RNA–Protein interactions for RNA: ENSMUST00000121304.1

Smarcb1-202, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Smarcb1, Length 1,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1-202ENSMUST00000121304 Gm35339A0A140LHH9 1649 aa27.04■■□□□ 1.92
Smarcb1-202ENSMUST00000121304 NischQ80TM9 1593 aa26.72■■□□□ 1.87
Smarcb1-202ENSMUST00000121304 Abcc9P70170 1546 aa25.9■■□□□ 1.74
Smarcb1-202ENSMUST00000121304 Abcc8B2RUS7 1588 aa25.82■■□□□ 1.72
Smarcb1-202ENSMUST00000121304 ScribQ80U72 1612 aa24.86■■□□□ 1.57
Smarcb1-202ENSMUST00000121304 Kdm5dQ62240 1548 aa24.04■■□□□ 1.44
Smarcb1-202ENSMUST00000121304 NacadQ5SWP3 1504 aa24.03■■□□□ 1.44
Smarcb1-202ENSMUST00000121304 Dcaf1Q80TR8 1506 aa23.78■■□□□ 1.4
Smarcb1-202ENSMUST00000121304 Sycp2Q9CUU3 1500 aa23.58■■□□□ 1.36
Smarcb1-202ENSMUST00000121304 Rb1cc1Q9ESK9 1588 aa23.3■■□□□ 1.32
Smarcb1-202ENSMUST00000121304 BicraF8VPZ9 1578 aa23.26■■□□□ 1.31
Smarcb1-202ENSMUST00000121304 Rhox8Q6VSS7 320 aa23.11■■□□□ 1.29
Smarcb1-202ENSMUST00000121304 Baz1aO88379 1555 aa22.97■■□□□ 1.27
Smarcb1-202ENSMUST00000121304 Ccdc180J3QNE4 1664 aa22.96■■□□□ 1.27
Smarcb1-202ENSMUST00000121304 Crybg2B7ZCC2 1516 aa22.86■■□□□ 1.25
Smarcb1-202ENSMUST00000121304 Zcchc6Q5BLK4 1491 aaKnown RBP22.59■■□□□ 1.21
Smarcb1-202ENSMUST00000121304 Pds5bQ4VA53 1446 aaKnown RBP22.51■■□□□ 1.19
Smarcb1-202ENSMUST00000121304 Dnajc5bQ9CQ94 199 aa22.43■■□□□ 1.18
Smarcb1-202ENSMUST00000121304 Atad2bE9Q166 1460 aaKnown RBP22.34■■□□□ 1.17
Smarcb1-202ENSMUST00000121304 Smarca2Q6DIC0 1577 aa22.34■■□□□ 1.17
Smarcb1-202ENSMUST00000121304 Thoc2B1AZI6 1594 aaKnown RBP22.33■■□□□ 1.17
Smarcb1-202ENSMUST00000121304 Cecr2E9Q2Z1 1453 aa22.23■■□□□ 1.15
Smarcb1-202ENSMUST00000121304 Smarca4Q3TKT4 1613 aaKnown RBP22.21■■□□□ 1.15
Smarcb1-202ENSMUST00000121304 Iqgap2Q3UQ44 1575 aa22.08■■□□□ 1.13
Smarcb1-202ENSMUST00000121304 Ercc6F8VPZ5 1481 aa22.02■■□□□ 1.12
Smarcb1-202ENSMUST00000121304 Rtl1Q7M732 1744 aa22■■□□□ 1.11
Smarcb1-202ENSMUST00000121304 Cc2d2aQ8CFW7 1633 aa21.95■■□□□ 1.1
Smarcb1-202ENSMUST00000121304 Wdr62Q3U3T8 1523 aa21.89■■□□□ 1.09
Smarcb1-202ENSMUST00000121304 Frmpd1A2AKB4 1549 aa21.86■■□□□ 1.09
Smarcb1-202ENSMUST00000121304 Fam135aQ6NS59 1506 aa21.84■■□□□ 1.09
Smarcb1-202ENSMUST00000121304 CftrP26361 1476 aa21.74■■□□□ 1.07
Smarcb1-202ENSMUST00000121304 Synj1Q8CHC4 1574 aa21.7■■□□□ 1.06
Smarcb1-202ENSMUST00000121304 Cttnbp2B9EJA2 1648 aa21.68■■□□□ 1.06
Smarcb1-202ENSMUST00000121304 Phldb1Q6PDH0 1371 aaKnown RBP21.67■■□□□ 1.06
Smarcb1-202ENSMUST00000121304 Brd4Q9ESU6 1400 aaKnown RBP21.66■■□□□ 1.06
Smarcb1-202ENSMUST00000121304 Ccdc136Q3TVA9 1136 aa21.64■■□□□ 1.05
Smarcb1-202ENSMUST00000121304 Unc13aQ4KUS2 1712 aa21.57■■□□□ 1.04
Smarcb1-202ENSMUST00000121304 Baz1bQ9Z277 1479 aa21.53■■□□□ 1.04
Smarcb1-202ENSMUST00000121304 Ubl4bQ9CQ84 188 aa21.43■■□□□ 1.02
Smarcb1-202ENSMUST00000121304 Mrc2Q64449 1479 aa21.3■■□□□ 1
Smarcb1-202ENSMUST00000121304 Trim41Q5NCC3 630 aa21.27■■□□□ 1
Smarcb1-202ENSMUST00000121304 Esf1Q3V1V3 845 aaKnown RBP21.23■□□□□ 0.99
Smarcb1-202ENSMUST00000121304 Rsf1E9PWW9 1441 aaKnown RBP21.12■□□□□ 0.97
Smarcb1-202ENSMUST00000121304 Kif15Q6P9L6 1387 aa21.08■□□□□ 0.96
Smarcb1-202ENSMUST00000121304 Lamc3Q9R0B6 1581 aa21.06■□□□□ 0.96
Smarcb1-202ENSMUST00000121304 Cux2P70298 1426 aa21.05■□□□□ 0.96
Smarcb1-202ENSMUST00000121304 Golga3P55937 1487 aa20.96■□□□□ 0.95
Smarcb1-202ENSMUST00000121304 Top2bQ64511 1612 aa20.96■□□□□ 0.95
Smarcb1-202ENSMUST00000121304 TnnQ80Z71 1560 aa20.88■□□□□ 0.93
Smarcb1-202ENSMUST00000121304 Kif21aQ9QXL2 1672 aa20.87■□□□□ 0.93
Smarcb1-202ENSMUST00000121304 Lrriq1Q0P5X1 1673 aa20.83■□□□□ 0.93
Smarcb1-202ENSMUST00000121304 Cngb1E1AZ71 1325 aa20.81■□□□□ 0.92
Smarcb1-202ENSMUST00000121304 Npm1Q61937 292 aaKnown RBP20.76■□□□□ 0.91
Smarcb1-202ENSMUST00000121304 Cep164Q5DU05 1446 aa20.74■□□□□ 0.91
Smarcb1-202ENSMUST00000121304 Camsap1A2AHC3 1581 aa20.7■□□□□ 0.9
Smarcb1-202ENSMUST00000121304 Fmn1Q05860 1466 aa20.7■□□□□ 0.9
Smarcb1-202ENSMUST00000121304 Ccdc18Q640L5 1455 aa20.69■□□□□ 0.9
Smarcb1-202ENSMUST00000121304 Il27Q8K3I6 234 aa20.62■□□□□ 0.89
Smarcb1-202ENSMUST00000121304 Dhx29Q6PGC1 1365 aaKnown RBP20.62■□□□□ 0.89
Smarcb1-202ENSMUST00000121304 LrpprcQ6PB66 1392 aaKnown RBP20.6■□□□□ 0.89
Smarcb1-202ENSMUST00000121304 Urb2E9Q7L1 1524 aaKnown RBP20.57■□□□□ 0.88
Smarcb1-202ENSMUST00000121304 Plb1Q3TTY0 1478 aa20.54■□□□□ 0.88
Smarcb1-202ENSMUST00000121304 Eif4g3Q80XI3 1579 aaKnown RBP20.53■□□□□ 0.88
Smarcb1-202ENSMUST00000121304 Crocc2F6XLV1 1638 aa20.51■□□□□ 0.87
Smarcb1-202ENSMUST00000121304 PogzQ8BZH4 1409 aaKnown RBP20.51■□□□□ 0.87
Smarcb1-202ENSMUST00000121304 Ccdc88bQ4QRL3 1481 aa20.48■□□□□ 0.87
Smarcb1-202ENSMUST00000121304 Grin2bQ01097 1482 aa20.43■□□□□ 0.86
Smarcb1-202ENSMUST00000121304 Duox2A2AQ99 1517 aa20.41■□□□□ 0.86
Smarcb1-202ENSMUST00000121304 Top2aQ01320 1528 aaKnown RBP20.36■□□□□ 0.85
Smarcb1-202ENSMUST00000121304 Ift140E9PY46 1464 aa20.34■□□□□ 0.85
Smarcb1-202ENSMUST00000121304 Chic1Q8CBW7 227 aa20.31■□□□□ 0.84
Smarcb1-202ENSMUST00000121304 Samd9lQ69Z37 1561 aa20.28■□□□□ 0.84
Smarcb1-202ENSMUST00000121304 Rusc2Q80U22 1514 aa20.27■□□□□ 0.84
Smarcb1-202ENSMUST00000121304 Efcab5A0JP43 1406 aa20.27■□□□□ 0.84
Smarcb1-202ENSMUST00000121304 Disp1Q3TDN0 1521 aa20.25■□□□□ 0.83
Smarcb1-202ENSMUST00000121304 NrkQ9R0G8 1455 aa20.22■□□□□ 0.83
Smarcb1-202ENSMUST00000121304 Shroom2A2ALU4 1481 aa20.21■□□□□ 0.83
Smarcb1-202ENSMUST00000121304 Nup160Q9Z0W3 1402 aaKnown RBP20.16■□□□□ 0.82
Smarcb1-202ENSMUST00000121304 PtprkP35822 1457 aa20.16■□□□□ 0.82
Smarcb1-202ENSMUST00000121304 Shroom4Q1W617 1475 aa20.14■□□□□ 0.81
Smarcb1-202ENSMUST00000121304 Setd1bQ8CFT2 1985 aa20.13■□□□□ 0.81
Smarcb1-202ENSMUST00000121304 Pbrm1Q8BSQ9 1634 aaKnown RBP20.12■□□□□ 0.81
Smarcb1-202ENSMUST00000121304 Rad54l2Q99NG0 1466 aa20.12■□□□□ 0.81
Smarcb1-202ENSMUST00000121304 Dnajc5P60904 198 aa20.09■□□□□ 0.81
Smarcb1-202ENSMUST00000121304 Magi3Q9EQJ9 1476 aa20.09■□□□□ 0.81
Smarcb1-202ENSMUST00000121304 Cc2d2bA0A286YDU8 1405 aa20.08■□□□□ 0.81
Smarcb1-202ENSMUST00000121304 Grin2aP35436 1464 aa20.06■□□□□ 0.8
Smarcb1-202ENSMUST00000121304 SynmQ70IV5 1561 aa20■□□□□ 0.79
Smarcb1-202ENSMUST00000121304 Gpatch8A2A6A1 1505 aa19.99■□□□□ 0.79
Smarcb1-202ENSMUST00000121304 Pla2r1Q62028 1487 aa19.98■□□□□ 0.79
Smarcb1-202ENSMUST00000121304 Pabpn1Q8CCS6 302 aaKnown RBP19.97■□□□□ 0.79
Smarcb1-202ENSMUST00000121304 AqrQ8CFQ3 1481 aaKnown RBP19.97■□□□□ 0.79
Smarcb1-202ENSMUST00000121304 HrcG5E8J6 738 aa19.94■□□□□ 0.78
Smarcb1-202ENSMUST00000121304 Col17a1Q07563 1470 aa19.91■□□□□ 0.78
Smarcb1-202ENSMUST00000121304 Mroh2bQ7M6Y6 1581 aa19.87■□□□□ 0.77
Smarcb1-202ENSMUST00000121304 Pelp1Q9DBD5 1123 aaKnown RBP19.86■□□□□ 0.77
Smarcb1-202ENSMUST00000121304 Fgd6Q69ZL1 1399 aa19.84■□□□□ 0.77
Smarcb1-202ENSMUST00000121304 Zeb1Q64318 1117 aa19.83■□□□□ 0.76
Smarcb1-202ENSMUST00000121304 Rapgef2Q8CHG7 1496 aa19.82■□□□□ 0.76
Smarcb1-202ENSMUST00000121304 Npm2Q80W85 207 aa19.8■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 240 ms