RNA–Protein interactions for RNA: ENSMUST00000119896.1

Ssr3-202, Transcript of Translocon-associated protein subunit gamma, mousemouse

TSL 1 (best) BASIC

Gene Ssr3, Length 1,469 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-202ENSMUST00000119896 Gm35339A0A140LHH9 1649 aa21.88■■□□□ 1.09
Ssr3-202ENSMUST00000119896 NischQ80TM9 1593 aa21.47■■□□□ 1.03
Ssr3-202ENSMUST00000119896 Abcc8B2RUS7 1588 aa20.89■□□□□ 0.93
Ssr3-202ENSMUST00000119896 Abcc9P70170 1546 aa20.87■□□□□ 0.93
Ssr3-202ENSMUST00000119896 ScribQ80U72 1612 aa20.36■□□□□ 0.85
Ssr3-202ENSMUST00000119896 NacadQ5SWP3 1504 aa19.67■□□□□ 0.74
Ssr3-202ENSMUST00000119896 Kdm5dQ62240 1548 aa19.61■□□□□ 0.73
Ssr3-202ENSMUST00000119896 Mapk8ip2Q9ERE9 830 aa19.4■□□□□ 0.7
Ssr3-202ENSMUST00000119896 Sycp2Q9CUU3 1500 aa19.31■□□□□ 0.68
Ssr3-202ENSMUST00000119896 Dnajc5bQ9CQ94 199 aa19.25■□□□□ 0.67
Ssr3-202ENSMUST00000119896 BicraF8VPZ9 1578 aa19.12■□□□□ 0.65
Ssr3-202ENSMUST00000119896 Dcaf1Q80TR8 1506 aa19.11■□□□□ 0.65
Ssr3-202ENSMUST00000119896 Chic1Q8CBW7 227 aa18.93■□□□□ 0.62
Ssr3-202ENSMUST00000119896 Rb1cc1Q9ESK9 1588 aa18.67■□□□□ 0.58
Ssr3-202ENSMUST00000119896 Pds5bQ4VA53 1446 aaKnown RBP18.65■□□□□ 0.58
Ssr3-202ENSMUST00000119896 Thoc2B1AZI6 1594 aaKnown RBP18.63■□□□□ 0.57
Ssr3-202ENSMUST00000119896 Atad2bE9Q166 1460 aaKnown RBP18.4■□□□□ 0.54
Ssr3-202ENSMUST00000119896 Baz1aO88379 1555 aa18.38■□□□□ 0.53
Ssr3-202ENSMUST00000119896 Crybg2B7ZCC2 1516 aa18.36■□□□□ 0.53
Ssr3-202ENSMUST00000119896 Cc2d2aQ8CFW7 1633 aa18.31■□□□□ 0.52
Ssr3-202ENSMUST00000119896 Ercc6F8VPZ5 1481 aa18.24■□□□□ 0.51
Ssr3-202ENSMUST00000119896 Ccdc180J3QNE4 1664 aa18.23■□□□□ 0.51
Ssr3-202ENSMUST00000119896 Zcchc6Q5BLK4 1491 aaKnown RBP18.21■□□□□ 0.51
Ssr3-202ENSMUST00000119896 Rhox8Q6VSS7 320 aa18.2■□□□□ 0.5
Ssr3-202ENSMUST00000119896 Fam135aQ6NS59 1506 aa18.14■□□□□ 0.49
Ssr3-202ENSMUST00000119896 Smarca2Q6DIC0 1577 aa18.14■□□□□ 0.49
Ssr3-202ENSMUST00000119896 Smarca4Q3TKT4 1613 aaKnown RBP18.07■□□□□ 0.48
Ssr3-202ENSMUST00000119896 Iqgap2Q3UQ44 1575 aa18.03■□□□□ 0.48
Ssr3-202ENSMUST00000119896 Cecr2E9Q2Z1 1453 aa17.96■□□□□ 0.47
Ssr3-202ENSMUST00000119896 Wdr62Q3U3T8 1523 aa17.96■□□□□ 0.47
Ssr3-202ENSMUST00000119896 Frmpd1A2AKB4 1549 aa17.95■□□□□ 0.46
Ssr3-202ENSMUST00000119896 Phldb1Q6PDH0 1371 aaKnown RBP17.95■□□□□ 0.46
Ssr3-202ENSMUST00000119896 Baz1bQ9Z277 1479 aa17.89■□□□□ 0.45
Ssr3-202ENSMUST00000119896 Ubl4bQ9CQ84 188 aa17.81■□□□□ 0.44
Ssr3-202ENSMUST00000119896 Dnajc5P60904 198 aa17.77■□□□□ 0.44
Ssr3-202ENSMUST00000119896 Mrc2Q64449 1479 aa17.72■□□□□ 0.43
Ssr3-202ENSMUST00000119896 Trim41Q5NCC3 630 aa17.61■□□□□ 0.41
Ssr3-202ENSMUST00000119896 Unc13aQ4KUS2 1712 aa17.6■□□□□ 0.41
Ssr3-202ENSMUST00000119896 CftrP26361 1476 aa17.46■□□□□ 0.39
Ssr3-202ENSMUST00000119896 Cttnbp2B9EJA2 1648 aa17.39■□□□□ 0.37
Ssr3-202ENSMUST00000119896 Synj1Q8CHC4 1574 aa17.37■□□□□ 0.37
Ssr3-202ENSMUST00000119896 Lrriq1Q0P5X1 1673 aa17.33■□□□□ 0.36
Ssr3-202ENSMUST00000119896 Rsf1E9PWW9 1441 aaKnown RBP17.29■□□□□ 0.36
Ssr3-202ENSMUST00000119896 Brd4Q9ESU6 1400 aaKnown RBP17.28■□□□□ 0.36
Ssr3-202ENSMUST00000119896 Cux2P70298 1426 aa17.26■□□□□ 0.35
Ssr3-202ENSMUST00000119896 Kif15Q6P9L6 1387 aa17.19■□□□□ 0.34
Ssr3-202ENSMUST00000119896 Kif21aQ9QXL2 1672 aa17.17■□□□□ 0.34
Ssr3-202ENSMUST00000119896 Esf1Q3V1V3 845 aaKnown RBP17.13■□□□□ 0.33
Ssr3-202ENSMUST00000119896 Shroom2A2ALU4 1481 aa17.13■□□□□ 0.33
Ssr3-202ENSMUST00000119896 Ccdc136Q3TVA9 1136 aa17.12■□□□□ 0.33
Ssr3-202ENSMUST00000119896 Eif4g3Q80XI3 1579 aaKnown RBP17.08■□□□□ 0.32
Ssr3-202ENSMUST00000119896 Npm1Q61937 292 aaKnown RBP17.05■□□□□ 0.32
Ssr3-202ENSMUST00000119896 Rtl1Q7M732 1744 aa17.05■□□□□ 0.32
Ssr3-202ENSMUST00000119896 Lamc3Q9R0B6 1581 aa17.01■□□□□ 0.31
Ssr3-202ENSMUST00000119896 Col17a1Q07563 1470 aa16.98■□□□□ 0.31
Ssr3-202ENSMUST00000119896 Phf23Q8BSN5 401 aa16.97■□□□□ 0.31
Ssr3-202ENSMUST00000119896 Cep164Q5DU05 1446 aa16.95■□□□□ 0.3
Ssr3-202ENSMUST00000119896 Urb2E9Q7L1 1524 aaKnown RBP16.93■□□□□ 0.3
Ssr3-202ENSMUST00000119896 Plb1Q3TTY0 1478 aa16.9■□□□□ 0.3
Ssr3-202ENSMUST00000119896 Pabpn1Q8CCS6 302 aaKnown RBP16.9■□□□□ 0.3
Ssr3-202ENSMUST00000119896 Dhx29Q6PGC1 1365 aaKnown RBP16.87■□□□□ 0.29
Ssr3-202ENSMUST00000119896 Top2bQ64511 1612 aa16.83■□□□□ 0.28
Ssr3-202ENSMUST00000119896 Il27Q8K3I6 234 aa16.8■□□□□ 0.28
Ssr3-202ENSMUST00000119896 LrpprcQ6PB66 1392 aaKnown RBP16.78■□□□□ 0.28
Ssr3-202ENSMUST00000119896 Ccdc18Q640L5 1455 aa16.77■□□□□ 0.27
Ssr3-202ENSMUST00000119896 Pelp1Q9DBD5 1123 aaKnown RBP16.76■□□□□ 0.27
