□□□□□ -0.36
Trdmt1-202ENSMUST00000124488 Ccdc180J3QNE4 1664 aa12.81□□□□□ -0.36
Trdmt1-202ENSMUST00000124488 Sycp2Q9CUU3 1500 aa12.68□□□□□ -0.38
Trdmt1-202ENSMUST00000124488 Trim41Q5NCC3 630 aa12.62□□□□□ -0.39
Trdmt1-202ENSMUST00000124488 Cngb1E1AZ71 1325 aa12.51□□□□□ -0.41
Trdmt1-202ENSMUST00000124488 Crybg2B7ZCC2 1516 aa12.51□□□□□ -0.41
Trdmt1-202ENSMUST00000124488 Smarca2Q6DIC0 1577 aa12.47□□□□□ -0.41
Trdmt1-202ENSMUST00000124488 Esf1Q3V1V3 845 aaKnown RBP12.46□□□□□ -0.41
Trdmt1-202ENSMUST00000124488 BicraF8VPZ9 1578 aa12.41□□□□□ -0.42
Trdmt1-202ENSMUST00000124488 Cecr2E9Q2Z1 1453 aa12.4□□□□□ -0.42
Trdmt1-202ENSMUST00000124488 HrcG5E8J6 738 aa12.38□□□□□ -0.43
Trdmt1-202ENSMUST00000124488 Ehmt2Q9Z148 1263 aaKnown RBP12.33□□□□□ -0.44
Trdmt1-202ENSMUST00000124488 Brd4Q9ESU6 1400 aaKnown RBP12.31□□□□□ -0.44
Trdmt1-202ENSMUST00000124488 Gab3Q8BSM5 595 aa12.29□□□□□ -0.44
Trdmt1-202ENSMUST00000124488 Chic1Q8CBW7 227 aa12.21□□□□□ -0.46
Trdmt1-202ENSMUST00000124488 Synj1Q8CHC4 1574 aa12.2□□□□□ -0.46
Trdmt1-202ENSMUST00000124488 CftrP26361 1476 aa12.14□□□□□ -0.47
Trdmt1-202ENSMUST00000124488 Smarca4Q3TKT4 1613 aaKnown RBP12.11□□□□□ -0.47
Trdmt1-202ENSMUST00000124488 Golga3P55937 1487 aa12.1□□□□□ -0.47
Trdmt1-202ENSMUST00000124488 Rsf1E9PWW9 1441 aaKnown RBP12.07□□□□□ -0.48
Trdmt1-202ENSMUST00000124488 Cep164Q5DU05 1446 aa12.05□□□□□ -0.48
Trdmt1-202ENSMUST00000124488 Ccdc88bQ4QRL3 1481 aa12.04□□□□□ -0.48
Trdmt1-202ENSMUST00000124488 Cttnbp2B9EJA2 1648 aa12.02□□□□□ -0.49
Trdmt1-202ENSMUST00000124488 Pds5bQ4VA53 1446 aaKnown RBP12.02□□□□□ -0.49
Trdmt1-202ENSMUST00000124488 Atad2bE9Q166 1460 aaKnown RBP12□□□□□ -0.49
Trdmt1-202ENSMUST00000124488 Iqgap2Q3UQ44 1575 aa11.99□□□□□ -0.49
Trdmt1-202ENSMUST00000124488 Il27Q8K3I6 234 aa11.98□□□□□ -0.49
Trdmt1-202ENSMUST00000124488 Myt1lP97500 1187 aa11.93□□□□□ -0.5
Trdmt1-202ENSMUST00000124488 Npm2Q80W85 207 aa11.92□□□□□ -0.5
Trdmt1-202ENSMUST00000124488 Ercc6F8VPZ5 1481 aa11.86□□□□□ -0.51
Trdmt1-202ENSMUST00000124488 Cc2d2aQ8CFW7 1633 aa11.85□□□□□ -0.51
Trdmt1-202ENSMUST00000124488 Top2bQ64511 1612 aa11.83□□□□□ -0.52
Trdmt1-202ENSMUST00000124488 Frmpd1A2AKB4 1549 aa11.81□□□□□ -0.52
Trdmt1-202ENSMUST00000124488 Ubl4bQ9CQ84 188 aa11.79□□□□□ -0.52
Trdmt1-202ENSMUST00000124488 Fmn1Q05860 1466 aa11.79□□□□□ -0.52
Trdmt1-202ENSMUST00000124488 Kif15Q6P9L6 1387 aa11.79□□□□□ -0.52
Trdmt1-202ENSMUST00000124488 Zeb1Q64318 1117 aa11.78□□□□□ -0.52
Trdmt1-202ENSMUST00000124488 Acin1Q9JIX8 1338 aaKnown RBP11.77□□□□□ -0.52
Trdmt1-202ENSMUST00000124488 Wdr62Q3U3T8 1523 aa11.74□□□□□ -0.53
Trdmt1-202ENSMUST00000124488 Rpgrip1Q9EPQ2 1331 aa11.71□□□□□ -0.53
Trdmt1-202ENSMUST00000124488 Npm1Q61937 292 aaKnown RBP11.7□□□□□ -0.54
Trdmt1-202ENSMUST00000124488 UbtfP25976 765 aaKnown RBP11.66□□□□□ -0.54
Trdmt1-202ENSMUST00000124488 Phldb1Q6PDH0 1371 aaKnown RBP11.65□□□□□ -0.54
Trdmt1-202ENSMUST00000124488 Top2aQ01320 1528 aaKnown RBP11.63□□□□□ -0.55
