RNA–Protein interactions for RNA: ENSMUST00000112645.7

Trf-203, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trf, Length 2,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trf-203ENSMUST00000112645 NischQ80TM9 1593 aa23.71■■□□□ 1.39
Trf-203ENSMUST00000112645 Gm35339A0A140LHH9 1649 aa23.5■■□□□ 1.35
Trf-203ENSMUST00000112645 Abcc9P70170 1546 aa23.03■■□□□ 1.28
Trf-203ENSMUST00000112645 Abcc8B2RUS7 1588 aa22.54■■□□□ 1.2
Trf-203ENSMUST00000112645 Rhox8Q6VSS7 320 aa21.92■■□□□ 1.1
Trf-203ENSMUST00000112645 Rtl1Q7M732 1744 aa21.45■■□□□ 1.03
Trf-203ENSMUST00000112645 ScribQ80U72 1612 aa21.26■□□□□ 0.99
Trf-203ENSMUST00000112645 Ccdc180J3QNE4 1664 aa21.06■□□□□ 0.96
Trf-203ENSMUST00000112645 Dcaf1Q80TR8 1506 aa20.97■□□□□ 0.95
Trf-203ENSMUST00000112645 Zcchc6Q5BLK4 1491 aaKnown RBP20.84■□□□□ 0.93
Trf-203ENSMUST00000112645 Rb1cc1Q9ESK9 1588 aa20.81■□□□□ 0.92
Trf-203ENSMUST00000112645 Kdm5dQ62240 1548 aa20.75■□□□□ 0.91
Trf-203ENSMUST00000112645 NacadQ5SWP3 1504 aa20.72■□□□□ 0.91
Trf-203ENSMUST00000112645 Baz1aO88379 1555 aa20.52■□□□□ 0.88
Trf-203ENSMUST00000112645 Ccdc136Q3TVA9 1136 aa20.36■□□□□ 0.85
Trf-203ENSMUST00000112645 Sycp2Q9CUU3 1500 aa20.27■□□□□ 0.84
Trf-203ENSMUST00000112645 Crybg2B7ZCC2 1516 aa20.14■□□□□ 0.81
Trf-203ENSMUST00000112645 Smarca2Q6DIC0 1577 aa20.07■□□□□ 0.8
Trf-203ENSMUST00000112645 HrcG5E8J6 738 aa19.99■□□□□ 0.79
Trf-203ENSMUST00000112645 BicraF8VPZ9 1578 aa19.84■□□□□ 0.77
Trf-203ENSMUST00000112645 Trim41Q5NCC3 630 aa19.79■□□□□ 0.76
Trf-203ENSMUST00000112645 Ehmt2Q9Z148 1263 aaKnown RBP19.75■□□□□ 0.75
Trf-203ENSMUST00000112645 Cecr2E9Q2Z1 1453 aa19.66■□□□□ 0.74
Trf-203ENSMUST00000112645 Rpgrip1Q9EPQ2 1331 aa19.54■□□□□ 0.72
Trf-203ENSMUST00000112645 Cep164Q5DU05 1446 aa19.53■□□□□ 0.72
Trf-203ENSMUST00000112645 Brd4Q9ESU6 1400 aaKnown RBP19.5■□□□□ 0.71
Trf-203ENSMUST00000112645 Acin1Q9JIX8 1338 aaKnown RBP19.5■□□□□ 0.71
Trf-203ENSMUST00000112645 Synj1Q8CHC4 1574 aa19.49■□□□□ 0.71
Trf-203ENSMUST00000112645 Cngb1E1AZ71 1325 aa19.48■□□□□ 0.71
Trf-203ENSMUST00000112645 Rsf1E9PWW9 1441 aaKnown RBP19.41■□□□□ 0.7
Trf-203ENSMUST00000112645 Chic1Q8CBW7 227 aa19.39■□□□□ 0.69
Trf-203ENSMUST00000112645 Golga3P55937 1487 aa19.33■□□□□ 0.69
Trf-203ENSMUST00000112645 Ccdc88bQ4QRL3 1481 aa19.31■□□□□ 0.68
Trf-203ENSMUST00000112645 CftrP26361 1476 aa19.3■□□□□ 0.68
Trf-203ENSMUST00000112645 Smarca4Q3TKT4 1613 aaKnown RBP19.28■□□□□ 0.68
Trf-203ENSMUST00000112645 Gab3Q8BSM5 595 aa19.24■□□□□ 0.67
Trf-203ENSMUST00000112645 Cttnbp2B9EJA2 1648 aa19.21■□□□□ 0.67
Trf-203ENSMUST00000112645 Pds5bQ4VA53 1446 aaKnown RBP19.18■□□□□ 0.66
Trf-203ENSMUST00000112645 Esf1Q3V1V3 845 aaKnown RBP19.17■□□□□ 0.66
Trf-203ENSMUST00000112645 Top2bQ64511 1612 aa19.16■□□□□ 0.66
Trf-203ENSMUST00000112645 Atad2bE9Q166 1460 aaKnown RBP19.14■□□□□ 0.65
Trf-203ENSMUST00000112645 Cc2d2aQ8CFW7 1633 aa19.08■□□□□ 0.64
Trf-203ENSMUST00000112645 Iqgap2Q3UQ44 1575 aa19.07■□□□□ 0.64
Trf-203ENSMUST00000112645 Ercc6F8VPZ5 1481 aa18.82■□□□□ 0.6
Trf-203ENSMUST00000112645 Fmn1Q05860 1466 aa18.81■□□□□ 0.6
Trf-203ENSMUST00000112645 Wdr62Q3U3T8 1523 aa18.78■□□□□ 0.6
Trf-203ENSMUST00000112645 Top2aQ01320 1528 aaKnown RBP18.77■□□□□ 0.6
Trf-203ENSMUST00000112645 Frmpd1A2AKB4 1549 aa18.74■□□□□ 0.59
Trf-203ENSMUST00000112645 Rapgef2Q8CHG7 1496 aa18.73■□□□□ 0.59
Trf-203ENSMUST00000112645 Thoc2B1AZI6 1594 aaKnown RBP18.72■□□□□ 0.59
Trf-203ENSMUST00000112645 Pcgf6Q99NA9 353 aa18.64■□□□□ 0.57
Trf-203ENSMUST00000112645 Mier1Q5UAK0 511 aa18.6■□□□□ 0.57
Trf-203ENSMUST00000112645 Cep162Q6ZQ06 1403 aa18.58■□□□□ 0.56
Trf-203ENSMUST00000112645 TnnQ80Z71 1560 aa18.57■□□□□ 0.56
Trf-203ENSMUST00000112645 Myt1lP97500 1187 aa18.54■□□□□ 0.56
Trf-203ENSMUST00000112645 Unc13aQ4KUS2 1712 aa18.52■□□□□ 0.56
Trf-203ENSMUST00000112645 Phldb1Q6PDH0 1371 aaKnown RBP18.49■□□□□ 0.55
Trf-203ENSMUST00000112645 Supt5hO55201 1082 aaKnown RBP18.49■□□□□ 0.55
Trf-203ENSMUST00000112645 Npm2Q80W85 207 aa18.48■□□□□ 0.55
Trf-203ENSMUST00000112645 Eif4g1Q6NZJ6 1600 aaKnown RBP18.47■□□□□ 0.55
Trf-203ENSMUST00000112645 Fam135aQ6NS59 1506 aa18.45■□□□□ 0.54
Trf-203ENSMUST00000112645 UbtfP25976 765 aaKnown RBP18.44■□□□□ 0.54
Trf-203ENSMUST00000112645 Lamc3Q9R0B6 1581 aa18.41■□□□□ 0.54
Trf-203ENSMUST00000112645 Zeb1Q64318 1117 aa18.39■□□□□ 0.53
Trf-203ENSMUST00000112645 PtprkP35822 1457 aa18.36■□□□□ 0.53
Trf-203ENSMUST00000112645 NefmP08553 848 aa18.36■□□□□ 0.53
Trf-203ENSMUST00000112645 Kif15Q6P9L6 1387 aa18.34■□□□□ 0.53
Trf-203ENSMUST00000112645 Il27Q8K3I6 234 aa18.33■□□□□ 0.53
Trf-203ENSMUST00000112645 Arhgap35Q91YM2 1499 aa18.31■□□□□ 0.52
Trf-203ENSMUST00000112645 Camsap1A2AHC3 1581 aa18.29■□□□□ 0.52
Trf-203ENSMUST00000112645 Ubl4bQ9CQ84 188 aa18.28■□□□□ 0.52
Trf-203ENSMUST00000112645 Clip1Q922J3 1391 aa18.28■□□□□ 0.52
Trf-203ENSMUST00000112645 Baz1bQ9Z277 1479 aa18.27■□□□□ 0.52
Trf-203ENSMUST00000112645 NrkQ9R0G8 1455 aa18.25■□□□□ 0.51
Trf-203ENSMUST00000112645 Plekhg3Q4VAC9 1341 aa18.25■□□□□ 0.51
Trf-203ENSMUST00000112645 Shroom4Q1W617 1475 aa18.2■□□□□ 0.5
Trf-203ENSMUST00000112645 Dnajc5bQ9CQ94 199 aa18.17■□□□□ 0.5
Trf-203ENSMUST00000112645 Ccdc18Q640L5 1455 aa18.16■□□□□ 0.5
Trf-203ENSMUST00000112645 Cux2P70298 1426 aa18.16■□□□□ 0.5
Trf-203ENSMUST00000112645 Arap1Q4LDD4 1452 aa18.15■□□□□ 0.5
Trf-203ENSMUST00000112645 Grin2bQ01097 1482 aa18.13■□□□□ 0.49
Trf-203ENSMUST00000112645 Ap3b1Q9Z1T1 1105 aa18.11■□□□□ 0.49
Trf-203ENSMUST00000112645 Sall2Q9QX96 1004 aa18.08■□□□□ 0.48
Trf-203ENSMUST00000112645 Map3k1P53349 1493 aa18.07■□□□□ 0.48
Trf-203ENSMUST00000112645 Eea1Q8BL66 1411 aa18.07■□□□□ 0.48
Trf-203ENSMUST00000112645 Ncapd3Q6ZQK0 1506 aa18.06■□□□□ 0.48
Trf-203ENSMUST00000112645 Npm1Q61937 292 aaKnown RBP18.04■□□□□ 0.48
Trf-203ENSMUST00000112645 Arhgef5E9Q7D5 1581 aa18.04■□□□□ 0.48
Trf-203ENSMUST00000112645 Mrc2Q64449 1479 aa18.04■□□□□ 0.48
Trf-203ENSMUST00000112645 Setd5Q5XJV7 1441 aa18.03■□□□□ 0.48
Trf-203ENSMUST00000112645 Mroh2bQ7M6Y6 1581 aa18.01■□□□□ 0.47
Trf-203ENSMUST00000112645 Ankrd26Q811D2 1581 aa17.98■□□□□ 0.47
Trf-203ENSMUST00000112645 Aebp2Q9Z248 504 aaKnown RBP17.97■□□□□ 0.47
Trf-203ENSMUST00000112645 Erich3F6QRE9 1637 aa17.95■□□□□ 0.46
Trf-203ENSMUST00000112645 Las1lA2BE28 776 aaKnown RBP17.93■□□□□ 0.46
Trf-203ENSMUST00000112645 Tiam1Q60610 1591 aa17.93■□□□□ 0.46
Trf-203ENSMUST00000112645 LrpprcQ6PB66 1392 aaKnown RBP17.92■□□□□ 0.46
Trf-203ENSMUST00000112645 AqrQ8CFQ3 1481 aaKnown RBP17.92■□□□□ 0.46
Trf-203ENSMUST00000112645 Pcf11G3X9Z4 1553 aa17.91■□□□□ 0.46
Trf-203ENSMUST00000112645 Wdr66E9Q743 1299 aa17.91■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms