RNA–Protein interactions for RNA: ENSMUST00000117341.1

Spg20-203, mousemouse

TSL 1 (best) BASIC

Gene Spg20, Length 2,957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spg20-203ENSMUST00000117341 Rpgrip1Q9EPQ2 1331 aa18.69■□□□□ 0.58
Spg20-203ENSMUST00000117341 NischQ80TM9 1593 aa18.04■□□□□ 0.48
Spg20-203ENSMUST00000117341 Pcgf6Q99NA9 353 aa17.83■□□□□ 0.45
Spg20-203ENSMUST00000117341 Acin1Q9JIX8 1338 aaKnown RBP17.78■□□□□ 0.44
Spg20-203ENSMUST00000117341 Gm35339A0A140LHH9 1649 aa17.74■□□□□ 0.43
Spg20-203ENSMUST00000117341 Rtl1Q7M732 1744 aa17.57■□□□□ 0.4
Spg20-203ENSMUST00000117341 Ccdc180J3QNE4 1664 aa17.44■□□□□ 0.38
Spg20-203ENSMUST00000117341 Abcc9P70170 1546 aa17.44■□□□□ 0.38
Spg20-203ENSMUST00000117341 Myt1Q8CFC2 1127 aa17.32■□□□□ 0.36
Spg20-203ENSMUST00000117341 DiexfQ8BTT6 772 aaKnown RBP17.3■□□□□ 0.36
Spg20-203ENSMUST00000117341 Las1lA2BE28 776 aaKnown RBP17.28■□□□□ 0.36
Spg20-203ENSMUST00000117341 Abcc8B2RUS7 1588 aa17.21■□□□□ 0.35
Spg20-203ENSMUST00000117341 Neurod1Q60867 357 aa17.18■□□□□ 0.34
Spg20-203ENSMUST00000117341 Trim41Q5NCC3 630 aa17.13■□□□□ 0.33
Spg20-203ENSMUST00000117341 CenpbP27790 599 aa17.11■□□□□ 0.33
Spg20-203ENSMUST00000117341 Supt5hO55201 1082 aaKnown RBP17■□□□□ 0.31
Spg20-203ENSMUST00000117341 1700123L14RikQ3V2K7 440 aa16.96■□□□□ 0.31
Spg20-203ENSMUST00000117341 Dcaf1Q80TR8 1506 aa16.94■□□□□ 0.3
Spg20-203ENSMUST00000117341 Rhox8Q6VSS7 320 aa16.93■□□□□ 0.3
Spg20-203ENSMUST00000117341 Bcl11aQ9QYE3 773 aa16.8■□□□□ 0.28
Spg20-203ENSMUST00000117341 Ehmt2Q9Z148 1263 aaKnown RBP16.77■□□□□ 0.28
Spg20-203ENSMUST00000117341 Anks4bQ8K3X6 423 aa16.65■□□□□ 0.26
Spg20-203ENSMUST00000117341 Csrnp3P59055 597 aa16.61■□□□□ 0.25
Spg20-203ENSMUST00000117341 Amer1Q7TS75 1132 aa16.59■□□□□ 0.25
Spg20-203ENSMUST00000117341 Zcchc6Q5BLK4 1491 aaKnown RBP16.58■□□□□ 0.25
Spg20-203ENSMUST00000117341 Aplp2Q06335 707 aa16.58■□□□□ 0.24
Spg20-203ENSMUST00000117341 PrkcshO08795 521 aa16.46■□□□□ 0.23
Spg20-203ENSMUST00000117341 HrcG5E8J6 738 aa16.35■□□□□ 0.21
Spg20-203ENSMUST00000117341 ScribQ80U72 1612 aa16.3■□□□□ 0.2
Spg20-203ENSMUST00000117341 Cngb1E1AZ71 1325 aa16.26■□□□□ 0.19
Spg20-203ENSMUST00000117341 Sall2Q9QX96 1004 aa16.2■□□□□ 0.18
Spg20-203ENSMUST00000117341 Zeb1Q64318 1117 aa16.12■□□□□ 0.17
Spg20-203ENSMUST00000117341 NefmP08553 848 aa16.02■□□□□ 0.16
Spg20-203ENSMUST00000117341 Cdk11bP24788 784 aaKnown RBP15.97■□□□□ 0.15
Spg20-203ENSMUST00000117341 Gm38655A0A286YDK6 273 aa15.94■□□□□ 0.14
Spg20-203ENSMUST00000117341 Fam71e1A1L3C1 212 aa15.93■□□□□ 0.14
Spg20-203ENSMUST00000117341 Ifnlr1Q8CGK5 535 aa15.93■□□□□ 0.14
Spg20-203ENSMUST00000117341 Kdm5dQ62240 1548 aa15.89■□□□□ 0.14
Spg20-203ENSMUST00000117341 Nop58Q6DFW4 536 aaKnown RBP15.86■□□□□ 0.13
Spg20-203ENSMUST00000117341 Rb1cc1Q9ESK9 1588 aa15.79■□□□□ 0.12
Spg20-203ENSMUST00000117341 Ccdc136Q3TVA9 1136 aa15.78■□□□□ 0.12
Spg20-203ENSMUST00000117341 Plppr3Q7TPB0 716 aa15.75■□□□□ 0.11
Spg20-203ENSMUST00000117341 NacadQ5SWP3 1504 aa15.73■□□□□ 0.11
Spg20-203ENSMUST00000117341 CatipB9EKE5 520 aa15.72■□□□□ 0.11
Spg20-203ENSMUST00000117341 Pknox2Q8BG99 474 aa15.66■□□□□ 0.1
Spg20-203ENSMUST00000117341 ClspnQ80YR7 1315 aa15.66■□□□□ 0.1
Spg20-203ENSMUST00000117341 Rtl5Q5DTT4 599 aa15.65■□□□□ 0.1
Spg20-203ENSMUST00000117341 Mier1Q5UAK0 511 aa15.63■□□□□ 0.09
Spg20-203ENSMUST00000117341 Hdac5Q9Z2V6 1113 aa15.6■□□□□ 0.09
Spg20-203ENSMUST00000117341 Aebp2Q9Z248 504 aaKnown RBP15.59■□□□□ 0.09
Spg20-203ENSMUST00000117341 Mapk8ip2Q9ERE9 830 aa15.57■□□□□ 0.08
Spg20-203ENSMUST00000117341 Wdr66E9Q743 1299 aa15.56■□□□□ 0.08
Spg20-203ENSMUST00000117341 Fgd1P52734 960 aa15.56■□□□□ 0.08
Spg20-203ENSMUST00000117341 Cep164Q5DU05 1446 aa15.56■□□□□ 0.08
Spg20-203ENSMUST00000117341 Baz1aO88379 1555 aa15.53■□□□□ 0.08
Spg20-203ENSMUST00000117341 SafbD3YXK2 937 aaKnown RBP15.51■□□□□ 0.07
Spg20-203ENSMUST00000117341 Tnnt3Q9QZ47 272 aa15.51■□□□□ 0.07
Spg20-203ENSMUST00000117341 NrdcQ8BHG1 1161 aa15.48■□□□□ 0.07
Spg20-203ENSMUST00000117341 Hnrnpul2Q00PI9 745 aaKnown RBP15.46■□□□□ 0.07
Spg20-203ENSMUST00000117341 Anp32aO35381 247 aa15.45■□□□□ 0.06
Spg20-203ENSMUST00000117341 Ttbk1Q6PCN3 1308 aa15.44■□□□□ 0.06
Spg20-203ENSMUST00000117341 Sycp2Q9CUU3 1500 aa15.43■□□□□ 0.06
Spg20-203ENSMUST00000117341 Pelp1Q9DBD5 1123 aaKnown RBP15.37■□□□□ 0.05
Spg20-203ENSMUST00000117341 Gtf3c5Q8R2T8 520 aa15.29■□□□□ 0.04
Spg20-203ENSMUST00000117341 Gtf3c3Q3TMP1 882 aa15.28■□□□□ 0.04
Spg20-203ENSMUST00000117341 Ppargc1bQ8VHJ7 1014 aa15.22■□□□□ 0.03