Trdmt1-202ENSMUST00000124488 Ap3b1Q9Z1T1 1105 aa11.63□□□□□ -0.55
Trdmt1-202ENSMUST00000124488 Dnajc5bQ9CQ94 199 aa11.62□□□□□ -0.55
Trdmt1-202ENSMUST00000124488 Rapgef2Q8CHG7 1496 aa11.61□□□□□ -0.55
Trdmt1-202ENSMUST00000124488 Cux2P70298 1426 aa11.59□□□□□ -0.55
Trdmt1-202ENSMUST00000124488 Cep162Q6ZQ06 1403 aa11.59□□□□□ -0.55
Trdmt1-202ENSMUST00000124488 Ccdc18Q640L5 1455 aa11.57□□□□□ -0.56
Trdmt1-202ENSMUST00000124488 Plekhg3Q4VAC9 1341 aa11.55□□□□□ -0.56
Trdmt1-202ENSMUST00000124488 Lamc3Q9R0B6 1581 aa11.55□□□□□ -0.56
Trdmt1-202ENSMUST00000124488 Unc13aQ4KUS2 1712 aa11.54□□□□□ -0.56
Trdmt1-202ENSMUST00000124488 Thoc2B1AZI6 1594 aaKnown RBP11.54□□□□□ -0.56
Trdmt1-202ENSMUST00000124488 PtprkP35822 1457 aa11.52□□□□□ -0.57
Trdmt1-202ENSMUST00000124488 Mier1Q5UAK0 511 aa11.52□□□□□ -0.57
Trdmt1-202ENSMUST00000124488 Clip1Q922J3 1391 aa11.52□□□□□ -0.57
Trdmt1-202ENSMUST00000124488 TnnQ80Z71 1560 aa11.51□□□□□ -0.57
Trdmt1-202ENSMUST00000124488 Camsap1A2AHC3 1581 aa11.48□□□□□ -0.57
Trdmt1-202ENSMUST00000124488 LrpprcQ6PB66 1392 aaKnown RBP11.43□□□□□ -0.58
Trdmt1-202ENSMUST00000124488 Grin2bQ01097 1482 aa11.42□□□□□ -0.58
Trdmt1-202ENSMUST00000124488 Shroom4Q1W617 1475 aa11.41□□□□□ -0.58
Trdmt1-202ENSMUST00000124488 Arhgap35Q91YM2 1499 aa11.41□□□□□ -0.58
Trdmt1-202ENSMUST00000124488 Fam135aQ6NS59 1506 aa11.41□□□□□ -0.58
Trdmt1-202ENSMUST00000124488 Baz1bQ9Z277 1479 aa11.41□□□□□ -0.58
Trdmt1-202ENSMUST00000124488 Lmod2Q3UHZ5 550 aa11.4□□□□□ -0.58
Trdmt1-202ENSMUST00000124488 Setd5Q5XJV7 1441 aa11.4□□□□□ -0.58
Trdmt1-202ENSMUST00000124488 Dhx29Q6PGC1 1365 aaKnown RBP11.38□□□□□ -0.59
Trdmt1-202ENSMUST00000124488 NrkQ9R0G8 1455 aa11.38□□□□□ -0.59
Trdmt1-202ENSMUST00000124488 Eea1Q8BL66 1411 aa11.35□□□□□ -0.59
Trdmt1-202ENSMUST00000124488 Duox2A2AQ99 1517 aa11.34□□□□□ -0.59
Trdmt1-202ENSMUST00000124488 PogzQ8BZH4 1409 aaKnown RBP11.33□□□□□ -0.6
Trdmt1-202ENSMUST00000124488 Mrc2Q64449 1479 aa11.32□□□□□ -0.6
Trdmt1-202ENSMUST00000124488 NefmP08553 848 aa11.31□□□□□ -0.6
Trdmt1-202ENSMUST00000124488 Efcab5A0JP43 1406 aa11.31□□□□□ -0.6
Trdmt1-202ENSMUST00000124488 Rad54l2Q99NG0 1466 aa11.3□□□□□ -0.6
Trdmt1-202ENSMUST00000124488 Mroh2bQ7M6Y6 1581 aa11.29□□□□□ -0.6
Trdmt1-202ENSMUST00000124488 BlmO88700 1416 aa11.28□□□□□ -0.6
Trdmt1-202ENSMUST00000124488 Eif4g1Q6NZJ6 1600 aaKnown RBP11.26□□□□□ -0.61
Trdmt1-202ENSMUST00000124488 Fam50aQ9WV03 339 aaKnown RBP11.25□□□□□ -0.61
Trdmt1-202ENSMUST00000124488 Arap1Q4LDD4 1452 aa11.25□□□□□ -0.61
Trdmt1-202ENSMUST00000124488 Carmil1Q6EDY6 1374 aa11.25□□□□□ -0.61
Trdmt1-202ENSMUST00000124488 Kif21aQ9QXL2 1672 aa11.23□□□□□ -0.61
Trdmt1-202ENSMUST00000124488 Map3k1P53349 1493 aa11.23□□□□□ -0.61
Trdmt1-202ENSMUST00000124488 Plb1Q3TTY0 1478 aa11.21□□□□□ -0.61
Trdmt1-202ENSMUST00000124488 Crocc2F6XLV1 1638 aa11.21□□□□□ -0.61
Trdmt1-202ENSMUST00000124488 Samd9lQ69Z37 1561 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms