RNA–Protein interactions for RNA: ENSMUST00000110054.7

Use1-203, Transcript of Vesicle transport protein USE1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Use1, Length 973 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Use1-203ENSMUST00000110054 Gm35339A0A140LHH9 1649 aa23.07■■□□□ 1.28
Use1-203ENSMUST00000110054 NischQ80TM9 1593 aa22.72■■□□□ 1.23
Use1-203ENSMUST00000110054 Abcc9P70170 1546 aa22.02■■□□□ 1.12
Use1-203ENSMUST00000110054 Abcc8B2RUS7 1588 aa21.87■■□□□ 1.09
Use1-203ENSMUST00000110054 ScribQ80U72 1612 aa21.04■□□□□ 0.96
Use1-203ENSMUST00000110054 NacadQ5SWP3 1504 aa20.37■□□□□ 0.85
Use1-203ENSMUST00000110054 Kdm5dQ62240 1548 aa20.36■□□□□ 0.85
Use1-203ENSMUST00000110054 Dcaf1Q80TR8 1506 aa20.25■□□□□ 0.83
Use1-203ENSMUST00000110054 Sycp2Q9CUU3 1500 aa19.95■□□□□ 0.78
Use1-203ENSMUST00000110054 Rb1cc1Q9ESK9 1588 aa19.86■□□□□ 0.77
Use1-203ENSMUST00000110054 Ccdc180J3QNE4 1664 aa19.78■□□□□ 0.76
Use1-203ENSMUST00000110054 Rhox8Q6VSS7 320 aa19.67■□□□□ 0.74
Use1-203ENSMUST00000110054 BicraF8VPZ9 1578 aa19.64■□□□□ 0.73
Use1-203ENSMUST00000110054 Baz1aO88379 1555 aa19.58■□□□□ 0.73
Use1-203ENSMUST00000110054 Crybg2B7ZCC2 1516 aa19.46■□□□□ 0.71
Use1-203ENSMUST00000110054 Zcchc6Q5BLK4 1491 aaKnown RBP19.18■□□□□ 0.66
Use1-203ENSMUST00000110054 Rtl1Q7M732 1744 aa19.14■□□□□ 0.66
Use1-203ENSMUST00000110054 Pds5bQ4VA53 1446 aaKnown RBP19.06■□□□□ 0.64
Use1-203ENSMUST00000110054 Smarca2Q6DIC0 1577 aa19.02■□□□□ 0.64
Use1-203ENSMUST00000110054 Atad2bE9Q166 1460 aaKnown RBP18.9■□□□□ 0.62
Use1-203ENSMUST00000110054 Smarca4Q3TKT4 1613 aaKnown RBP18.89■□□□□ 0.62
Use1-203ENSMUST00000110054 Thoc2B1AZI6 1594 aaKnown RBP18.89■□□□□ 0.61
Use1-203ENSMUST00000110054 Cecr2E9Q2Z1 1453 aa18.75■□□□□ 0.59
Use1-203ENSMUST00000110054 Iqgap2Q3UQ44 1575 aa18.75■□□□□ 0.59
Use1-203ENSMUST00000110054 Ercc6F8VPZ5 1481 aa18.71■□□□□ 0.59
Use1-203ENSMUST00000110054 Dnajc5bQ9CQ94 199 aa18.6■□□□□ 0.57
Use1-203ENSMUST00000110054 Cc2d2aQ8CFW7 1633 aa18.57■□□□□ 0.56
Use1-203ENSMUST00000110054 Wdr62Q3U3T8 1523 aa18.54■□□□□ 0.56
Use1-203ENSMUST00000110054 Cttnbp2B9EJA2 1648 aa18.54■□□□□ 0.56
Use1-203ENSMUST00000110054 Fam135aQ6NS59 1506 aa18.49■□□□□ 0.55
Use1-203ENSMUST00000110054 Frmpd1A2AKB4 1549 aa18.46■□□□□ 0.55
