RNA–Protein interactions for RNA: ENSMUST00000119084.1

Thbs3-202, Transcript of Thrombospondin-3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Thbs3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3-202ENSMUST00000119084 Gm35339A0A140LHH9 1649 aa19.63■□□□□ 0.73
Thbs3-202ENSMUST00000119084 NischQ80TM9 1593 aa19.5■□□□□ 0.71
Thbs3-202ENSMUST00000119084 Abcc9P70170 1546 aa19.01■□□□□ 0.63
Thbs3-202ENSMUST00000119084 Abcc8B2RUS7 1588 aa18.69■□□□□ 0.58
Thbs3-202ENSMUST00000119084 ScribQ80U72 1612 aa17.62■□□□□ 0.41
Thbs3-202ENSMUST00000119084 Dcaf1Q80TR8 1506 aa17.54■□□□□ 0.4
Thbs3-202ENSMUST00000119084 Rhox8Q6VSS7 320 aa17.22■□□□□ 0.35
Thbs3-202ENSMUST00000119084 Ehmt2Q9Z148 1263 aaKnown RBP17.21■□□□□ 0.35
Thbs3-202ENSMUST00000119084 Kdm5dQ62240 1548 aa17.18■□□□□ 0.34
Thbs3-202ENSMUST00000119084 NacadQ5SWP3 1504 aa17.17■□□□□ 0.34
Thbs3-202ENSMUST00000119084 Ccdc180J3QNE4 1664 aa17.16■□□□□ 0.34
Thbs3-202ENSMUST00000119084 Rtl1Q7M732 1744 aa17.13■□□□□ 0.33
Thbs3-202ENSMUST00000119084 Rb1cc1Q9ESK9 1588 aa17.05■□□□□ 0.32
Thbs3-202ENSMUST00000119084 Baz1aO88379 1555 aa16.9■□□□□ 0.3
Thbs3-202ENSMUST00000119084 Crybg2B7ZCC2 1516 aa16.83■□□□□ 0.29
Thbs3-202ENSMUST00000119084 Rpgrip1Q9EPQ2 1331 aa16.83■□□□□ 0.28
Thbs3-202ENSMUST00000119084 Sycp2Q9CUU3 1500 aa16.8■□□□□ 0.28
Thbs3-202ENSMUST00000119084 Pcgf6Q99NA9 353 aa16.64■□□□□ 0.25
Thbs3-202ENSMUST00000119084 Acin1Q9JIX8 1338 aaKnown RBP16.59■□□□□ 0.25
Thbs3-202ENSMUST00000119084 Zcchc6Q5BLK4 1491 aaKnown RBP16.5■□□□□ 0.23
Thbs3-202ENSMUST00000119084 Smarca2Q6DIC0 1577 aa16.49■□□□□ 0.23
Thbs3-202ENSMUST00000119084 BicraF8VPZ9 1578 aa16.43■□□□□ 0.22
Thbs3-202ENSMUST00000119084 Supt5hO55201 1082 aaKnown RBP16.29■□□□□ 0.2
Thbs3-202ENSMUST00000119084 Neurod1Q60867 357 aa16.16■□□□□ 0.18
Thbs3-202ENSMUST00000119084 Zeb1Q64318 1117 aa16.05■□□□□ 0.16
Thbs3-202ENSMUST00000119084 Cecr2E9Q2Z1 1453 aa16.03■□□□□ 0.16
Thbs3-202ENSMUST00000119084 Brd4Q9ESU6 1400 aaKnown RBP16.02■□□□□ 0.15
Thbs3-202ENSMUST00000119084 Ccdc136Q3TVA9 1136 aa15.99■□□□□ 0.15
Thbs3-202ENSMUST00000119084 Smarca4Q3TKT4 1613 aaKnown RBP15.98■□□□□ 0.15
Thbs3-202ENSMUST00000119084 Trim41Q5NCC3 630 aa15.95■□□□□ 0.14
Thbs3-202ENSMUST00000119084 Cttnbp2B9EJA2 1648 aa15.88■□□□□ 0.13