Spg20-203ENSMUST00000117341 Upf2A2AT37 1269 aaKnown RBP15.21■□□□□ 0.03
Spg20-203ENSMUST00000117341 BicraF8VPZ9 1578 aa15.2■□□□□ 0.02
Spg20-203ENSMUST00000117341 Plcd4Q8K3R3 807 aa15.18■□□□□ 0.02
Spg20-203ENSMUST00000117341 Ccdc9Q8VC31 543 aaKnown RBP15.18■□□□□ 0.02
Spg20-203ENSMUST00000117341 Crybg2B7ZCC2 1516 aa15.18■□□□□ 0.02
Spg20-203ENSMUST00000117341 Nolc1E9Q5C9 702 aaKnown RBP15.18■□□□□ 0.02
Spg20-203ENSMUST00000117341 BccipQ9CWI3 316 aa15.16■□□□□ 0.02
Spg20-203ENSMUST00000117341 Smarca2Q6DIC0 1577 aa15.15■□□□□ 0.02
Spg20-203ENSMUST00000117341 Supt16hQ920B9 1047 aa15.13■□□□□ 0.01
Spg20-203ENSMUST00000117341 Irx3P81067 507 aa15.11■□□□□ 0.01
Spg20-203ENSMUST00000117341 Il27Q8K3I6 234 aa15.11■□□□□ 0.01
Spg20-203ENSMUST00000117341 TonslQ6NZL6 1363 aa15.07■□□□□ 0
Spg20-203ENSMUST00000117341 Cecr2E9Q2Z1 1453 aa15.06■□□□□ 0
Spg20-203ENSMUST00000117341 Ccdc27Q3V036 639 aa15.06■□□□□ 0
Spg20-203ENSMUST00000117341 Znf710Q3U288 666 aa15.05■□□□□ 0
Spg20-203ENSMUST00000117341 Ipo4Q8VI75 1082 aa15.05■□□□□ 0
Spg20-203ENSMUST00000117341 Ap3b1Q9Z1T1 1105 aa15□□□□□ -0.01
Spg20-203ENSMUST00000117341 Calr4Q3TQS0 420 aa14.95□□□□□ -0.02
Spg20-203ENSMUST00000117341 Zfp777B9EKF4 885 aa14.94□□□□□ -0.02
Spg20-203ENSMUST00000117341 TimelessQ9R1X4 1197 aa14.94□□□□□ -0.02
Spg20-203ENSMUST00000117341 Scaf1Q5U4C3 1256 aaKnown RBP14.93□□□□□ -0.02
Spg20-203ENSMUST00000117341 Esf1Q3V1V3 845 aaKnown RBP14.92□□□□□ -0.02
Spg20-203ENSMUST00000117341 Stra8P70278 393 aa14.9□□□□□ -0.02
Spg20-203ENSMUST00000117341 Gab3Q8BSM5 595 aa14.88□□□□□ -0.03
Spg20-203ENSMUST00000117341 Rsf1E9PWW9 1441 aaKnown RBP14.88□□□□□ -0.03
Spg20-203ENSMUST00000117341 Kcnn1Q9EQR3 537 aa14.86□□□□□ -0.03
Spg20-203ENSMUST00000117341 Eif5bQ05D44 1216 aaKnown RBP14.86□□□□□ -0.03
Spg20-203ENSMUST00000117341 Znf316Q6PGE4 1016 aa14.86□□□□□ -0.03
Spg20-203ENSMUST00000117341 Hsp90aa1P07901 733 aaKnown RBP14.85□□□□□ -0.03
Spg20-203ENSMUST00000117341 Washc2Q6PGL7 1334 aa14.82□□□□□ -0.04
Spg20-203ENSMUST00000117341 UbtfP25976 765 aaKnown RBP14.81□□□□□ -0.04
Spg20-203ENSMUST00000117341 Synj1Q8CHC4 1574 aa14.78□□□□□ -0.04
Spg20-203ENSMUST00000117341 Pak3Q61036 559 aa14.78□□□□□ -0.04
Spg20-203ENSMUST00000117341 Chic1Q8CBW7 227 aa14.78□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 150 ms