Use1-203ENSMUST00000110054 Brd4Q9ESU6 1400 aaKnown RBP18.46■□□□□ 0.55
Use1-203ENSMUST00000110054 Synj1Q8CHC4 1574 aa18.43■□□□□ 0.54
Use1-203ENSMUST00000110054 CftrP26361 1476 aa18.41■□□□□ 0.54
Use1-203ENSMUST00000110054 Unc13aQ4KUS2 1712 aa18.41■□□□□ 0.54
Use1-203ENSMUST00000110054 Baz1bQ9Z277 1479 aa18.35■□□□□ 0.53
Use1-203ENSMUST00000110054 Ccdc136Q3TVA9 1136 aa18.34■□□□□ 0.53
Use1-203ENSMUST00000110054 Phldb1Q6PDH0 1371 aaKnown RBP18.3■□□□□ 0.52
Use1-203ENSMUST00000110054 Trim41Q5NCC3 630 aa18.16■□□□□ 0.5
Use1-203ENSMUST00000110054 Ubl4bQ9CQ84 188 aa18.06■□□□□ 0.48
Use1-203ENSMUST00000110054 Esf1Q3V1V3 845 aaKnown RBP18.05■□□□□ 0.48
Use1-203ENSMUST00000110054 Mrc2Q64449 1479 aa18.02■□□□□ 0.48
Use1-203ENSMUST00000110054 Rsf1E9PWW9 1441 aaKnown RBP17.93■□□□□ 0.46
Use1-203ENSMUST00000110054 Top2bQ64511 1612 aa17.91■□□□□ 0.46
Use1-203ENSMUST00000110054 Lamc3Q9R0B6 1581 aa17.91■□□□□ 0.46
Use1-203ENSMUST00000110054 Golga3P55937 1487 aa17.86■□□□□ 0.45
Use1-203ENSMUST00000110054 Kif15Q6P9L6 1387 aa17.84■□□□□ 0.45
Use1-203ENSMUST00000110054 TnnQ80Z71 1560 aa17.79■□□□□ 0.44
Use1-203ENSMUST00000110054 Cux2P70298 1426 aa17.79■□□□□ 0.44
Use1-203ENSMUST00000110054 Kif21aQ9QXL2 1672 aa17.74■□□□□ 0.43
Use1-203ENSMUST00000110054 Cngb1E1AZ71 1325 aa17.71■□□□□ 0.42
Use1-203ENSMUST00000110054 Lrriq1Q0P5X1 1673 aa17.69■□□□□ 0.42
Use1-203ENSMUST00000110054 Fmn1Q05860 1466 aa17.66■□□□□ 0.42
Use1-203ENSMUST00000110054 Ccdc18Q640L5 1455 aa17.63■□□□□ 0.41
Use1-203ENSMUST00000110054 Cep164Q5DU05 1446 aa17.62■□□□□ 0.41
Use1-203ENSMUST00000110054 Camsap1A2AHC3 1581 aa17.62■□□□□ 0.41
Use1-203ENSMUST00000110054 Npm1Q61937 292 aaKnown RBP17.59■□□□□ 0.41
Use1-203ENSMUST00000110054 Crocc2F6XLV1 1638 aa17.48■□□□□ 0.39
Use1-203ENSMUST00000110054 Eif4g3Q80XI3 1579 aaKnown RBP17.45■□□□□ 0.38
Use1-203ENSMUST00000110054 LrpprcQ6PB66 1392 aaKnown RBP17.43■□□□□ 0.38
Use1-203ENSMUST00000110054 Il27Q8K3I6 234 aa17.43■□□□□ 0.38
Use1-203ENSMUST00000110054 Dhx29Q6PGC1 1365 aaKnown RBP17.42■□□□□ 0.38
Use1-203ENSMUST00000110054 Urb2E9Q7L1 1524 aaKnown RBP17.37■□□□□ 0.37
Use1-203ENSMUST00000110054 PogzQ8BZH4 1409 aaKnown RBP17.37■□□□□ 0.37
Use1-203ENSMUST00000110054 Ccdc88bQ4QRL3 1481 aa17.37■□□□□ 0.37