Thbs3-202ENSMUST00000119084 Synj1Q8CHC4 1574 aa15.88■□□□□ 0.13
Thbs3-202ENSMUST00000119084 CftrP26361 1476 aa15.86■□□□□ 0.13
Thbs3-202ENSMUST00000119084 Pds5bQ4VA53 1446 aaKnown RBP15.85■□□□□ 0.13
Thbs3-202ENSMUST00000119084 Atad2bE9Q166 1460 aaKnown RBP15.84■□□□□ 0.13
Thbs3-202ENSMUST00000119084 HrcG5E8J6 738 aa15.8■□□□□ 0.12
Thbs3-202ENSMUST00000119084 Iqgap2Q3UQ44 1575 aa15.78■□□□□ 0.12
Thbs3-202ENSMUST00000119084 Csrnp3P59055 597 aa15.75■□□□□ 0.11
Thbs3-202ENSMUST00000119084 Gm38655A0A286YDK6 273 aa15.75■□□□□ 0.11
Thbs3-202ENSMUST00000119084 1700123L14RikQ3V2K7 440 aa15.73■□□□□ 0.11
Thbs3-202ENSMUST00000119084 Cngb1E1AZ71 1325 aa15.72■□□□□ 0.11
Thbs3-202ENSMUST00000119084 Las1lA2BE28 776 aaKnown RBP15.69■□□□□ 0.1
Thbs3-202ENSMUST00000119084 Ppargc1bQ8VHJ7 1014 aa15.68■□□□□ 0.1
Thbs3-202ENSMUST00000119084 Golga3P55937 1487 aa15.67■□□□□ 0.1
Thbs3-202ENSMUST00000119084 DiexfQ8BTT6 772 aaKnown RBP15.65■□□□□ 0.1
Thbs3-202ENSMUST00000119084 Top2bQ64511 1612 aa15.64■□□□□ 0.09
Thbs3-202ENSMUST00000119084 Sall2Q9QX96 1004 aa15.57■□□□□ 0.08
Thbs3-202ENSMUST00000119084 Wdr62Q3U3T8 1523 aa15.56■□□□□ 0.08
Thbs3-202ENSMUST00000119084 Thoc2B1AZI6 1594 aaKnown RBP15.51■□□□□ 0.07
Thbs3-202ENSMUST00000119084 Cep164Q5DU05 1446 aa15.5■□□□□ 0.07
Thbs3-202ENSMUST00000119084 Ercc6F8VPZ5 1481 aa15.5■□□□□ 0.07
Thbs3-202ENSMUST00000119084 Frmpd1A2AKB4 1549 aa15.49■□□□□ 0.07
Thbs3-202ENSMUST00000119084 Wdr66E9Q743 1299 aa15.49■□□□□ 0.07
Thbs3-202ENSMUST00000119084 Gab3Q8BSM5 595 aa15.44■□□□□ 0.06
Thbs3-202ENSMUST00000119084 Esf1Q3V1V3 845 aaKnown RBP15.41■□□□□ 0.06
Thbs3-202ENSMUST00000119084 CenpbP27790 599 aa15.4■□□□□ 0.06
Thbs3-202ENSMUST00000119084 Fmn1Q05860 1466 aa15.4■□□□□ 0.06
Thbs3-202ENSMUST00000119084 Rsf1E9PWW9 1441 aaKnown RBP15.38■□□□□ 0.05
Thbs3-202ENSMUST00000119084 Ube2uB1AUC4 352 aa15.38■□□□□ 0.05
Thbs3-202ENSMUST00000119084 Cc2d2aQ8CFW7 1633 aa15.37■□□□□ 0.05
Thbs3-202ENSMUST00000119084 TnnQ80Z71 1560 aa15.36■□□□□ 0.05
Thbs3-202ENSMUST00000119084 Unc13aQ4KUS2 1712 aa15.35■□□□□ 0.05
Thbs3-202ENSMUST00000119084 Ccdc88bQ4QRL3 1481 aa15.34■□□□□ 0.05
Thbs3-202ENSMUST00000119084 Fam135aQ6NS59 1506 aa15.3■□□□□ 0.04
Thbs3-202ENSMUST00000119084 Lamc3Q9R0B6 1581 aa15.3■□□□□ 0.04
Thbs3-202ENSMUST00000119084 Baz1bQ9Z277 1479 aa15.29■□□□□ 0.04
Thbs3-202ENSMUST00000119084 Anks4bQ8K3X6 423 aa15.29■□□□□ 0.04
Thbs3-202ENSMUST00000119084 Mier1Q5UAK0 511 aa15.28■□□□□ 0.04
Thbs3-202ENSMUST00000119084 Phldb1Q6PDH0 1371 aaKnown RBP15.25■□□□□ 0.03
Thbs3-202ENSMUST00000119084 Top2aQ01320 1528 aaKnown RBP15.25■□□□□ 0.03
Thbs3-202ENSMUST00000119084 Chic1Q8CBW7 227 aa15.22■□□□□ 0.03
Thbs3-202ENSMUST00000119084 Aebp2Q9Z248 504 aaKnown RBP15.2■□□□□ 0.02
Thbs3-202ENSMUST00000119084 Cdk11bP24788 784 aaKnown RBP15.17■□□□□ 0.02
Thbs3-202ENSMUST00000119084 Nop58Q6DFW4 536 aaKnown RBP15.16■□□□□ 0.02
Thbs3-202ENSMUST00000119084 Mapk8ip2Q9ERE9 830 aa15.15■□□□□ 0.02
Thbs3-202ENSMUST00000119084 NefmP08553 848 aa15.11■□□□□ 0.01
Thbs3-202ENSMUST00000119084 Kif15Q6P9L6 1387 aa15.08■□□□□ 0
Thbs3-202ENSMUST00000119084 Bcl11aQ9QYE3 773 aa15.07■□□□□ 0
Thbs3-202ENSMUST00000119084 Camsap1A2AHC3 1581 aa15.06■□□□□ 0
Thbs3-202ENSMUST00000119084 UbtfP25976 765 aaKnown RBP15.06■□□□□ 0
Thbs3-202ENSMUST00000119084 Rapgef2Q8CHG7 1496 aa15.04■□□□□ -0
Thbs3-202ENSMUST00000119084 Aplp2Q06335 707 aa15.04■□□□□ -0
Thbs3-202ENSMUST00000119084 SafbD3YXK2 937 aaKnown RBP15.01□□□□□ -0.01
Thbs3-202ENSMUST00000119084 Ccdc18Q640L5 1455 aa15□□□□□ -0.01
Thbs3-202ENSMUST00000119084 Fam71e1A1L3C1 212 aa14.99□□□□□ -0.01
Thbs3-202ENSMUST00000119084 Ifnlr1Q8CGK5 535 aa14.97□□□□□ -0.01
Thbs3-202ENSMUST00000119084 Ttbk1Q6PCN3 1308 aa14.97□□□□□ -0.01
Thbs3-202ENSMUST00000119084 NrkQ9R0G8 1455 aa14.96□□□□□ -0.01
Thbs3-202ENSMUST00000119084 Eif4g1Q6NZJ6 1600 aaKnown RBP14.95□□□□□ -0.02
Thbs3-202ENSMUST00000119084 Ubl4bQ9CQ84 188 aa14.94□□□□□ -0.02
Thbs3-202ENSMUST00000119084 Cux2P70298 1426 aa14.94□□□□□ -0.02
Thbs3-202ENSMUST00000119084 PrkcshO08795 521 aa14.93□□□□□ -0.02
Thbs3-202ENSMUST00000119084 Myt1Q8CFC2 1127 aa14.92□□□□□ -0.02
Thbs3-202ENSMUST00000119084 Grin2bQ01097 1482 aa14.91□□□□□ -0.02
Thbs3-202ENSMUST00000119084 Ap3b1Q9Z1T1 1105 aa14.89□□□□□ -0.03
Thbs3-202ENSMUST00000119084 Shroom4Q1W617 1475 aa14.88□□□□□ -0.03
Thbs3-202ENSMUST00000119084 Mrc2Q64449 1479 aa14.87□□□□□ -0.03
Thbs3-202ENSMUST00000119084 CatipB9EKE5 520 aa14.87□□□□□ -0.03
Thbs3-202ENSMUST00000119084 Cep162Q6ZQ06 1403 aa14.86□□□□□ -0.03
Thbs3-202ENSMUST00000119084 Plppr3Q7TPB0 716 aa14.83□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 658.2 ms