Ssr3-202ENSMUST00000119896 Crocc2F6XLV1 1638 aa16.75■□□□□ 0.27
Ssr3-202ENSMUST00000119896 Rusc2Q80U22 1514 aa16.72■□□□□ 0.27
Ssr3-202ENSMUST00000119896 TnnQ80Z71 1560 aa16.7■□□□□ 0.26
Ssr3-202ENSMUST00000119896 Ift140E9PY46 1464 aa16.7■□□□□ 0.26
Ssr3-202ENSMUST00000119896 Zcchc11B2RX14 1644 aaKnown RBP16.67■□□□□ 0.26
Ssr3-202ENSMUST00000119896 Camsap1A2AHC3 1581 aa16.67■□□□□ 0.26
Ssr3-202ENSMUST00000119896 PogzQ8BZH4 1409 aaKnown RBP16.64■□□□□ 0.25
Ssr3-202ENSMUST00000119896 Disp1Q3TDN0 1521 aa16.55■□□□□ 0.24
Ssr3-202ENSMUST00000119896 Pcdh10E9PXQ7 1057 aa16.54■□□□□ 0.24
Ssr3-202ENSMUST00000119896 Duox2A2AQ99 1517 aa16.54■□□□□ 0.24
Ssr3-202ENSMUST00000119896 Golga3P55937 1487 aa16.54■□□□□ 0.24
Ssr3-202ENSMUST00000119896 Cngb1E1AZ71 1325 aa16.5■□□□□ 0.23
Ssr3-202ENSMUST00000119896 Nup160Q9Z0W3 1402 aaKnown RBP16.47■□□□□ 0.23
Ssr3-202ENSMUST00000119896 Adgrl3Q80TS3 1537 aa16.47■□□□□ 0.23
Ssr3-202ENSMUST00000119896 Cc2d2bA0A286YDU8 1405 aa16.47■□□□□ 0.23
Ssr3-202ENSMUST00000119896 Arhgef5E9Q7D5 1581 aa16.44■□□□□ 0.22
Ssr3-202ENSMUST00000119896 Grin2bQ01097 1482 aa16.42■□□□□ 0.22
Ssr3-202ENSMUST00000119896 Fmn1Q05860 1466 aa16.42■□□□□ 0.22
Ssr3-202ENSMUST00000119896 PtprkP35822 1457 aa16.42■□□□□ 0.22
Ssr3-202ENSMUST00000119896 Ttbk1Q6PCN3 1308 aa16.4■□□□□ 0.22
Ssr3-202ENSMUST00000119896 Samd9lQ69Z37 1561 aa16.4■□□□□ 0.22
Ssr3-202ENSMUST00000119896 Gm156Q58A37 223 aa16.39■□□□□ 0.21
Ssr3-202ENSMUST00000119896 Pbrm1Q8BSQ9 1634 aaKnown RBP16.38■□□□□ 0.21
Ssr3-202ENSMUST00000119896 Cep170Q6A065 1588 aa16.37■□□□□ 0.21
Ssr3-202ENSMUST00000119896 Gapvd1Q6PAR5 1458 aa16.36■□□□□ 0.21
Ssr3-202ENSMUST00000119896 Fgd6Q69ZL1 1399 aa16.36■□□□□ 0.21
Ssr3-202ENSMUST00000119896 PtprtQ99M80 1454 aa16.35■□□□□ 0.21
Ssr3-202ENSMUST00000119896 Efcab5A0JP43 1406 aa16.33■□□□□ 0.21
Ssr3-202ENSMUST00000119896 Rad54l2Q99NG0 1466 aa16.33■□□□□ 0.21
Ssr3-202ENSMUST00000119896 Setd1bQ8CFT2 1985 aa16.33■□□□□ 0.21
Ssr3-202ENSMUST00000119896 AqrQ8CFQ3 1481 aaKnown RBP16.33■□□□□ 0.2
Ssr3-202ENSMUST00000119896 Grin2aP35436 1464 aa16.3■□□□□ 0.2
Ssr3-202ENSMUST00000119896 Magi3Q9EQJ9 1476 aa16.28■□□□□ 0.2
Ssr3-202ENSMUST00000119896 AknaQ80VW7 1404 aa16.24■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 46.9 ms