Use1-203ENSMUST00000110054 Top2aQ01320 1528 aaKnown RBP17.37■□□□□ 0.37
Use1-203ENSMUST00000110054 Grin2bQ01097 1482 aa17.34■□□□□ 0.37
Use1-203ENSMUST00000110054 Plb1Q3TTY0 1478 aa17.32■□□□□ 0.36
Use1-203ENSMUST00000110054 Duox2A2AQ99 1517 aa17.29■□□□□ 0.36
Use1-203ENSMUST00000110054 Ift140E9PY46 1464 aa17.26■□□□□ 0.35
Use1-203ENSMUST00000110054 Pbrm1Q8BSQ9 1634 aaKnown RBP17.26■□□□□ 0.35
Use1-203ENSMUST00000110054 Setd1bQ8CFT2 1985 aa17.22■□□□□ 0.35
Use1-203ENSMUST00000110054 Samd9lQ69Z37 1561 aa17.22■□□□□ 0.35
Use1-203ENSMUST00000110054 NrkQ9R0G8 1455 aa17.21■□□□□ 0.35
Use1-203ENSMUST00000110054 Efcab5A0JP43 1406 aa17.2■□□□□ 0.34
Use1-203ENSMUST00000110054 Rusc2Q80U22 1514 aa17.19■□□□□ 0.34
Use1-203ENSMUST00000110054 Chic1Q8CBW7 227 aa17.17■□□□□ 0.34
Use1-203ENSMUST00000110054 Shroom4Q1W617 1475 aa17.14■□□□□ 0.33
Use1-203ENSMUST00000110054 HrcG5E8J6 738 aa17.09■□□□□ 0.33
Use1-203ENSMUST00000110054 Disp1Q3TDN0 1521 aa17.09■□□□□ 0.33
Use1-203ENSMUST00000110054 Nup160Q9Z0W3 1402 aaKnown RBP17.05■□□□□ 0.32
Use1-203ENSMUST00000110054 SynmQ70IV5 1561 aa17.04■□□□□ 0.32
Use1-203ENSMUST00000110054 Gpatch8A2A6A1 1505 aa17.04■□□□□ 0.32
Use1-203ENSMUST00000110054 Shroom2A2ALU4 1481 aa17.04■□□□□ 0.32
Use1-203ENSMUST00000110054 PtprkP35822 1457 aa17.03■□□□□ 0.32
Use1-203ENSMUST00000110054 Cc2d2bA0A286YDU8 1405 aa17.03■□□□□ 0.32
Use1-203ENSMUST00000110054 Grin2aP35436 1464 aa17.01■□□□□ 0.31
Use1-203ENSMUST00000110054 Rad54l2Q99NG0 1466 aa17■□□□□ 0.31
Use1-203ENSMUST00000110054 Magi3Q9EQJ9 1476 aa17■□□□□ 0.31
Use1-203ENSMUST00000110054 AqrQ8CFQ3 1481 aaKnown RBP16.94■□□□□ 0.3
Use1-203ENSMUST00000110054 Pla2r1Q62028 1487 aa16.93■□□□□ 0.3
Use1-203ENSMUST00000110054 Mroh2bQ7M6Y6 1581 aa16.9■□□□□ 0.3
Use1-203ENSMUST00000110054 Zeb1Q64318 1117 aa16.9■□□□□ 0.3
Use1-203ENSMUST00000110054 Npm2Q80W85 207 aa16.9■□□□□ 0.3
Use1-203ENSMUST00000110054 Rapgef2Q8CHG7 1496 aa16.86■□□□□ 0.29
Use1-203ENSMUST00000110054 Map3k1P53349 1493 aa16.84■□□□□ 0.29
Use1-203ENSMUST00000110054 Abca16E9PWJ7 1678 aa16.84■□□□□ 0.29
Use1-203ENSMUST00000110054 TchhA0A0B4J1F9 1599 aa16.83■□□□□ 0.28
Use1-203ENSMUST00000110054 Eif4g1Q6NZJ6 1600 aaKnown RBP16.83■□□□□ 0.28
Use1-203ENSMUST00000110054 Pabpn1Q8CCS6 302 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms